RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 ITM2CQ9NQX7 267 aa20.27■□□□□ 0.84
PDLIM2-207ENST00000409417 USP36Q9P275 1121 aaKnown RBP20.27■□□□□ 0.84
PDLIM2-207ENST00000409417 FAM186AA6NE01 2351 aa20.27■□□□□ 0.84
PDLIM2-207ENST00000409417 CHD5Q8TDI0 1954 aa20.27■□□□□ 0.84
PDLIM2-207ENST00000409417 PRR23AA6NEV1 266 aa20.26■□□□□ 0.83
PDLIM2-207ENST00000409417 ZSCAN5CA6NGD5 496 aaPredicted RBP20.26■□□□□ 0.83
PDLIM2-207ENST00000409417 BTNL10A8MVZ5 291 aa20.26■□□□□ 0.83
PDLIM2-207ENST00000409417 BUB1BO60566 1050 aaPredicted RBP20.26■□□□□ 0.83
PDLIM2-207ENST00000409417 ACADMP11310 421 aa20.26■□□□□ 0.83
PDLIM2-207ENST00000409417 TPMTP51580 245 aa20.26■□□□□ 0.83
PDLIM2-207ENST00000409417 PLK5Q496M5 336 aa20.26■□□□□ 0.83
PDLIM2-207ENST00000409417 Q6ZVU0 165 aa20.26■□□□□ 0.83
PDLIM2-207ENST00000409417 ZNF354CQ86Y25 554 aa20.26■□□□□ 0.83
PDLIM2-207ENST00000409417 MAP7D3Q8IWC1 876 aa20.26■□□□□ 0.83
PDLIM2-207ENST00000409417 STK40Q8N2I9 435 aa20.26■□□□□ 0.83
PDLIM2-207ENST00000409417 FAM160A2Q8N612 972 aaPredicted RBP20.26■□□□□ 0.83
PDLIM2-207ENST00000409417 FRMD1Q8N878 549 aa20.26■□□□□ 0.83
PDLIM2-207ENST00000409417 CEP44Q9C0F1 390 aa20.26■□□□□ 0.83
PDLIM2-207ENST00000409417 LACRTQ9GZZ8 138 aa20.26■□□□□ 0.83
PDLIM2-207ENST00000409417 MBD1Q9UIS9 605 aaPredicted RBP20.26■□□□□ 0.83
PDLIM2-207ENST00000409417 CYP8B1Q9UNU6 501 aa20.26■□□□□ 0.83
PDLIM2-207ENST00000409417 USP34Q70CQ2 3546 aa20.26■□□□□ 0.83
PDLIM2-207ENST00000409417 EML5Q05BV3 1969 aa20.26■□□□□ 0.83
PDLIM2-207ENST00000409417 PJA2O43164 708 aa20.25■□□□□ 0.83
PDLIM2-207ENST00000409417 CD160O95971 181 aa20.25■□□□□ 0.83
PDLIM2-207ENST00000409417 IGLV3-19P01714 112 aa20.25■□□□□ 0.83
PDLIM2-207ENST00000409417 CD48P09326 243 aa20.25■□□□□ 0.83
PDLIM2-207ENST00000409417 COMTP21964 271 aa20.25■□□□□ 0.83
PDLIM2-207ENST00000409417 AMPD1P23109 780 aa20.25■□□□□ 0.83
PDLIM2-207ENST00000409417 DPYSL3Q14195 570 aa20.25■□□□□ 0.83
PDLIM2-207ENST00000409417 LAIR1Q6GTX8 287 aa20.25■□□□□ 0.83
PDLIM2-207ENST00000409417 C22orf39Q6P5X5 142 aa20.25■□□□□ 0.83
PDLIM2-207ENST00000409417 TMCO3Q6UWJ1 677 aa20.25■□□□□ 0.83
PDLIM2-207ENST00000409417 KIAA1328Q86T90 577 aa20.25■□□□□ 0.83
PDLIM2-207ENST00000409417 CACUL1Q86Y37 369 aa20.25■□□□□ 0.83
PDLIM2-207ENST00000409417 TXLNBQ8N3L3 684 aa20.25■□□□□ 0.83
PDLIM2-207ENST00000409417 NPWQ8N729 165 aa20.25■□□□□ 0.83
PDLIM2-207ENST00000409417 CCDC112Q8NEF3 446 aa20.25■□□□□ 0.83
PDLIM2-207ENST00000409417 CELF6Q96J87 481 aaKnown RBP20.25■□□□□ 0.83
PDLIM2-207ENST00000409417 ZNF670Q9BS34 389 aa20.25■□□□□ 0.83
PDLIM2-207ENST00000409417 SALL4Q9UJQ4 1053 aa20.25■□□□□ 0.83
PDLIM2-207ENST00000409417 ALG6Q9Y672 507 aa20.25■□□□□ 0.83
PDLIM2-207ENST00000409417 DUSP10Q9Y6W6 482 aa20.25■□□□□ 0.83
PDLIM2-207ENST00000409417 GVINP1Q7Z2Y8 2422 aa20.25■□□□□ 0.83
PDLIM2-207ENST00000409417 SPAG17Q6Q759 2223 aa20.25■□□□□ 0.83
PDLIM2-207ENST00000409417 ABCA7Q8IZY2 2146 aa20.25■□□□□ 0.83
PDLIM2-207ENST00000409417 IGHV1OR15-9A0A0B4J2B8 117 aa20.24■□□□□ 0.83
PDLIM2-207ENST00000409417 ARHGAP42A6NI28 874 aa20.24■□□□□ 0.83
PDLIM2-207ENST00000409417 MCF2LO15068 1137 aa20.24■□□□□ 0.83
PDLIM2-207ENST00000409417 ALOX15BO15296 676 aa20.24■□□□□ 0.83
PDLIM2-207ENST00000409417 MAP3K13O43283 966 aa20.24■□□□□ 0.83
PDLIM2-207ENST00000409417 BUB1O43683 1085 aa20.24■□□□□ 0.83
PDLIM2-207ENST00000409417 SPOPO43791 374 aa20.24■□□□□ 0.83
PDLIM2-207ENST00000409417 ZNF821O75541 412 aaPredicted RBP20.24■□□□□ 0.83
PDLIM2-207ENST00000409417 BCKDHBP21953 392 aa20.24■□□□□ 0.83
PDLIM2-207ENST00000409417 ELF2Q15723 593 aa20.24■□□□□ 0.83
PDLIM2-207ENST00000409417 LPAL2Q16609 132 aa20.24■□□□□ 0.83
PDLIM2-207ENST00000409417 C11orf63Q6NUN7 778 aa20.24■□□□□ 0.83
PDLIM2-207ENST00000409417 SLC36A4Q6YBV0 504 aa20.24■□□□□ 0.83
PDLIM2-207ENST00000409417 ASCL5Q7RTU5 278 aa20.24■□□□□ 0.83
PDLIM2-207ENST00000409417 DSG4Q86SJ6 1040 aa20.24■□□□□ 0.83
PDLIM2-207ENST00000409417 MMAAQ8IVH4 418 aaKnown RBP20.24■□□□□ 0.83
PDLIM2-207ENST00000409417 ARHGAP12Q8IWW6 846 aa20.24■□□□□ 0.83
PDLIM2-207ENST00000409417 OR2A12Q8NGT7 310 aa20.24■□□□□ 0.83
PDLIM2-207ENST00000409417 TPCN2Q8NHX9 752 aa20.24■□□□□ 0.83
PDLIM2-207ENST00000409417 OR8D1Q8WZ84 308 aa20.24■□□□□ 0.83
PDLIM2-207ENST00000409417 ISG20Q96AZ6 181 aaKnown RBP20.24■□□□□ 0.83
PDLIM2-207ENST00000409417 CCDC114Q96M63 670 aa20.24■□□□□ 0.83
PDLIM2-207ENST00000409417 DESI2Q9BSY9 194 aa20.24■□□□□ 0.83
PDLIM2-207ENST00000409417 CALN1Q9BXU9 219 aa20.24■□□□□ 0.83
PDLIM2-207ENST00000409417 SLC39A8Q9C0K1 460 aa20.24■□□□□ 0.83
PDLIM2-207ENST00000409417 DUSP15Q9H1R2 295 aaPredicted RBP20.24■□□□□ 0.83
PDLIM2-207ENST00000409417 CD93Q9NPY3 652 aa20.24■□□□□ 0.83
PDLIM2-207ENST00000409417 ETNK2Q9NVF9 386 aa20.24■□□□□ 0.83
PDLIM2-207ENST00000409417 KLHL11Q9NVR0 708 aa20.24■□□□□ 0.83
PDLIM2-207ENST00000409417 SCML1Q9UN30 329 aa20.24■□□□□ 0.83
PDLIM2-207ENST00000409417 FARP1Q9Y4F1 1045 aaPredicted RBP20.24■□□□□ 0.83
PDLIM2-207ENST00000409417 RHOBTB1O94844 696 aa20.24■□□□□ 0.83
PDLIM2-207ENST00000409417 DNTTP04053 509 aa20.24■□□□□ 0.83
PDLIM2-207ENST00000409417 OXTRP30559 389 aa20.24■□□□□ 0.83
PDLIM2-207ENST00000409417 MRE11P49959 708 aa20.24■□□□□ 0.83
PDLIM2-207ENST00000409417 PAPOLAP51003 745 aaKnown RBP20.24■□□□□ 0.83
PDLIM2-207ENST00000409417 MMRN1Q13201 1228 aa20.24■□□□□ 0.83
PDLIM2-207ENST00000409417 CST6Q15828 149 aa20.24■□□□□ 0.83
PDLIM2-207ENST00000409417 TTC31Q49AM3 519 aaPredicted RBP20.24■□□□□ 0.83
PDLIM2-207ENST00000409417 INO80DQ53TQ3 878 aaPredicted RBP20.24■□□□□ 0.83
PDLIM2-207ENST00000409417 SPDYCQ5MJ68 293 aa20.24■□□□□ 0.83
PDLIM2-207ENST00000409417 ZFYVE27Q5T4F4 411 aa20.24■□□□□ 0.83
PDLIM2-207ENST00000409417 LRRC8AQ8IWT6 810 aa20.24■□□□□ 0.83
PDLIM2-207ENST00000409417 RHOT1Q8IXI2 618 aa20.24■□□□□ 0.83
PDLIM2-207ENST00000409417 PCDH20Q8N6Y1 951 aaKnown RBP20.24■□□□□ 0.83
PDLIM2-207ENST00000409417 CASKIN2Q8WXE0 1202 aa20.24■□□□□ 0.83
PDLIM2-207ENST00000409417 RAPGEF5Q92565 580 aa20.24■□□□□ 0.83
PDLIM2-207ENST00000409417 LOXL4Q96JB6 756 aa20.24■□□□□ 0.83
PDLIM2-207ENST00000409417 PABPC3Q9H361 631 aaKnown RBP20.24■□□□□ 0.83
PDLIM2-207ENST00000409417 PPM1HQ9ULR3 514 aa20.24■□□□□ 0.83
PDLIM2-207ENST00000409417 HYOU1Q9Y4L1 999 aa20.24■□□□□ 0.83
PDLIM2-207ENST00000409417 ACTL7AQ9Y615 435 aa20.24■□□□□ 0.83
PDLIM2-207ENST00000409417 NUP205Q92621 2012 aa20.24■□□□□ 0.83
PDLIM2-207ENST00000409417 GON4LQ3T8J9 2241 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms