RNA–Protein interactions for RNA: ENST00000400018.7

SKA3-203, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SKA3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-203ENST00000400018 CYB5D2Q8WUJ1 264 aa11.94□□□□□ -0.5
SKA3-203ENST00000400018 TNKS2Q9H2K2 1166 aa11.94□□□□□ -0.5
SKA3-203ENST00000400018 NSUN3Q9H649 340 aaKnown RBP11.94□□□□□ -0.5
SKA3-203ENST00000400018 TASP1Q9H6P5 420 aa11.94□□□□□ -0.5
SKA3-203ENST00000400018 CATSPERBQ9H7T0 1116 aa11.94□□□□□ -0.5
SKA3-203ENST00000400018 MED4Q9NPJ6 270 aa11.94□□□□□ -0.5
SKA3-203ENST00000400018 ABCB8Q9NUT2 735 aa11.94□□□□□ -0.5
SKA3-203ENST00000400018 CTNNAL1Q9UBT7 734 aa11.94□□□□□ -0.5
SKA3-203ENST00000400018 INTS6Q9UL03 887 aaKnown RBP11.94□□□□□ -0.5
SKA3-203ENST00000400018 TPX2Q9ULW0 747 aaKnown RBP11.94□□□□□ -0.5
SKA3-203ENST00000400018 DRG1Q9Y295 367 aaKnown RBP11.94□□□□□ -0.5
SKA3-203ENST00000400018 ASB3Q9Y575 518 aa11.94□□□□□ -0.5
SKA3-203ENST00000400018 BHMG1C9JSJ3 638 aaPredicted RBP11.93□□□□□ -0.5
SKA3-203ENST00000400018 RHOCP08134 193 aa11.93□□□□□ -0.5
SKA3-203ENST00000400018 HSD17B3P37058 310 aa11.93□□□□□ -0.5
SKA3-203ENST00000400018 SLC6A11P48066 632 aa11.93□□□□□ -0.5
SKA3-203ENST00000400018 MLLT1Q03111 559 aaPredicted RBP11.93□□□□□ -0.5
SKA3-203ENST00000400018 PDIA2Q13087 525 aaKnown RBP11.93□□□□□ -0.5
SKA3-203ENST00000400018 PTPRCAPQ14761 206 aa11.93□□□□□ -0.5
SKA3-203ENST00000400018 KCTD16Q68DU8 428 aa11.93□□□□□ -0.5
SKA3-203ENST00000400018 GRK7Q8WTQ7 553 aa11.93□□□□□ -0.5
SKA3-203ENST00000400018 NAT14Q8WUY8 206 aa11.93□□□□□ -0.5
SKA3-203ENST00000400018 PRCCQ92733 491 aaPredicted RBP11.93□□□□□ -0.5
SKA3-203ENST00000400018 C1orf74Q96LT6 269 aa11.93□□□□□ -0.5
SKA3-203ENST00000400018 MLPHQ9BV36 600 aaPredicted RBP11.93□□□□□ -0.5
SKA3-203ENST00000400018 EPB41L4BQ9H329 900 aa11.93□□□□□ -0.5
SKA3-203ENST00000400018 SP110Q9HB58 689 aa11.93□□□□□ -0.5
SKA3-203ENST00000400018 PCDH9Q9HC56 1237 aa11.93□□□□□ -0.5
SKA3-203ENST00000400018 ATP13A1Q9HD20 1204 aa11.93□□□□□ -0.5
SKA3-203ENST00000400018 IGLV3-10A0A075B6K4 115 aa11.93□□□□□ -0.5
SKA3-203ENST00000400018 BCLAF3A2AJT9 711 aaKnown RBP11.93□□□□□ -0.5
SKA3-203ENST00000400018 KIF1CO43896 1103 aaKnown RBP11.93□□□□□ -0.5
SKA3-203ENST00000400018 PEX11BO96011 259 aa11.93□□□□□ -0.5
SKA3-203ENST00000400018 RHOQP17081 205 aa11.93□□□□□ -0.5
SKA3-203ENST00000400018 FSHRP23945 695 aa11.93□□□□□ -0.5
SKA3-203ENST00000400018 HLA-FP30511 346 aa11.93□□□□□ -0.5
SKA3-203ENST00000400018 TFF2Q03403 129 aa11.93□□□□□ -0.5
SKA3-203ENST00000400018 PPIDQ08752 370 aaKnown RBP11.93□□□□□ -0.5
SKA3-203ENST00000400018 CDH18Q13634 790 aa11.93□□□□□ -0.5
SKA3-203ENST00000400018 SLC29A2Q14542 456 aa11.93□□□□□ -0.5
SKA3-203ENST00000400018 PDK1Q15118 436 aa11.93□□□□□ -0.5
SKA3-203ENST00000400018 HIBCHQ6NVY1 386 aaPredicted RBP11.93□□□□□ -0.5
SKA3-203ENST00000400018 RHBDF2Q6PJF5 856 aa11.93□□□□□ -0.5
SKA3-203ENST00000400018 TMC3Q7Z5M5 1100 aa11.93□□□□□ -0.5
SKA3-203ENST00000400018 PSTKQ8IV42 348 aaKnown RBP11.93□□□□□ -0.5
SKA3-203ENST00000400018 IPMKQ8NFU5 416 aa11.93□□□□□ -0.5
SKA3-203ENST00000400018 OR52K1Q8NGK4 314 aa11.93□□□□□ -0.5
SKA3-203ENST00000400018 OVCA2Q8WZ82 227 aa11.93□□□□□ -0.5
SKA3-203ENST00000400018 SEC14L1Q92503 715 aa11.93□□□□□ -0.5
SKA3-203ENST00000400018 ARHGEF2Q92974 986 aaKnown RBP11.93□□□□□ -0.5
SKA3-203ENST00000400018 ZNF778Q96MU6 729 aa11.93□□□□□ -0.5
SKA3-203ENST00000400018 BBS2Q9BXC9 721 aa11.93□□□□□ -0.5
SKA3-203ENST00000400018 CDC42EP4Q9H3Q1 356 aaKnown RBP11.93□□□□□ -0.5
SKA3-203ENST00000400018 POLR3BQ9NW08 1133 aaPredicted RBP11.93□□□□□ -0.5
SKA3-203ENST00000400018 ARGLU1Q9NWB6 273 aaPredicted RBP11.93□□□□□ -0.5
SKA3-203ENST00000400018 TMEM248Q9NWD8 314 aa11.93□□□□□ -0.5
SKA3-203ENST00000400018 TLDC2A0PJX2 215 aa11.92□□□□□ -0.5
SKA3-203ENST00000400018 ARHGAP42A6NI28 874 aa11.92□□□□□ -0.5
SKA3-203ENST00000400018 DRGXA6NNA5 263 aa11.92□□□□□ -0.5
SKA3-203ENST00000400018 E7EVH7 732 aa11.92□□□□□ -0.5
SKA3-203ENST00000400018 HOXC13P31276 330 aa11.92□□□□□ -0.5
SKA3-203ENST00000400018 GNA12Q03113 381 aa11.92□□□□□ -0.5
SKA3-203ENST00000400018 NIPAL4Q0D2K0 466 aa11.92□□□□□ -0.5
SKA3-203ENST00000400018 CDKL3Q8IVW4 592 aaPredicted RBP11.92□□□□□ -0.5
SKA3-203ENST00000400018 NAT8LQ8N9F0 302 aa11.92□□□□□ -0.5
SKA3-203ENST00000400018 PDCD6IPQ8WUM4 868 aaKnown RBP11.92□□□□□ -0.5
SKA3-203ENST00000400018 PLD4Q96BZ4 506 aa11.92□□□□□ -0.5
SKA3-203ENST00000400018 ZIM3Q96PE6 472 aa11.92□□□□□ -0.5
SKA3-203ENST00000400018 VPS28Q9UK41 221 aa11.92□□□□□ -0.5
SKA3-203ENST00000400018 FNDC3AQ9Y2H6 1198 aaKnown RBP11.92□□□□□ -0.5
SKA3-203ENST00000400018 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.92□□□□□ -0.5
SKA3-203ENST00000400018 WASH3PC4AMC7 463 aa11.92□□□□□ -0.5
SKA3-203ENST00000400018 H3BQF6 201 aa11.92□□□□□ -0.5
SKA3-203ENST00000400018 CD160O95971 181 aa11.92□□□□□ -0.5
SKA3-203ENST00000400018 BMP8BP34820 402 aa11.92□□□□□ -0.5
SKA3-203ENST00000400018 ABCG1P45844 678 aa11.92□□□□□ -0.5
SKA3-203ENST00000400018 SLC7A9P82251 487 aa11.92□□□□□ -0.5
SKA3-203ENST00000400018 ARF5P84085 180 aa11.92□□□□□ -0.5
SKA3-203ENST00000400018 LMAN2Q12907 356 aa11.92□□□□□ -0.5
SKA3-203ENST00000400018 ZNF177Q13360 481 aaPredicted RBP11.92□□□□□ -0.5
SKA3-203ENST00000400018 SWT1Q5T5J6 900 aaKnown RBP11.92□□□□□ -0.5
SKA3-203ENST00000400018 TMEM215Q68D42 235 aa11.92□□□□□ -0.5
SKA3-203ENST00000400018 ANKRD54Q6NXT1 300 aa11.92□□□□□ -0.5
SKA3-203ENST00000400018 DRICH1Q6PGQ1 229 aaPredicted RBP11.92□□□□□ -0.5
SKA3-203ENST00000400018 KLHDC10Q6PID8 442 aa11.92□□□□□ -0.5
SKA3-203ENST00000400018 ZNF534Q76KX8 674 aa11.92□□□□□ -0.5
SKA3-203ENST00000400018 SUGP1Q8IWZ8 645 aaKnown RBP11.92□□□□□ -0.5
SKA3-203ENST00000400018 ADGRG2Q8IZP9 1017 aa11.92□□□□□ -0.5
SKA3-203ENST00000400018 CFAP36Q96G28 342 aa11.92□□□□□ -0.5
SKA3-203ENST00000400018 SLCO3A1Q9UIG8 710 aa11.92□□□□□ -0.5
SKA3-203ENST00000400018 FARP1Q9Y4F1 1045 aaPredicted RBP11.92□□□□□ -0.5
SKA3-203ENST00000400018 A0A0A0MRY4 1105 aa11.91□□□□□ -0.5
SKA3-203ENST00000400018 HEPACAM2A8MVW5 462 aa11.91□□□□□ -0.5
SKA3-203ENST00000400018 PPP1R12AO14974 1030 aaPredicted RBP11.91□□□□□ -0.5
SKA3-203ENST00000400018 INSIG1O15503 277 aa11.91□□□□□ -0.5
SKA3-203ENST00000400018 ATP9BO43861 1147 aa11.91□□□□□ -0.5
SKA3-203ENST00000400018 ASGR2P07307 311 aa11.91□□□□□ -0.5
SKA3-203ENST00000400018 TYRP14679 529 aa11.91□□□□□ -0.5
SKA3-203ENST00000400018 ZFXP17010 805 aaPredicted RBP11.91□□□□□ -0.5
SKA3-203ENST00000400018 CD86P42081 329 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms