RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 DBX2Q6ZNG2 339 aa19.75■□□□□ 0.75
SMARCB1-204ENST00000407422 TBC1D3Q8IZP1 549 aaPredicted RBP19.75■□□□□ 0.75
SMARCB1-204ENST00000407422 PNPLA1Q8N8W4 532 aa19.75■□□□□ 0.75
SMARCB1-204ENST00000407422 DCAF4L2Q8NA75 395 aa19.75■□□□□ 0.75
SMARCB1-204ENST00000407422 OR2A12Q8NGT7 310 aa19.75■□□□□ 0.75
SMARCB1-204ENST00000407422 SPON2Q9BUD6 331 aa19.75■□□□□ 0.75
SMARCB1-204ENST00000407422 SEPT11Q9NVA2 429 aaKnown RBP19.75■□□□□ 0.75
SMARCB1-204ENST00000407422 KLK13Q9UKR3 277 aa19.75■□□□□ 0.75
SMARCB1-204ENST00000407422 BTBD3Q9Y2F9 522 aa19.75■□□□□ 0.75
SMARCB1-204ENST00000407422 ILVBLA1L0T0 632 aa19.74■□□□□ 0.75
SMARCB1-204ENST00000407422 H0Y8X5 98 aa19.74■□□□□ 0.75
SMARCB1-204ENST00000407422 RNF103O00237 685 aa19.74■□□□□ 0.75
SMARCB1-204ENST00000407422 ALOX15BO15296 676 aa19.74■□□□□ 0.75
SMARCB1-204ENST00000407422 TEX33O43247 280 aa19.74■□□□□ 0.75
SMARCB1-204ENST00000407422 KRT3P12035 628 aa19.74■□□□□ 0.75
SMARCB1-204ENST00000407422 ADRA1BP35368 520 aa19.74■□□□□ 0.75
SMARCB1-204ENST00000407422 HDAC4P56524 1084 aa19.74■□□□□ 0.75
SMARCB1-204ENST00000407422 PRAMEF14Q5SWL7 426 aa19.74■□□□□ 0.75
SMARCB1-204ENST00000407422 AGBL4Q5VU57 503 aa19.74■□□□□ 0.75
SMARCB1-204ENST00000407422 FAM46CQ5VWP2 391 aa19.74■□□□□ 0.75
SMARCB1-204ENST00000407422 PHF13Q86YI8 300 aaPredicted RBP19.74■□□□□ 0.75
SMARCB1-204ENST00000407422 DRC7Q8IY82 874 aa19.74■□□□□ 0.75
SMARCB1-204ENST00000407422 CHCHD4Q8N4Q1 142 aa19.74■□□□□ 0.75
SMARCB1-204ENST00000407422 CENPIQ92674 756 aaPredicted RBP19.74■□□□□ 0.75
SMARCB1-204ENST00000407422 AGPAT1Q99943 283 aa19.74■□□□□ 0.75
SMARCB1-204ENST00000407422 TMEM121BQ9BXQ6 578 aaPredicted RBP19.74■□□□□ 0.75
SMARCB1-204ENST00000407422 ACE2Q9BYF1 805 aaPredicted RBP19.74■□□□□ 0.75
SMARCB1-204ENST00000407422 AASDHPPTQ9NRN7 309 aa19.74■□□□□ 0.75
SMARCB1-204ENST00000407422 OR12D3Q9UGF7 316 aa19.74■□□□□ 0.75
SMARCB1-204ENST00000407422 FAM72CH0Y354 149 aa19.73■□□□□ 0.75
SMARCB1-204ENST00000407422 CBX4O00257 560 aa19.73■□□□□ 0.75
SMARCB1-204ENST00000407422 VILLO15195 856 aa19.73■□□□□ 0.75
SMARCB1-204ENST00000407422 KRT37O76014 449 aa19.73■□□□□ 0.75
SMARCB1-204ENST00000407422 PTPN9P43378 593 aa19.73■□□□□ 0.75
SMARCB1-204ENST00000407422 IL9RQ01113 521 aa19.73■□□□□ 0.75
SMARCB1-204ENST00000407422 FAM72AQ5TYM5 149 aa19.73■□□□□ 0.75
SMARCB1-204ENST00000407422 FAM72DQ6L9T8 149 aa19.73■□□□□ 0.75
SMARCB1-204ENST00000407422 UNQ6494/PRO21346Q6UXR6 183 aa19.73■□□□□ 0.75
SMARCB1-204ENST00000407422 MON1BQ7L1V2 547 aa19.73■□□□□ 0.75
SMARCB1-204ENST00000407422 FAM72BQ86X60 149 aa19.73■□□□□ 0.75
SMARCB1-204ENST00000407422 CCDC185Q8N715 623 aa19.73■□□□□ 0.75
SMARCB1-204ENST00000407422 CHST14Q8NCH0 376 aa19.73■□□□□ 0.75
SMARCB1-204ENST00000407422 FAM172AQ8WUF8 416 aa19.73■□□□□ 0.75
SMARCB1-204ENST00000407422 TNKS2Q9H2K2 1166 aa19.73■□□□□ 0.75
SMARCB1-204ENST00000407422 NDFIP2Q9NV92 336 aa19.73■□□□□ 0.75
SMARCB1-204ENST00000407422 PPARGC1AQ9UBK2 798 aaKnown RBP19.73■□□□□ 0.75
SMARCB1-204ENST00000407422 PCDHGB2Q9Y5G2 931 aa19.73■□□□□ 0.75
SMARCB1-204ENST00000407422 C1QTNF3-AMACRE9PGA6 284 aa19.73■□□□□ 0.75
SMARCB1-204ENST00000407422 LATO43561 262 aa19.73■□□□□ 0.75
SMARCB1-204ENST00000407422 PLRG1O43660 514 aaKnown RBP19.73■□□□□ 0.75
SMARCB1-204ENST00000407422 ZMPSTE24O75844 475 aa19.73■□□□□ 0.75
SMARCB1-204ENST00000407422 FTH1P19P0C7X4 201 aa19.73■□□□□ 0.75
SMARCB1-204ENST00000407422 MAT2AP31153 395 aaKnown RBP19.73■□□□□ 0.75
SMARCB1-204ENST00000407422 GSCP56915 257 aaPredicted RBP19.73■□□□□ 0.75
SMARCB1-204ENST00000407422 C21orf59P57076 290 aa19.73■□□□□ 0.75
SMARCB1-204ENST00000407422 ZNF423Q2M1K9 1284 aa19.73■□□□□ 0.75
SMARCB1-204ENST00000407422 MANEALQ5VSG8 457 aa19.73■□□□□ 0.75
SMARCB1-204ENST00000407422 WDR59Q6PJI9 974 aa19.73■□□□□ 0.75
SMARCB1-204ENST00000407422 STRADAQ7RTN6 431 aa19.73■□□□□ 0.75
SMARCB1-204ENST00000407422 BAHD1Q8TBE0 780 aaPredicted RBP19.73■□□□□ 0.75
SMARCB1-204ENST00000407422 SERAC1Q96JX3 654 aa19.73■□□□□ 0.75
SMARCB1-204ENST00000407422 SELENOOQ9BVL4 669 aa19.73■□□□□ 0.75
SMARCB1-204ENST00000407422 NAT10Q9H0A0 1025 aaKnown RBP19.73■□□□□ 0.75
SMARCB1-204ENST00000407422 ARHGAP20Q9P2F6 1191 aa19.73■□□□□ 0.75
SMARCB1-204ENST00000407422 A0A1W2PR77 199 aa19.72■□□□□ 0.75
SMARCB1-204ENST00000407422 FLRT2O43155 660 aa19.72■□□□□ 0.75
SMARCB1-204ENST00000407422 SLC7A4O43246 635 aa19.72■□□□□ 0.75
SMARCB1-204ENST00000407422 ZNF821O75541 412 aaPredicted RBP19.72■□□□□ 0.75
SMARCB1-204ENST00000407422 CALB1P05937 261 aa19.72■□□□□ 0.75
SMARCB1-204ENST00000407422 CD38P28907 300 aa19.72■□□□□ 0.75
SMARCB1-204ENST00000407422 CHRNA3P32297 505 aa19.72■□□□□ 0.75
SMARCB1-204ENST00000407422 TAS2R38P59533 333 aa19.72■□□□□ 0.75
SMARCB1-204ENST00000407422 GNA12Q03113 381 aa19.72■□□□□ 0.75
SMARCB1-204ENST00000407422 ARL13BQ3SXY8 428 aa19.72■□□□□ 0.75
SMARCB1-204ENST00000407422 RWDD4Q6NW29 188 aaKnown RBP19.72■□□□□ 0.75
SMARCB1-204ENST00000407422 C22orf39Q6P5X5 142 aa19.72■□□□□ 0.75
SMARCB1-204ENST00000407422 ZNF783Q6ZMS7 281 aa19.72■□□□□ 0.75
SMARCB1-204ENST00000407422 RAB44Q7Z6P3 723 aaPredicted RBP19.72■□□□□ 0.75
SMARCB1-204ENST00000407422 SLCO6A1Q86UG4 719 aa19.72■□□□□ 0.75
SMARCB1-204ENST00000407422 C3orf20Q8ND61 904 aa19.72■□□□□ 0.75
SMARCB1-204ENST00000407422 RHBDD1Q8TEB9 315 aa19.72■□□□□ 0.75
SMARCB1-204ENST00000407422 OSBPL2Q9H1P3 480 aa19.72■□□□□ 0.75
SMARCB1-204ENST00000407422 KDM4CQ9H3R0 1056 aa19.72■□□□□ 0.75
SMARCB1-204ENST00000407422 ATP13A1Q9HD20 1204 aa19.72■□□□□ 0.75
SMARCB1-204ENST00000407422 NEU3Q9UQ49 428 aa19.72■□□□□ 0.75
SMARCB1-204ENST00000407422 ACTL7AQ9Y615 435 aa19.72■□□□□ 0.75
SMARCB1-204ENST00000407422 TCRBV5S1A1TA0A578 114 aa19.71■□□□□ 0.75
SMARCB1-204ENST00000407422 SIGLEC16A6NMB1 481 aa19.71■□□□□ 0.75
SMARCB1-204ENST00000407422 KPNA3O00505 521 aaPredicted RBP19.71■□□□□ 0.75
SMARCB1-204ENST00000407422 TRIM16O95361 564 aa19.71■□□□□ 0.75
SMARCB1-204ENST00000407422 PROS1P07225 676 aa19.71■□□□□ 0.75
SMARCB1-204ENST00000407422 GPD1P21695 349 aa19.71■□□□□ 0.75
SMARCB1-204ENST00000407422 ACVRL1P37023 503 aa19.71■□□□□ 0.75
SMARCB1-204ENST00000407422 CLCN6P51797 869 aa19.71■□□□□ 0.75
SMARCB1-204ENST00000407422 ARF5P84085 180 aa19.71■□□□□ 0.75
SMARCB1-204ENST00000407422 NRG1Q02297 640 aaPredicted RBP19.71■□□□□ 0.75
SMARCB1-204ENST00000407422 PIP5KL1Q5T9C9 394 aa19.71■□□□□ 0.75
SMARCB1-204ENST00000407422 CAVIN1Q6NZI2 390 aaKnown RBP19.71■□□□□ 0.75
SMARCB1-204ENST00000407422 IRF2BP2Q7Z5L9 587 aa19.71■□□□□ 0.75
SMARCB1-204ENST00000407422 GLRX5Q86SX6 157 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms