RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 DDR2Q16832 855 aa17.04■□□□□ 0.32
PCDHA13-202ENST00000409494 ECHDC2Q86YB7 292 aa17.04■□□□□ 0.32
PCDHA13-202ENST00000409494 CENPTQ96BT3 561 aa17.04■□□□□ 0.32
PCDHA13-202ENST00000409494 FAM126AQ9BYI3 521 aaPredicted RBP17.04■□□□□ 0.32
PCDHA13-202ENST00000409494 DCLRE1BQ9H816 532 aa17.04■□□□□ 0.32
PCDHA13-202ENST00000409494 GNPTGQ9UJJ9 305 aa17.04■□□□□ 0.32
PCDHA13-202ENST00000409494 GGA2Q9UJY4 613 aa17.04■□□□□ 0.32
PCDHA13-202ENST00000409494 ENO4A6NNW6 628 aa17.04■□□□□ 0.32
PCDHA13-202ENST00000409494 F2P00734 622 aa17.04■□□□□ 0.32
PCDHA13-202ENST00000409494 PTPN2P17706 415 aa17.04■□□□□ 0.32
PCDHA13-202ENST00000409494 CXCR2P25025 360 aa17.04■□□□□ 0.32
PCDHA13-202ENST00000409494 SLC20A2Q08357 652 aa17.04■□□□□ 0.32
PCDHA13-202ENST00000409494 PAGE2BQ5JRK9 111 aa17.04■□□□□ 0.32
PCDHA13-202ENST00000409494 LDLRAD1Q5T700 205 aa17.04■□□□□ 0.32
PCDHA13-202ENST00000409494 AMIGO3Q86WK7 504 aa17.04■□□□□ 0.32
PCDHA13-202ENST00000409494 SMG7Q92540 1137 aaKnown RBP17.04■□□□□ 0.32
PCDHA13-202ENST00000409494 RIPOR3Q96MK2 946 aa17.04■□□□□ 0.32
PCDHA13-202ENST00000409494 NEUROG2Q9H2A3 272 aa17.04■□□□□ 0.32
PCDHA13-202ENST00000409494 MLNP12872 115 aa17.04■□□□□ 0.32
PCDHA13-202ENST00000409494 PRIM2P49643 509 aa17.04■□□□□ 0.32
PCDHA13-202ENST00000409494 RCN1Q15293 331 aa17.04■□□□□ 0.32
PCDHA13-202ENST00000409494 CYP2A13Q16696 494 aa17.04■□□□□ 0.32
PCDHA13-202ENST00000409494 SLC10A6Q3KNW5 377 aa17.04■□□□□ 0.32
PCDHA13-202ENST00000409494 PTPN20Q4JDL3 420 aa17.04■□□□□ 0.32
PCDHA13-202ENST00000409494 DLGAP2Q9P1A6 1054 aa17.04■□□□□ 0.32
PCDHA13-202ENST00000409494 DOT1LQ8TEK3 1739 aa17.03■□□□□ 0.32
PCDHA13-202ENST00000409494 DHX15O43143 795 aaKnown RBP17.03■□□□□ 0.32
PCDHA13-202ENST00000409494 LCA5LO95447 670 aa17.03■□□□□ 0.32
PCDHA13-202ENST00000409494 RIN3Q8TB24 985 aa17.03■□□□□ 0.32
PCDHA13-202ENST00000409494 EIF2AQ9BY44 585 aaKnown RBP17.03■□□□□ 0.32
PCDHA13-202ENST00000409494 ARIH1Q9Y4X5 557 aaPredicted RBP17.03■□□□□ 0.32
PCDHA13-202ENST00000409494 CLTBP09497 229 aa17.03■□□□□ 0.32
PCDHA13-202ENST00000409494 MAPKAPK2P49137 400 aa17.03■□□□□ 0.32
PCDHA13-202ENST00000409494 C12orf29Q8N999 325 aa17.03■□□□□ 0.32
PCDHA13-202ENST00000409494 ZNF555Q8NEP9 628 aa17.03■□□□□ 0.32
PCDHA13-202ENST00000409494 PLD4Q96BZ4 506 aa17.03■□□□□ 0.32
PCDHA13-202ENST00000409494 PPP1R36Q96LQ0 422 aa17.03■□□□□ 0.32
PCDHA13-202ENST00000409494 PCDH18Q9HCL0 1135 aa17.03■□□□□ 0.32
PCDHA13-202ENST00000409494 THAP1Q9NVV9 213 aa17.03■□□□□ 0.32
PCDHA13-202ENST00000409494 NUDT5Q9UKK9 219 aa17.03■□□□□ 0.32
PCDHA13-202ENST00000409494 RGPD1P0DJD0 1748 aa17.03■□□□□ 0.32
PCDHA13-202ENST00000409494 AIM2O14862 343 aa17.03■□□□□ 0.32
PCDHA13-202ENST00000409494 FTH1P02794 183 aa17.03■□□□□ 0.32
PCDHA13-202ENST00000409494 LPOP22079 712 aaPredicted RBP17.03■□□□□ 0.32
PCDHA13-202ENST00000409494 EEF1DP29692 281 aaKnown RBP17.03■□□□□ 0.32
PCDHA13-202ENST00000409494 L1CAMP32004 1257 aa17.03■□□□□ 0.32
PCDHA13-202ENST00000409494 HADHBP55084 474 aaKnown RBP17.03■□□□□ 0.32
PCDHA13-202ENST00000409494 CCDC33Q8N5R6 958 aa17.03■□□□□ 0.32
PCDHA13-202ENST00000409494 STAG3L4Q8TBR4 150 aa17.03■□□□□ 0.32
PCDHA13-202ENST00000409494 PTCD2Q8WV60 388 aaKnown RBP17.03■□□□□ 0.32
PCDHA13-202ENST00000409494 CCDC3Q9BQI4 270 aa17.03■□□□□ 0.32
PCDHA13-202ENST00000409494 TBC1D4O60343 1298 aa17.03■□□□□ 0.32
PCDHA13-202ENST00000409494 SLC10A3P09131 477 aa17.03■□□□□ 0.32
PCDHA13-202ENST00000409494 ATXN3P54252 364 aaPredicted RBP17.03■□□□□ 0.32
PCDHA13-202ENST00000409494 CDK18Q07002 472 aa17.03■□□□□ 0.32
PCDHA13-202ENST00000409494 CYLC2Q14093 348 aaPredicted RBP17.03■□□□□ 0.32
PCDHA13-202ENST00000409494 MTSS1LQ765P7 747 aa17.03■□□□□ 0.32
PCDHA13-202ENST00000409494 FUKQ8N0W3 1084 aa17.03■□□□□ 0.32
PCDHA13-202ENST00000409494 SEMA3CQ99985 751 aa17.03■□□□□ 0.32
PCDHA13-202ENST00000409494 C17orf80Q9BSJ5 609 aa17.03■□□□□ 0.32
PCDHA13-202ENST00000409494 ZDHHC6Q9H6R6 413 aa17.03■□□□□ 0.32
PCDHA13-202ENST00000409494 AGO1Q9UL18 857 aaKnown RBP17.03■□□□□ 0.32
PCDHA13-202ENST00000409494 CCDC85CA6NKD9 419 aa17.02■□□□□ 0.32
PCDHA13-202ENST00000409494 FKBP9O95302 570 aa17.02■□□□□ 0.32
PCDHA13-202ENST00000409494 ARIH2O95376 493 aa17.02■□□□□ 0.32
PCDHA13-202ENST00000409494 TPH1P17752 444 aa17.02■□□□□ 0.32
PCDHA13-202ENST00000409494 CCR3P51677 355 aa17.02■□□□□ 0.32
PCDHA13-202ENST00000409494 TARBP2Q15633 366 aaKnown RBP17.02■□□□□ 0.32
PCDHA13-202ENST00000409494 FKBP9P1Q75LS8 142 aa17.02■□□□□ 0.32
PCDHA13-202ENST00000409494 MTDHQ86UE4 582 aaKnown RBP17.02■□□□□ 0.32
PCDHA13-202ENST00000409494 FAM162AQ96A26 154 aa17.02■□□□□ 0.32
PCDHA13-202ENST00000409494 DEC1Q9P2X7 70 aa17.02■□□□□ 0.32
PCDHA13-202ENST00000409494 LOC100653049A0A140TA62 436 aa17.02■□□□□ 0.32
PCDHA13-202ENST00000409494 MAGEC1O60732 1142 aa17.02■□□□□ 0.32
PCDHA13-202ENST00000409494 KRT34O76011 436 aa17.02■□□□□ 0.32
PCDHA13-202ENST00000409494 ALADP13716 330 aa17.02■□□□□ 0.32
PCDHA13-202ENST00000409494 HTR1BP28222 390 aa17.02■□□□□ 0.32
PCDHA13-202ENST00000409494 PEX5P50542 639 aa17.02■□□□□ 0.32
PCDHA13-202ENST00000409494 HIRAP54198 1017 aaPredicted RBP17.02■□□□□ 0.32
PCDHA13-202ENST00000409494 FPGSQ05932 587 aa17.02■□□□□ 0.32
PCDHA13-202ENST00000409494 GPR158Q5T848 1215 aa17.02■□□□□ 0.32
PCDHA13-202ENST00000409494 GRAMD4Q6IC98 578 aa17.02■□□□□ 0.32
PCDHA13-202ENST00000409494 XYLT1Q86Y38 959 aa17.02■□□□□ 0.32
PCDHA13-202ENST00000409494 BBS7Q8IWZ6 715 aa17.02■□□□□ 0.32
PCDHA13-202ENST00000409494 RMDN2Q96LZ7 410 aa17.02■□□□□ 0.32
PCDHA13-202ENST00000409494 AURKCQ9UQB9 309 aa17.02■□□□□ 0.32
PCDHA13-202ENST00000409494 A0A0U1RQF3 1178 aa17.02■□□□□ 0.31
PCDHA13-202ENST00000409494 RPL22P35268 128 aaKnown RBP17.02■□□□□ 0.31
PCDHA13-202ENST00000409494 DDX39BQ13838 428 aaKnown RBP17.02■□□□□ 0.31
PCDHA13-202ENST00000409494 SYTL1Q8IYJ3 562 aa17.02■□□□□ 0.31
PCDHA13-202ENST00000409494 INSL6Q9Y581 213 aa17.02■□□□□ 0.31
PCDHA13-202ENST00000409494 PAGE1O75459 146 aa17.02■□□□□ 0.31
PCDHA13-202ENST00000409494 GJB6O95452 261 aa17.02■□□□□ 0.31
PCDHA13-202ENST00000409494 PSMB4P28070 264 aa17.02■□□□□ 0.31
PCDHA13-202ENST00000409494 PTPN4P29074 926 aa17.02■□□□□ 0.31
PCDHA13-202ENST00000409494 NCALDP61601 193 aa17.02■□□□□ 0.31
PCDHA13-202ENST00000409494 RPL7AP62424 266 aaKnown RBP17.02■□□□□ 0.31
PCDHA13-202ENST00000409494 VARS2Q5ST30 1063 aaKnown RBP17.02■□□□□ 0.31
PCDHA13-202ENST00000409494 PLPP4Q5VZY2 271 aa17.02■□□□□ 0.31
PCDHA13-202ENST00000409494 IQCKQ8N0W5 287 aa17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms