RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 LAYNQ6UX15 382 aa18.12■□□□□ 0.49
LSM5-204ENST00000409909 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.12■□□□□ 0.49
LSM5-204ENST00000409909 DSG4Q86SJ6 1040 aa18.12■□□□□ 0.49
LSM5-204ENST00000409909 PYROXD2Q8N2H3 581 aa18.12■□□□□ 0.49
LSM5-204ENST00000409909 OR2A12Q8NGT7 310 aa18.12■□□□□ 0.49
LSM5-204ENST00000409909 OR14C36Q8NHC7 312 aa18.12■□□□□ 0.49
LSM5-204ENST00000409909 NTAN1Q96AB6 310 aa18.12■□□□□ 0.49
LSM5-204ENST00000409909 CABIN1Q9Y6J0 2220 aa18.11■□□□□ 0.49
LSM5-204ENST00000409909 EPG5Q9HCE0 2579 aa18.11■□□□□ 0.49
LSM5-204ENST00000409909 LRRC72A6NJI9 287 aa18.11■□□□□ 0.49
LSM5-204ENST00000409909 RNF103O00237 685 aa18.11■□□□□ 0.49
LSM5-204ENST00000409909 ALOX15BO15296 676 aa18.11■□□□□ 0.49
LSM5-204ENST00000409909 RTN2O75298 545 aa18.11■□□□□ 0.49
LSM5-204ENST00000409909 ZNF821O75541 412 aaPredicted RBP18.11■□□□□ 0.49
LSM5-204ENST00000409909 LRIG2O94898 1065 aa18.11■□□□□ 0.49
LSM5-204ENST00000409909 RHOQP17081 205 aa18.11■□□□□ 0.49
LSM5-204ENST00000409909 ACVRL1P37023 503 aa18.11■□□□□ 0.49
LSM5-204ENST00000409909 PRKCIP41743 596 aa18.11■□□□□ 0.49
LSM5-204ENST00000409909 FANCCQ00597 558 aa18.11■□□□□ 0.49
LSM5-204ENST00000409909 ZNF252P-AS1Q0IIN9 211 aa18.11■□□□□ 0.49
LSM5-204ENST00000409909 SCAPQ12770 1279 aa18.11■□□□□ 0.49
LSM5-204ENST00000409909 CNTN1Q12860 1018 aa18.11■□□□□ 0.49
LSM5-204ENST00000409909 SLC14A1Q13336 389 aa18.11■□□□□ 0.49
LSM5-204ENST00000409909 KIF19Q2TAC6 998 aa18.11■□□□□ 0.49
LSM5-204ENST00000409909 HLA-BQ31612 363 aa18.11■□□□□ 0.49
LSM5-204ENST00000409909 POM121L1PQ3SYA9 428 aa18.11■□□□□ 0.49
LSM5-204ENST00000409909 KCNT1Q5JUK3 1230 aa18.11■□□□□ 0.49
LSM5-204ENST00000409909 PIP4K2CQ8TBX8 421 aa18.11■□□□□ 0.49
LSM5-204ENST00000409909 VCPIP1Q96JH7 1222 aa18.11■□□□□ 0.49
LSM5-204ENST00000409909 CNPY3Q9BT09 278 aa18.11■□□□□ 0.49
LSM5-204ENST00000409909 ACE2Q9BYF1 805 aaPredicted RBP18.11■□□□□ 0.49
LSM5-204ENST00000409909 EDEM3Q9BZQ6 932 aa18.11■□□□□ 0.49
LSM5-204ENST00000409909 GAREM1Q9H706 876 aa18.11■□□□□ 0.49
LSM5-204ENST00000409909 ATP13A1Q9HD20 1204 aa18.11■□□□□ 0.49
LSM5-204ENST00000409909 ACTL7AQ9Y615 435 aa18.11■□□□□ 0.49
LSM5-204ENST00000409909 PLXNA2O75051 1894 aa18.11■□□□□ 0.49
LSM5-204ENST00000409909 CHD5Q8TDI0 1954 aa18.11■□□□□ 0.49
LSM5-204ENST00000409909 AKAP13Q12802 2813 aa18.1■□□□□ 0.49
LSM5-204ENST00000409909 A0A1W2PPC4 97 aa18.1■□□□□ 0.49
LSM5-204ENST00000409909 DDX3XO00571 662 aaKnown RBP eCLIP18.1■□□□□ 0.492e-12■■■■□ 20.9
LSM5-204ENST00000409909 ATMINO43313 823 aaPredicted RBP18.1■□□□□ 0.49
LSM5-204ENST00000409909 CD160O95971 181 aa18.1■□□□□ 0.49
LSM5-204ENST00000409909 SKILP12757 684 aa18.1■□□□□ 0.49
LSM5-204ENST00000409909 PBX1P40424 430 aa18.1■□□□□ 0.49
LSM5-204ENST00000409909 CCR5P51681 352 aa18.1■□□□□ 0.49
LSM5-204ENST00000409909 CLCN6P51797 869 aa18.1■□□□□ 0.49
LSM5-204ENST00000409909 FAM193AP78312 1265 aa18.1■□□□□ 0.49
LSM5-204ENST00000409909 ARF5P84085 180 aa18.1■□□□□ 0.49
LSM5-204ENST00000409909 MAMLD1Q13495 774 aa18.1■□□□□ 0.49
LSM5-204ENST00000409909 FAM46CQ5VWP2 391 aa18.1■□□□□ 0.49
LSM5-204ENST00000409909 SCYL2Q6P3W7 929 aa18.1■□□□□ 0.49
LSM5-204ENST00000409909 SLFN11Q7Z7L1 901 aa18.1■□□□□ 0.49
LSM5-204ENST00000409909 CHST14Q8NCH0 376 aa18.1■□□□□ 0.49
LSM5-204ENST00000409909 CAMK1GQ96NX5 476 aa18.1■□□□□ 0.49
LSM5-204ENST00000409909 TNKS2Q9H2K2 1166 aa18.1■□□□□ 0.49
LSM5-204ENST00000409909 SLC32A1Q9H598 525 aa18.1■□□□□ 0.49
LSM5-204ENST00000409909 TMEM248Q9NWD8 314 aa18.1■□□□□ 0.49
LSM5-204ENST00000409909 DNAI1Q9UI46 699 aa18.1■□□□□ 0.49
LSM5-204ENST00000409909 ANKRD6Q9Y2G4 727 aa18.1■□□□□ 0.49
LSM5-204ENST00000409909 FNDC3AQ9Y2H6 1198 aaKnown RBP18.1■□□□□ 0.49
LSM5-204ENST00000409909 SNX11Q9Y5W9 270 aa18.1■□□□□ 0.49
LSM5-204ENST00000409909 TBC1D3DA0A087WVF3 549 aa18.09■□□□□ 0.49
LSM5-204ENST00000409909 TBC1D3IA0A087WXS9 549 aa18.09■□□□□ 0.49
LSM5-204ENST00000409909 TBC1D3EA0A087X179 549 aa18.09■□□□□ 0.49
LSM5-204ENST00000409909 TBC1D3KA0A087X1G2 549 aa18.09■□□□□ 0.49
LSM5-204ENST00000409909 SPAARA0A1B0GVQ0 90 aa18.09■□□□□ 0.49
LSM5-204ENST00000409909 ANKRD62A6NC57 917 aa18.09■□□□□ 0.49
LSM5-204ENST00000409909 TBC1D3FA6NER0 549 aaPredicted RBP18.09■□□□□ 0.49
LSM5-204ENST00000409909 TBC1D3LB9A6J9 549 aa18.09■□□□□ 0.49
LSM5-204ENST00000409909 WNT9AO14904 365 aa18.09■□□□□ 0.49
LSM5-204ENST00000409909 SH3BP5O60239 455 aa18.09■□□□□ 0.49
LSM5-204ENST00000409909 TBC1D3HP0C7X1 549 aa18.09■□□□□ 0.49
LSM5-204ENST00000409909 CHRNA3P32297 505 aa18.09■□□□□ 0.49
LSM5-204ENST00000409909 GRIA4P48058 902 aa18.09■□□□□ 0.49
LSM5-204ENST00000409909 MAPKAPK2P49137 400 aa18.09■□□□□ 0.49
LSM5-204ENST00000409909 SERPINH1P50454 418 aaKnown RBP18.09■□□□□ 0.49
LSM5-204ENST00000409909 PPP2CBP62714 309 aa18.09■□□□□ 0.49
LSM5-204ENST00000409909 PPP2CAP67775 309 aa18.09■□□□□ 0.49
LSM5-204ENST00000409909 ZSCAN23Q3MJ62 389 aa18.09■□□□□ 0.49
LSM5-204ENST00000409909 FIGNQ5HY92 759 aa18.09■□□□□ 0.49
LSM5-204ENST00000409909 AGBL4Q5VU57 503 aa18.09■□□□□ 0.49
LSM5-204ENST00000409909 TBC1D3GQ6DHY5 549 aa18.09■□□□□ 0.49
LSM5-204ENST00000409909 TBC1D3CQ6IPX1 549 aa18.09■□□□□ 0.49
LSM5-204ENST00000409909 PLEKHA7Q6IQ23 1121 aa18.09■□□□□ 0.49
LSM5-204ENST00000409909 RETSATQ6NUM9 610 aa18.09■□□□□ 0.49
LSM5-204ENST00000409909 C22orf39Q6P5X5 142 aa18.09■□□□□ 0.49
LSM5-204ENST00000409909 DCUN1D2Q6PH85 259 aa18.09■□□□□ 0.49
LSM5-204ENST00000409909 IL27RAQ6UWB1 636 aa18.09■□□□□ 0.49
LSM5-204ENST00000409909 TBC1D3Q8IZP1 549 aaPredicted RBP18.09■□□□□ 0.49
LSM5-204ENST00000409909 ARHGEF2Q92974 986 aaKnown RBP18.09■□□□□ 0.49
LSM5-204ENST00000409909 TBC1D31Q96DN5 1066 aa18.09■□□□□ 0.49
LSM5-204ENST00000409909 SLC6A18Q96N87 628 aa18.09■□□□□ 0.49
LSM5-204ENST00000409909 CNTNAP3BQ96NU0 1288 aa18.09■□□□□ 0.49
LSM5-204ENST00000409909 CNTNAP3Q9BZ76 1288 aa18.09■□□□□ 0.49
LSM5-204ENST00000409909 RETREG1Q9H6L5 497 aa18.09■□□□□ 0.49
LSM5-204ENST00000409909 FZD10Q9ULW2 581 aa18.09■□□□□ 0.49
LSM5-204ENST00000409909 DOCK9Q9BZ29 2069 aa18.09■□□□□ 0.49
LSM5-204ENST00000409909 TMEM131Q92545 1883 aa18.08■□□□□ 0.49
LSM5-204ENST00000409909 C1QTNF3-AMACRE9PGA6 284 aa18.08■□□□□ 0.48
LSM5-204ENST00000409909 KCNK3O14649 394 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms