RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 NEK8Q86SG6 692 aa5.31□□□□□ -1.56
HMGB1P13-201ENST00000406019 SCN4BQ8IWT1 228 aa5.31□□□□□ -1.56
HMGB1P13-201ENST00000406019 NKAIN3Q8N8D7 197 aa5.31□□□□□ -1.56
HMGB1P13-201ENST00000406019 IGFBPL1Q8WX77 278 aa5.31□□□□□ -1.56
HMGB1P13-201ENST00000406019 PERPQ96FX8 193 aa5.31□□□□□ -1.56
HMGB1P13-201ENST00000406019 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.31□□□□□ -1.56
HMGB1P13-201ENST00000406019 HTATIP2Q9BUP3 242 aa5.31□□□□□ -1.56
HMGB1P13-201ENST00000406019 HDAC6Q9UBN7 1215 aa5.31□□□□□ -1.56
HMGB1P13-201ENST00000406019 ZNF70Q9UC06 446 aaPredicted RBP5.31□□□□□ -1.56
HMGB1P13-201ENST00000406019 KLQ9UEF7 1012 aa5.31□□□□□ -1.56
HMGB1P13-201ENST00000406019 ADD3Q9UEY8 706 aaKnown RBP5.31□□□□□ -1.56
HMGB1P13-201ENST00000406019 CCNL1Q9UK58 526 aaPredicted RBP5.31□□□□□ -1.56
HMGB1P13-201ENST00000406019 LYVE1Q9Y5Y7 322 aa5.31□□□□□ -1.56
HMGB1P13-201ENST00000406019 A0A0U1RQG5 324 aaPredicted RBP5.3□□□□□ -1.56
HMGB1P13-201ENST00000406019 hCG_1807616A0A1W2PRN6 198 aa5.3□□□□□ -1.56
HMGB1P13-201ENST00000406019 A0A1W2PRQ8 180 aa5.3□□□□□ -1.56
HMGB1P13-201ENST00000406019 POC1B-GALNT4F8VUJ3 575 aa5.3□□□□□ -1.56
HMGB1P13-201ENST00000406019 CES2O00748 559 aa5.3□□□□□ -1.56
HMGB1P13-201ENST00000406019 P4HA2O15460 535 aa5.3□□□□□ -1.56
HMGB1P13-201ENST00000406019 EXOC3O60645 756 aa5.3□□□□□ -1.56
HMGB1P13-201ENST00000406019 PGM3O95394 542 aa5.3□□□□□ -1.56
HMGB1P13-201ENST00000406019 TUBB4AP04350 444 aa5.3□□□□□ -1.56
HMGB1P13-201ENST00000406019 ADRB2P07550 413 aa5.3□□□□□ -1.56
HMGB1P13-201ENST00000406019 CHRM5P08912 532 aaPredicted RBP5.3□□□□□ -1.56
HMGB1P13-201ENST00000406019 EPHB2P29323 1055 aa5.3□□□□□ -1.56
HMGB1P13-201ENST00000406019 ABCD1P33897 745 aa5.3□□□□□ -1.56
HMGB1P13-201ENST00000406019 MTNR1AP48039 350 aa5.3□□□□□ -1.56
HMGB1P13-201ENST00000406019 RARSP54136 660 aaKnown RBP5.3□□□□□ -1.56
HMGB1P13-201ENST00000406019 NLRP5P59047 1200 aa5.3□□□□□ -1.56
HMGB1P13-201ENST00000406019 UFM1P61960 85 aa5.3□□□□□ -1.56
HMGB1P13-201ENST00000406019 ARHGAP8P85298 464 aa5.3□□□□□ -1.56
HMGB1P13-201ENST00000406019 ALKBH1Q13686 389 aaKnown RBP5.3□□□□□ -1.56
HMGB1P13-201ENST00000406019 BECN1Q14457 450 aa5.3□□□□□ -1.56
HMGB1P13-201ENST00000406019 NAA25Q14CX7 972 aa5.3□□□□□ -1.56
HMGB1P13-201ENST00000406019 WTAPQ15007 396 aa5.3□□□□□ -1.56
HMGB1P13-201ENST00000406019 SH2D4BQ5SQS7 431 aa5.3□□□□□ -1.56
HMGB1P13-201ENST00000406019 KLHL24Q6TFL4 600 aa5.3□□□□□ -1.56
HMGB1P13-201ENST00000406019 KYAT3Q6YP21 454 aaKnown RBP5.3□□□□□ -1.56
HMGB1P13-201ENST00000406019 ANKRD23Q86SG2 305 aa5.3□□□□□ -1.56
HMGB1P13-201ENST00000406019 CCDC105Q8IYK2 499 aa5.3□□□□□ -1.56
HMGB1P13-201ENST00000406019 TTC39CQ8N584 583 aa5.3□□□□□ -1.56
HMGB1P13-201ENST00000406019 C12orf76Q8N812 135 aaPredicted RBP5.3□□□□□ -1.56
HMGB1P13-201ENST00000406019 PNLDC1Q8NA58 520 aaKnown RBP5.3□□□□□ -1.56
HMGB1P13-201ENST00000406019 FAM120BQ96EK7 910 aaKnown RBP5.3□□□□□ -1.56
HMGB1P13-201ENST00000406019 C5orf34Q96MH7 638 aa5.3□□□□□ -1.56
HMGB1P13-201ENST00000406019 MPHOSPH8Q99549 860 aa5.3□□□□□ -1.56
HMGB1P13-201ENST00000406019 QTRT1Q9BXR0 403 aaKnown RBP5.3□□□□□ -1.56
HMGB1P13-201ENST00000406019 RNF26Q9BY78 433 aaPredicted RBP5.3□□□□□ -1.56
HMGB1P13-201ENST00000406019 SNX15Q9NRS6 342 aa5.3□□□□□ -1.56
HMGB1P13-201ENST00000406019 HCFC1R1Q9NWW0 138 aa5.3□□□□□ -1.56
HMGB1P13-201ENST00000406019 FZD4Q9ULV1 537 aa5.3□□□□□ -1.56
HMGB1P13-201ENST00000406019 SYNDIG1LA6NDD5 238 aa5.29□□□□□ -1.56
HMGB1P13-201ENST00000406019 C17orf100A8MU93 164 aa5.29□□□□□ -1.56
HMGB1P13-201ENST00000406019 STARD3NLO95772 234 aa5.29□□□□□ -1.56
HMGB1P13-201ENST00000406019 DNTTP04053 509 aa5.29□□□□□ -1.56
HMGB1P13-201ENST00000406019 PRR35P0CG20 571 aa5.29□□□□□ -1.56
HMGB1P13-201ENST00000406019 CSH1P0DML2 217 aa5.29□□□□□ -1.56
HMGB1P13-201ENST00000406019 CSH2P0DML3 217 aa5.29□□□□□ -1.56
HMGB1P13-201ENST00000406019 CYP2A6P11509 494 aaPredicted RBP5.29□□□□□ -1.56
HMGB1P13-201ENST00000406019 COX7A2P14406 83 aa5.29□□□□□ -1.56
HMGB1P13-201ENST00000406019 IL11P20809 199 aa5.29□□□□□ -1.56
HMGB1P13-201ENST00000406019 CERS1P27544 350 aa5.29□□□□□ -1.56
HMGB1P13-201ENST00000406019 ACSL1P33121 698 aa5.29□□□□□ -1.56
HMGB1P13-201ENST00000406019 HADHAP40939 763 aa5.29□□□□□ -1.56
HMGB1P13-201ENST00000406019 ABCG1P45844 678 aa5.29□□□□□ -1.56
HMGB1P13-201ENST00000406019 AGTR2P50052 363 aa5.29□□□□□ -1.56
HMGB1P13-201ENST00000406019 RPS6KA3P51812 740 aa5.29□□□□□ -1.56
HMGB1P13-201ENST00000406019 RPL7AP62424 266 aaKnown RBP5.29□□□□□ -1.56
HMGB1P13-201ENST00000406019 B4GALNT1Q00973 533 aa5.29□□□□□ -1.56
HMGB1P13-201ENST00000406019 MC1RQ01726 317 aa5.29□□□□□ -1.56
HMGB1P13-201ENST00000406019 GAB1Q13480 694 aa5.29□□□□□ -1.56
HMGB1P13-201ENST00000406019 LARS2Q15031 903 aaKnown RBP5.29□□□□□ -1.56
HMGB1P13-201ENST00000406019 SUPT20HL1Q3ZLR7 823 aa5.29□□□□□ -1.56
HMGB1P13-201ENST00000406019 SLC9B1Q4ZJI4 515 aa5.29□□□□□ -1.56
HMGB1P13-201ENST00000406019 RILPL1Q5EBL4 403 aa5.29□□□□□ -1.56
HMGB1P13-201ENST00000406019 MFSD4BQ5TF39 518 aa5.29□□□□□ -1.56
HMGB1P13-201ENST00000406019 ARMC3Q5W041 872 aa5.29□□□□□ -1.56
HMGB1P13-201ENST00000406019 DENND2CQ68D51 928 aa5.29□□□□□ -1.56
HMGB1P13-201ENST00000406019 NAPEPLDQ6IQ20 393 aa5.29□□□□□ -1.56
HMGB1P13-201ENST00000406019 MTFR2Q6P444 385 aa5.29□□□□□ -1.56
HMGB1P13-201ENST00000406019 GJB7Q6PEY0 223 aa5.29□□□□□ -1.56
HMGB1P13-201ENST00000406019 TMCO3Q6UWJ1 677 aa5.29□□□□□ -1.56
HMGB1P13-201ENST00000406019 GALNT7Q86SF2 657 aa5.29□□□□□ -1.56
HMGB1P13-201ENST00000406019 ADGRF3Q8IZF5 1079 aa5.29□□□□□ -1.56
HMGB1P13-201ENST00000406019 GALNT16Q8N428 558 aa5.29□□□□□ -1.56
HMGB1P13-201ENST00000406019 EXD3Q8N9H8 876 aa5.29□□□□□ -1.56
HMGB1P13-201ENST00000406019 SRFBP1Q8NEF9 429 aaKnown RBP5.29□□□□□ -1.56
HMGB1P13-201ENST00000406019 RAB40AQ8WXH6 277 aa5.29□□□□□ -1.56
HMGB1P13-201ENST00000406019 KCNJ9Q92806 393 aa5.29□□□□□ -1.56
HMGB1P13-201ENST00000406019 SAAL1Q96ER3 474 aa5.29□□□□□ -1.56
HMGB1P13-201ENST00000406019 ZNF778Q96MU6 729 aa5.29□□□□□ -1.56
HMGB1P13-201ENST00000406019 SH2D3AQ9BRG2 576 aa5.29□□□□□ -1.56
HMGB1P13-201ENST00000406019 HDHD5Q9BXW7 423 aa5.29□□□□□ -1.56
HMGB1P13-201ENST00000406019 EPHX3Q9H6B9 360 aa5.29□□□□□ -1.56
HMGB1P13-201ENST00000406019 PCDHB16Q9NRJ7 776 aa5.29□□□□□ -1.56
HMGB1P13-201ENST00000406019 MPP6Q9NZW5 540 aa5.29□□□□□ -1.56
HMGB1P13-201ENST00000406019 NFKBIL1Q9UBC1 381 aaPredicted RBP5.29□□□□□ -1.56
HMGB1P13-201ENST00000406019 SLCO3A1Q9UIG8 710 aa5.29□□□□□ -1.56
HMGB1P13-201ENST00000406019 VPS4AQ9UN37 437 aa5.29□□□□□ -1.56
HMGB1P13-201ENST00000406019 B3GNT3Q9Y2A9 372 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms