RNA–Protein interactions for RNA: ENST00000409754.5

LIMS2-206, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LIMS2, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-206ENST00000409754 PPARDQ03181 441 aa14.37□□□□□ -0.11
LIMS2-206ENST00000409754 PLD1Q13393 1074 aa14.37□□□□□ -0.11
LIMS2-206ENST00000409754 SPARCL1Q14515 664 aa14.37□□□□□ -0.11
LIMS2-206ENST00000409754 TMC7Q7Z402 723 aa14.37□□□□□ -0.11
LIMS2-206ENST00000409754 TFAP2DQ7Z6R9 452 aa14.37□□□□□ -0.11
LIMS2-206ENST00000409754 DNAJB7Q7Z6W7 309 aaPredicted RBP14.37□□□□□ -0.11
LIMS2-206ENST00000409754 PRPF39Q86UA1 669 aaKnown RBP14.37□□□□□ -0.11
LIMS2-206ENST00000409754 SLC26A11Q86WA9 606 aa14.37□□□□□ -0.11
LIMS2-206ENST00000409754 BCAS4Q8TDM0 211 aa14.37□□□□□ -0.11
LIMS2-206ENST00000409754 USP33Q8TEY7 942 aa14.37□□□□□ -0.11
LIMS2-206ENST00000409754 PSMG2Q969U7 264 aa14.37□□□□□ -0.11
LIMS2-206ENST00000409754 MRRFQ96E11 262 aaKnown RBP14.37□□□□□ -0.11
LIMS2-206ENST00000409754 RPRD1AQ96P16 312 aaPredicted RBP14.37□□□□□ -0.11
LIMS2-206ENST00000409754 TRABDQ9H4I3 376 aa14.37□□□□□ -0.11
LIMS2-206ENST00000409754 NSUN3Q9H649 340 aaKnown RBP14.37□□□□□ -0.11
LIMS2-206ENST00000409754 CCDC134Q9H6E4 229 aa14.37□□□□□ -0.11
LIMS2-206ENST00000409754 GLOD4Q9HC38 313 aa14.37□□□□□ -0.11
LIMS2-206ENST00000409754 SSU72Q9NP77 194 aaKnown RBP14.37□□□□□ -0.11
LIMS2-206ENST00000409754 KCNK9Q9NPC2 374 aa14.37□□□□□ -0.11
LIMS2-206ENST00000409754 PPANQ9NQ55 473 aaKnown RBP14.37□□□□□ -0.11
LIMS2-206ENST00000409754 ENTPD7Q9NQZ7 604 aa14.37□□□□□ -0.11
LIMS2-206ENST00000409754 ZNF180Q9UJW8 692 aa14.37□□□□□ -0.11
LIMS2-206ENST00000409754 AAR2Q9Y312 384 aaKnown RBP14.37□□□□□ -0.11
LIMS2-206ENST00000409754 IKBKGQ9Y6K9 419 aa14.37□□□□□ -0.11
LIMS2-206ENST00000409754 DOCK4Q8N1I0 1966 aa14.37□□□□□ -0.11
LIMS2-206ENST00000409754 SHROOM3Q8TF72 1996 aa14.36□□□□□ -0.11
LIMS2-206ENST00000409754 IQANK1A0A1B0GTG1 560 aa14.36□□□□□ -0.11
LIMS2-206ENST00000409754 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.36□□□□□ -0.11
LIMS2-206ENST00000409754 GMNCA6NCL1 334 aa14.36□□□□□ -0.11
LIMS2-206ENST00000409754 ERICH4A6NGS2 130 aa14.36□□□□□ -0.11
LIMS2-206ENST00000409754 FAM159BA6NKW6 160 aa14.36□□□□□ -0.11
LIMS2-206ENST00000409754 F5H5T6 163 aa14.36□□□□□ -0.11
LIMS2-206ENST00000409754 PRPF4O43172 522 aaKnown RBP eCLIP14.36□□□□□ -0.11
LIMS2-206ENST00000409754 ALDH1A2O94788 518 aa14.36□□□□□ -0.11
LIMS2-206ENST00000409754 OAS1P00973 400 aaKnown RBP14.36□□□□□ -0.11
LIMS2-206ENST00000409754 SLC11A2P49281 568 aa14.36□□□□□ -0.11
LIMS2-206ENST00000409754 ZSCAN26Q16670 478 aa14.36□□□□□ -0.11
LIMS2-206ENST00000409754 DUSP6Q16828 381 aa14.36□□□□□ -0.11
LIMS2-206ENST00000409754 LRRC6Q86X45 466 aa14.36□□□□□ -0.11
LIMS2-206ENST00000409754 MICALL1Q8N3F8 863 aa14.36□□□□□ -0.11
LIMS2-206ENST00000409754 OR52K1Q8NGK4 314 aa14.36□□□□□ -0.11
LIMS2-206ENST00000409754 MZB1Q8WU39 189 aa14.36□□□□□ -0.11
LIMS2-206ENST00000409754 HMCESQ96FZ2 354 aa14.36□□□□□ -0.11
LIMS2-206ENST00000409754 SMC6Q96SB8 1091 aa14.36□□□□□ -0.11
LIMS2-206ENST00000409754 PRDM6Q9NQX0 595 aa14.36□□□□□ -0.11
LIMS2-206ENST00000409754 MOCS1Q9NZB8 636 aa14.36□□□□□ -0.11
LIMS2-206ENST00000409754 BFARQ9NZS9 450 aa14.36□□□□□ -0.11
LIMS2-206ENST00000409754 SMG5Q9UPR3 1016 aaKnown RBP14.36□□□□□ -0.11
LIMS2-206ENST00000409754 MTCL1Q9Y4B5 1905 aaKnown RBP14.35□□□□□ -0.11
LIMS2-206ENST00000409754 GOLGA6L7A0A1B0GV03 622 aa14.35□□□□□ -0.11
LIMS2-206ENST00000409754 FAM47DPA6NHR8 397 aa14.35□□□□□ -0.11
LIMS2-206ENST00000409754 ANXA9O76027 345 aa14.35□□□□□ -0.11
LIMS2-206ENST00000409754 CXCL14O95715 111 aa14.35□□□□□ -0.11
LIMS2-206ENST00000409754 PEX11BO96011 259 aa14.35□□□□□ -0.11
LIMS2-206ENST00000409754 LTBRP36941 435 aa14.35□□□□□ -0.11
LIMS2-206ENST00000409754 NRIP1P48552 1158 aa14.35□□□□□ -0.11
LIMS2-206ENST00000409754 YBEYP58557 167 aaPredicted RBP14.35□□□□□ -0.11
LIMS2-206ENST00000409754 DLX2Q07687 328 aaPredicted RBP14.35□□□□□ -0.11
LIMS2-206ENST00000409754 HNRNPDQ14103 355 aaKnown RBP14.35□□□□□ -0.11
LIMS2-206ENST00000409754 CCDC85BQ15834 202 aaPredicted RBP14.35□□□□□ -0.11
LIMS2-206ENST00000409754 PARP15Q460N3 678 aa14.35□□□□□ -0.11
LIMS2-206ENST00000409754 FAM133BQ5BKY9 247 aaKnown RBP14.35□□□□□ -0.11
LIMS2-206ENST00000409754 NAPEPLDQ6IQ20 393 aa14.35□□□□□ -0.11
LIMS2-206ENST00000409754 CASC4Q6P4E1 433 aa14.35□□□□□ -0.11
LIMS2-206ENST00000409754 OTOP3Q7RTS5 596 aa14.35□□□□□ -0.11
LIMS2-206ENST00000409754 LINC00523Q86TU6 105 aa14.35□□□□□ -0.11
LIMS2-206ENST00000409754 RBM23Q86U06 439 aaKnown RBP14.35□□□□□ -0.11
LIMS2-206ENST00000409754 ITIH5Q86UX2 942 aa14.35□□□□□ -0.11
LIMS2-206ENST00000409754 TTC17Q96AE7 1141 aa14.35□□□□□ -0.11
LIMS2-206ENST00000409754 OXNAD1Q96HP4 312 aaPredicted RBP14.35□□□□□ -0.11
LIMS2-206ENST00000409754 RBM22Q9NW64 420 aaKnown RBP eCLIP14.35□□□□□ -0.11
LIMS2-206ENST00000409754 SYBUQ9NX95 663 aa14.35□□□□□ -0.11
LIMS2-206ENST00000409754 NKIRAS1Q9NYS0 192 aa14.35□□□□□ -0.11
LIMS2-206ENST00000409754 ASB3Q9Y575 518 aa14.35□□□□□ -0.11
LIMS2-206ENST00000409754 NYNRINQ9P2P1 1898 aaKnown RBP14.35□□□□□ -0.11
LIMS2-206ENST00000409754 CXorf49A8MYA2 514 aaPredicted RBP14.34□□□□□ -0.11
LIMS2-206ENST00000409754 RAMP2O60895 175 aa14.34□□□□□ -0.11
LIMS2-206ENST00000409754 CLASP2O75122 1294 aaKnown RBP14.34□□□□□ -0.11
LIMS2-206ENST00000409754 TBX10O75333 385 aa14.34□□□□□ -0.11
LIMS2-206ENST00000409754 PIAS1O75925 651 aa14.34□□□□□ -0.11
LIMS2-206ENST00000409754 FAM107AO95990 144 aa14.34□□□□□ -0.11
LIMS2-206ENST00000409754 HLA-DQB2P05538 268 aa14.34□□□□□ -0.11
LIMS2-206ENST00000409754 NPY2RP49146 381 aa14.34□□□□□ -0.11
LIMS2-206ENST00000409754 RENBPP51606 427 aa14.34□□□□□ -0.11
LIMS2-206ENST00000409754 SEC24CP53992 1094 aa14.34□□□□□ -0.11
LIMS2-206ENST00000409754 GEMP55040 296 aa14.34□□□□□ -0.11
LIMS2-206ENST00000409754 TNK2Q07912 1038 aa14.34□□□□□ -0.11
LIMS2-206ENST00000409754 MPP2Q14168 576 aa14.34□□□□□ -0.11
LIMS2-206ENST00000409754 CTC1Q2NKJ3 1217 aa14.34□□□□□ -0.11
LIMS2-206ENST00000409754 ZNF449Q6P9G9 518 aa14.34□□□□□ -0.11
LIMS2-206ENST00000409754 CTAGE3PQ8IX95 158 aa14.34□□□□□ -0.11
LIMS2-206ENST00000409754 LGI2Q8N0V4 545 aa14.34□□□□□ -0.11
LIMS2-206ENST00000409754 PPM1NQ8N819 430 aa14.34□□□□□ -0.11
LIMS2-206ENST00000409754 MAFAQ8NHW3 353 aaPredicted RBP14.34□□□□□ -0.11
LIMS2-206ENST00000409754 SLC22A17Q8WUG5 538 aa14.34□□□□□ -0.11
LIMS2-206ENST00000409754 ZNF419Q96HQ0 510 aaPredicted RBP14.34□□□□□ -0.11
LIMS2-206ENST00000409754 SGSM3Q96HU1 749 aa14.34□□□□□ -0.11
LIMS2-206ENST00000409754 KLHL5Q96PQ7 755 aa14.34□□□□□ -0.11
LIMS2-206ENST00000409754 CCT8L2Q96SF2 557 aa14.34□□□□□ -0.11
LIMS2-206ENST00000409754 TRIM56Q9BRZ2 755 aaKnown RBP14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms