RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 SH2D3AQ9BRG2 576 aa5.48□□□□□ -1.53
HMGB3P19-201ENST00000403971 KRTAP4-9Q9BYQ8 210 aa5.48□□□□□ -1.53
HMGB3P19-201ENST00000403971 IFT80Q9P2H3 777 aaPredicted RBP5.48□□□□□ -1.53
HMGB3P19-201ENST00000403971 KLHL13Q9P2N7 655 aa5.48□□□□□ -1.53
HMGB3P19-201ENST00000403971 SEPT4O43236 478 aa5.47□□□□□ -1.53
HMGB3P19-201ENST00000403971 KLK10O43240 276 aa5.47□□□□□ -1.53
HMGB3P19-201ENST00000403971 TACR3P29371 465 aa5.47□□□□□ -1.53
HMGB3P19-201ENST00000403971 MPGP29372 298 aa5.47□□□□□ -1.53
HMGB3P19-201ENST00000403971 AVPR2P30518 371 aa5.47□□□□□ -1.53
HMGB3P19-201ENST00000403971 PNPLA4P41247 253 aa5.47□□□□□ -1.53
HMGB3P19-201ENST00000403971 UBE3AQ05086 875 aa5.47□□□□□ -1.53
HMGB3P19-201ENST00000403971 ARL13AQ5H913 290 aaPredicted RBP5.47□□□□□ -1.53
HMGB3P19-201ENST00000403971 CEP78Q5JTW2 689 aa5.47□□□□□ -1.53
HMGB3P19-201ENST00000403971 ZNF474Q6S9Z5 364 aaPredicted RBP5.47□□□□□ -1.53
HMGB3P19-201ENST00000403971 RTL10Q7L3V2 364 aa5.47□□□□□ -1.53
HMGB3P19-201ENST00000403971 RNF144BQ7Z419 303 aa5.47□□□□□ -1.53
HMGB3P19-201ENST00000403971 MDGA2Q7Z553 956 aa5.47□□□□□ -1.53
HMGB3P19-201ENST00000403971 VPS52Q8N1B4 723 aa5.47□□□□□ -1.53
HMGB3P19-201ENST00000403971 ADPRHL1Q8NDY3 354 aa5.47□□□□□ -1.53
HMGB3P19-201ENST00000403971 DDB2Q92466 427 aa5.47□□□□□ -1.53
HMGB3P19-201ENST00000403971 PIGKQ92643 395 aa5.47□□□□□ -1.53
HMGB3P19-201ENST00000403971 STAMQ92783 540 aa5.47□□□□□ -1.53
HMGB3P19-201ENST00000403971 NPAS1Q99742 590 aa5.47□□□□□ -1.53
HMGB3P19-201ENST00000403971 REEP2Q9BRK0 252 aa5.47□□□□□ -1.53
HMGB3P19-201ENST00000403971 NOD2Q9HC29 1040 aa5.47□□□□□ -1.53
HMGB3P19-201ENST00000403971 FBXO4Q9UKT5 387 aa5.47□□□□□ -1.53
HMGB3P19-201ENST00000403971 CRYL1Q9Y2S2 319 aa5.47□□□□□ -1.53
HMGB3P19-201ENST00000403971 COX11Q9Y6N1 276 aa5.47□□□□□ -1.53
HMGB3P19-201ENST00000403971 TTC21BQ7Z4L5 1316 aa5.47□□□□□ -1.53
HMGB3P19-201ENST00000403971 ROBO1Q9Y6N7 1651 aa5.47□□□□□ -1.53
HMGB3P19-201ENST00000403971 CRYBG1Q9Y4K1 1723 aa5.46□□□□□ -1.54
HMGB3P19-201ENST00000403971 AHDC1Q5TGY3 1603 aaPredicted RBP5.46□□□□□ -1.54
HMGB3P19-201ENST00000403971 PHRF1Q9P1Y6 1649 aaKnown RBP5.46□□□□□ -1.54
HMGB3P19-201ENST00000403971 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.46□□□□□ -1.54
HMGB3P19-201ENST00000403971 SLC22A23A1A5C7 686 aa5.46□□□□□ -1.54
HMGB3P19-201ENST00000403971 VWA3AA6NCI4 1184 aa5.46□□□□□ -1.54
HMGB3P19-201ENST00000403971 DSCR3O14972 297 aa5.46□□□□□ -1.54
HMGB3P19-201ENST00000403971 INPPL1O15357 1258 aa5.46□□□□□ -1.54
HMGB3P19-201ENST00000403971 RNF8O76064 485 aa5.46□□□□□ -1.54
HMGB3P19-201ENST00000403971 PLAUP00749 431 aa5.46□□□□□ -1.54
HMGB3P19-201ENST00000403971 PRKCGP05129 697 aa5.46□□□□□ -1.54
HMGB3P19-201ENST00000403971 TGM2P21980 687 aa5.46□□□□□ -1.54
HMGB3P19-201ENST00000403971 HOXA7P31268 230 aaPredicted RBP5.46□□□□□ -1.54
HMGB3P19-201ENST00000403971 NHLH1Q02575 133 aa5.46□□□□□ -1.54
HMGB3P19-201ENST00000403971 ZNF268Q14587 947 aaPredicted RBP5.46□□□□□ -1.54
HMGB3P19-201ENST00000403971 ANKRD1Q15327 319 aa5.46□□□□□ -1.54
HMGB3P19-201ENST00000403971 GLE1Q53GS7 698 aaKnown RBP5.46□□□□□ -1.54
HMGB3P19-201ENST00000403971 MAP3K21Q5TCX8 1036 aa5.46□□□□□ -1.54
HMGB3P19-201ENST00000403971 MTFR2Q6P444 385 aa5.46□□□□□ -1.54
HMGB3P19-201ENST00000403971 ZNF813Q6ZN06 617 aa5.46□□□□□ -1.54
HMGB3P19-201ENST00000403971 RBM44Q6ZP01 1051 aaKnown RBP5.46□□□□□ -1.54
HMGB3P19-201ENST00000403971 MMS22LQ6ZRQ5 1243 aa5.46□□□□□ -1.54
HMGB3P19-201ENST00000403971 TMEM200AQ86VY9 491 aa5.46□□□□□ -1.54
HMGB3P19-201ENST00000403971 PRIMA1Q86XR5 153 aa5.46□□□□□ -1.54
HMGB3P19-201ENST00000403971 P2RY11Q96G91 374 aa5.46□□□□□ -1.54
HMGB3P19-201ENST00000403971 ACAD9Q9H845 621 aa5.46□□□□□ -1.54
HMGB3P19-201ENST00000403971 ADARB2Q9NS39 739 aaKnown RBP5.46□□□□□ -1.54
HMGB3P19-201ENST00000403971 SLC22A11Q9NSA0 550 aa5.46□□□□□ -1.54
HMGB3P19-201ENST00000403971 THAP1Q9NVV9 213 aa5.46□□□□□ -1.54
HMGB3P19-201ENST00000403971 TMEM160Q9NX00 188 aa5.46□□□□□ -1.54
HMGB3P19-201ENST00000403971 PDP2Q9P2J9 529 aa5.46□□□□□ -1.54
HMGB3P19-201ENST00000403971 GJD2Q9UKL4 321 aa5.46□□□□□ -1.54
HMGB3P19-201ENST00000403971 MAFFQ9ULX9 164 aa5.46□□□□□ -1.54
HMGB3P19-201ENST00000403971 LTN1O94822 1766 aa5.46□□□□□ -1.54
HMGB3P19-201ENST00000403971 OVOS2A0A0J9YW53 1432 aa5.46□□□□□ -1.54
HMGB3P19-201ENST00000403971 OVOS2Q6IE36 1432 aa5.46□□□□□ -1.54
HMGB3P19-201ENST00000403971 SPATA31A5Q5VU36 1347 aa5.46□□□□□ -1.54
HMGB3P19-201ENST00000403971 NPHP3Q7Z494 1330 aa5.46□□□□□ -1.54
HMGB3P19-201ENST00000403971 EMSYQ7Z589 1322 aa5.46□□□□□ -1.54
HMGB3P19-201ENST00000403971 SPATA31A7Q8IWB4 1347 aa5.46□□□□□ -1.54
HMGB3P19-201ENST00000403971 SBNO1A3KN83 1393 aa5.45□□□□□ -1.54
HMGB3P19-201ENST00000403971 RBMXL2O75526 392 aaKnown RBP5.45□□□□□ -1.54
HMGB3P19-201ENST00000403971 LATS1O95835 1130 aa5.45□□□□□ -1.54
HMGB3P19-201ENST00000403971 AKR1A1P14550 325 aa5.45□□□□□ -1.54
HMGB3P19-201ENST00000403971 TUBP50607 506 aa5.45□□□□□ -1.54
HMGB3P19-201ENST00000403971 CHRNDQ07001 517 aa5.45□□□□□ -1.54
HMGB3P19-201ENST00000403971 ALKBH1Q13686 389 aaKnown RBP5.45□□□□□ -1.54
HMGB3P19-201ENST00000403971 THOC5Q13769 683 aaKnown RBP5.45□□□□□ -1.54
HMGB3P19-201ENST00000403971 CBWD5Q5RIA9 395 aa5.45□□□□□ -1.54
HMGB3P19-201ENST00000403971 BBS12Q6ZW61 710 aa5.45□□□□□ -1.54
HMGB3P19-201ENST00000403971 HEATR4Q86WZ0 1026 aa5.45□□□□□ -1.54
HMGB3P19-201ENST00000403971 SCN4BQ8IWT1 228 aa5.45□□□□□ -1.54
HMGB3P19-201ENST00000403971 ESX1Q8N693 406 aa5.45□□□□□ -1.54
HMGB3P19-201ENST00000403971 ANKRD44Q8N8A2 993 aa5.45□□□□□ -1.54
HMGB3P19-201ENST00000403971 ENDOVQ8N8Q3 282 aaKnown RBP5.45□□□□□ -1.54
HMGB3P19-201ENST00000403971 FAM110DQ8TAY7 271 aaPredicted RBP5.45□□□□□ -1.54
HMGB3P19-201ENST00000403971 IP6K1Q92551 441 aa5.45□□□□□ -1.54
HMGB3P19-201ENST00000403971 ADAD1Q96M93 576 aaKnown RBP5.45□□□□□ -1.54
HMGB3P19-201ENST00000403971 TRIM31Q9BZY9 425 aa5.45□□□□□ -1.54
HMGB3P19-201ENST00000403971 PI4KBQ9UBF8 816 aa5.45□□□□□ -1.54
HMGB3P19-201ENST00000403971 KLQ9UEF7 1012 aa5.45□□□□□ -1.54
HMGB3P19-201ENST00000403971 SLC25A13Q9UJS0 675 aa5.45□□□□□ -1.54
HMGB3P19-201ENST00000403971 PKP3Q9Y446 797 aa5.45□□□□□ -1.54
HMGB3P19-201ENST00000403971 WDR17Q8IZU2 1322 aa5.45□□□□□ -1.54
HMGB3P19-201ENST00000403971 PXDNQ92626 1479 aa5.45□□□□□ -1.54
HMGB3P19-201ENST00000403971 PEX12O00623 359 aa5.44□□□□□ -1.54
HMGB3P19-201ENST00000403971 SYN3O14994 580 aa5.44□□□□□ -1.54
HMGB3P19-201ENST00000403971 TOM1O60784 492 aa5.44□□□□□ -1.54
HMGB3P19-201ENST00000403971 ARSAP15289 507 aa5.44□□□□□ -1.54
HMGB3P19-201ENST00000403971 ADPRHP54922 357 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms