RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 IFNA14P01570 189 aa17.92■□□□□ 0.46
SMPD4-202ENST00000409031 LPGAT1Q92604 370 aa17.92■□□□□ 0.46
SMPD4-202ENST00000409031 APOL5Q9BWW9 433 aa17.92■□□□□ 0.46
SMPD4-202ENST00000409031 SPRTNQ9H040 489 aaPredicted RBP17.92■□□□□ 0.46
SMPD4-202ENST00000409031 UBP1Q9NZI7 540 aa17.92■□□□□ 0.46
SMPD4-202ENST00000409031 MORF4L1Q9UBU8 362 aa17.92■□□□□ 0.46
SMPD4-202ENST00000409031 VPS72Q15906 364 aa17.92■□□□□ 0.46
SMPD4-202ENST00000409031 NPNTQ6UXI9 565 aa17.92■□□□□ 0.46
SMPD4-202ENST00000409031 NCCRP1Q6ZVX7 275 aaPredicted RBP17.92■□□□□ 0.46
SMPD4-202ENST00000409031 C12orf56Q8IXR9 622 aa17.92■□□□□ 0.46
SMPD4-202ENST00000409031 LRRC71Q8N4P6 559 aa17.92■□□□□ 0.46
SMPD4-202ENST00000409031 ZNF540Q8NDQ6 660 aa17.92■□□□□ 0.46
SMPD4-202ENST00000409031 HTRA1Q92743 480 aa17.92■□□□□ 0.46
SMPD4-202ENST00000409031 TADA1Q96BN2 335 aa17.92■□□□□ 0.46
SMPD4-202ENST00000409031 WDR55Q9H6Y2 383 aaPredicted RBP17.92■□□□□ 0.46
SMPD4-202ENST00000409031 PIDD1Q9HB75 910 aa17.92■□□□□ 0.46
SMPD4-202ENST00000409031 GNPTGQ9UJJ9 305 aa17.92■□□□□ 0.46
SMPD4-202ENST00000409031 KCNK1O00180 336 aa17.92■□□□□ 0.46
SMPD4-202ENST00000409031 PABPC4LP0CB38 370 aaKnown RBP17.92■□□□□ 0.46
SMPD4-202ENST00000409031 RAP1GAPP47736 663 aa17.92■□□□□ 0.46
SMPD4-202ENST00000409031 TSNQ15631 228 aaKnown RBP17.92■□□□□ 0.46
SMPD4-202ENST00000409031 AFG1LQ8WV93 481 aa17.92■□□□□ 0.46
SMPD4-202ENST00000409031 TEKT5Q96M29 485 aa17.92■□□□□ 0.46
SMPD4-202ENST00000409031 TBC1D13Q9NVG8 400 aa17.92■□□□□ 0.46
SMPD4-202ENST00000409031 SMPD3Q9NY59 655 aaPredicted RBP17.92■□□□□ 0.46
SMPD4-202ENST00000409031 USP21Q9UK80 565 aa17.92■□□□□ 0.46
SMPD4-202ENST00000409031 BARX2Q9UMQ3 279 aaPredicted RBP17.92■□□□□ 0.46
SMPD4-202ENST00000409031 PIPSLA2A3N6 862 aa17.92■□□□□ 0.46
SMPD4-202ENST00000409031 NCF1BA6NI72 391 aaPredicted RBP17.92■□□□□ 0.46
SMPD4-202ENST00000409031 NCF1CA8MVU1 366 aaPredicted RBP17.92■□□□□ 0.46
SMPD4-202ENST00000409031 GLP2RO95838 553 aa17.92■□□□□ 0.46
SMPD4-202ENST00000409031 NCF1P14598 390 aaPredicted RBP17.92■□□□□ 0.46
SMPD4-202ENST00000409031 SPDYE7PQ495Y7 208 aa17.92■□□□□ 0.46
SMPD4-202ENST00000409031 PKN3Q6P5Z2 889 aa17.92■□□□□ 0.46
SMPD4-202ENST00000409031 DRICH1Q6PGQ1 229 aaPredicted RBP17.92■□□□□ 0.46
SMPD4-202ENST00000409031 BRSK2Q8IWQ3 736 aa17.92■□□□□ 0.46
SMPD4-202ENST00000409031 EFHBQ8N7U6 833 aa17.92■□□□□ 0.46
SMPD4-202ENST00000409031 BLOC1S5Q8TDH9 187 aa17.92■□□□□ 0.46
SMPD4-202ENST00000409031 FGFBP2Q9BYJ0 223 aa17.92■□□□□ 0.46
SMPD4-202ENST00000409031 HDHD2Q9H0R4 259 aa17.92■□□□□ 0.46
SMPD4-202ENST00000409031 TSPAN16Q9UKR8 245 aa17.92■□□□□ 0.46
SMPD4-202ENST00000409031 BBIP1A8MTZ0 92 aa17.91■□□□□ 0.46
SMPD4-202ENST00000409031 PDLIM1O00151 329 aa17.91■□□□□ 0.46
SMPD4-202ENST00000409031 POLR2EP19388 210 aaKnown RBP17.91■□□□□ 0.46
SMPD4-202ENST00000409031 ETFBP38117 255 aa17.91■□□□□ 0.46
SMPD4-202ENST00000409031 ECM1Q16610 540 aa17.91■□□□□ 0.46
SMPD4-202ENST00000409031 TSEN34Q9BSV6 310 aaKnown RBP17.91■□□□□ 0.46
SMPD4-202ENST00000409031 RWDD3Q9Y3V2 267 aa17.91■□□□□ 0.46
SMPD4-202ENST00000409031 ARHGEF28Q8N1W1 1705 aaKnown RBP17.91■□□□□ 0.46
SMPD4-202ENST00000409031 H0YC42 278 aa17.91■□□□□ 0.46
SMPD4-202ENST00000409031 ZNF143P52747 638 aaPredicted RBP17.91■□□□□ 0.46
SMPD4-202ENST00000409031 TPTEP56180 551 aa17.91■□□□□ 0.46
SMPD4-202ENST00000409031 TYSND1Q2T9J0 566 aa17.91■□□□□ 0.46
SMPD4-202ENST00000409031 ZRANB3Q5FWF4 1079 aa17.91■□□□□ 0.46
SMPD4-202ENST00000409031 ZNF57Q68EA5 555 aaPredicted RBP17.91■□□□□ 0.46
SMPD4-202ENST00000409031 SLC30A10Q6XR72 485 aa17.91■□□□□ 0.46
SMPD4-202ENST00000409031 NIPA1Q7RTP0 329 aa17.91■□□□□ 0.46
SMPD4-202ENST00000409031 PSTKQ8IV42 348 aaKnown RBP17.91■□□□□ 0.46
SMPD4-202ENST00000409031 FBXO30Q8TB52 745 aa17.91■□□□□ 0.46
SMPD4-202ENST00000409031 DNAJB14Q8TBM8 379 aa17.91■□□□□ 0.46
SMPD4-202ENST00000409031 HSPBAP1Q96EW2 488 aa17.91■□□□□ 0.46
SMPD4-202ENST00000409031 KLHL32Q96NJ5 620 aa17.91■□□□□ 0.46
SMPD4-202ENST00000409031 GMPPBQ9Y5P6 360 aa17.91■□□□□ 0.46
SMPD4-202ENST00000409031 SNCAIPQ9Y6H5 919 aa17.91■□□□□ 0.46
SMPD4-202ENST00000409031 F8W810 466 aa17.91■□□□□ 0.46
SMPD4-202ENST00000409031 SMIM22K7EJ46 135 aa17.91■□□□□ 0.46
SMPD4-202ENST00000409031 AARS2Q5JTZ9 985 aaKnown RBP17.91■□□□□ 0.46
SMPD4-202ENST00000409031 SPOUT1Q5T280 376 aaKnown RBP17.91■□□□□ 0.46
SMPD4-202ENST00000409031 DPY19L2Q6NUT2 758 aa17.91■□□□□ 0.46
SMPD4-202ENST00000409031 PDSS2Q86YH6 399 aa17.91■□□□□ 0.46
SMPD4-202ENST00000409031 SMYD1Q8NB12 490 aa17.91■□□□□ 0.46
SMPD4-202ENST00000409031 CDHR5Q9HBB8 845 aa17.91■□□□□ 0.46
SMPD4-202ENST00000409031 TRUB2O95900 331 aaKnown RBP17.9■□□□□ 0.46
SMPD4-202ENST00000409031 SLC2A4P14672 509 aa17.9■□□□□ 0.46
SMPD4-202ENST00000409031 DLG1Q12959 904 aa17.9■□□□□ 0.46
SMPD4-202ENST00000409031 QPRTQ15274 297 aa17.9■□□□□ 0.46
SMPD4-202ENST00000409031 ZBED5Q49AG3 693 aa17.9■□□□□ 0.46
SMPD4-202ENST00000409031 BRINP3Q76B58 766 aa17.9■□□□□ 0.46
SMPD4-202ENST00000409031 THAP5Q7Z6K1 395 aa17.9■□□□□ 0.46
SMPD4-202ENST00000409031 OR56A4Q8NGH8 313 aa17.9■□□□□ 0.46
SMPD4-202ENST00000409031 KREMEN1Q96MU8 473 aa17.9■□□□□ 0.46
SMPD4-202ENST00000409031 MRPL57Q9BQC6 102 aaKnown RBP17.9■□□□□ 0.46
SMPD4-202ENST00000409031 UNC93B1Q9H1C4 597 aa17.9■□□□□ 0.46
SMPD4-202ENST00000409031 C1orf21Q9H246 121 aa17.9■□□□□ 0.46
SMPD4-202ENST00000409031 MICAL2O94851 1124 aa17.9■□□□□ 0.46
SMPD4-202ENST00000409031 PCSK1P29120 753 aa17.9■□□□□ 0.46
SMPD4-202ENST00000409031 TTLL9Q3SXZ7 439 aa17.9■□□□□ 0.46
SMPD4-202ENST00000409031 CBR4Q8N4T8 237 aa17.9■□□□□ 0.46
SMPD4-202ENST00000409031 RNFT2Q96EX2 444 aa17.9■□□□□ 0.46
SMPD4-202ENST00000409031 PCDH12Q9NPG4 1184 aa17.9■□□□□ 0.46
SMPD4-202ENST00000409031 CALCAP01258 141 aa17.9■□□□□ 0.46
SMPD4-202ENST00000409031 SPATA31C1P0DKV0 1188 aa17.9■□□□□ 0.46
SMPD4-202ENST00000409031 CRADDP78560 199 aa17.9■□□□□ 0.46
SMPD4-202ENST00000409031 LSAMPQ13449 338 aa17.9■□□□□ 0.46
SMPD4-202ENST00000409031 GRPEL2Q8TAA5 225 aa17.9■□□□□ 0.46
SMPD4-202ENST00000409031 MYDGFQ969H8 173 aa17.9■□□□□ 0.46
SMPD4-202ENST00000409031 ARHGAP23Q9P227 1491 aa17.9■□□□□ 0.46
SMPD4-202ENST00000409031 HBP1O60381 514 aa17.9■□□□□ 0.46
SMPD4-202ENST00000409031 RECQLP46063 649 aaPredicted RBP17.9■□□□□ 0.46
SMPD4-202ENST00000409031 PPP4R4Q6NUP7 873 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms