RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 AHSA1O95433 338 aa8.7□□□□□ -1.02
CACNA1C-220ENST00000399655 LATS1O95835 1130 aa8.7□□□□□ -1.02
CACNA1C-220ENST00000399655 ACAT1P24752 427 aaKnown RBP8.7□□□□□ -1.02
CACNA1C-220ENST00000399655 GSTT1P30711 240 aa8.7□□□□□ -1.02
CACNA1C-220ENST00000399655 NFIXQ14938 502 aa8.7□□□□□ -1.02
CACNA1C-220ENST00000399655 KLHL26Q53HC5 615 aa8.7□□□□□ -1.02
CACNA1C-220ENST00000399655 NAPRTQ6XQN6 538 aa8.7□□□□□ -1.02
CACNA1C-220ENST00000399655 GAS2L3Q86XJ1 694 aa8.7□□□□□ -1.02
CACNA1C-220ENST00000399655 OR14A2Q96R54 314 aa8.7□□□□□ -1.02
CACNA1C-220ENST00000399655 PABPC3Q9H361 631 aaKnown RBP8.7□□□□□ -1.02
CACNA1C-220ENST00000399655 ALG6Q9Y672 507 aa8.7□□□□□ -1.02
CACNA1C-220ENST00000399655 DGKIO75912 1065 aa8.7□□□□□ -1.02
CACNA1C-220ENST00000399655 KCNA5P22460 613 aa8.7□□□□□ -1.02
CACNA1C-220ENST00000399655 CHKAP35790 457 aa8.7□□□□□ -1.02
CACNA1C-220ENST00000399655 FDFT1P37268 417 aa8.7□□□□□ -1.02
CACNA1C-220ENST00000399655 C11orf65Q8NCR3 313 aa8.7□□□□□ -1.02
CACNA1C-220ENST00000399655 OR6Y1Q8NGX8 325 aa8.7□□□□□ -1.02
CACNA1C-220ENST00000399655 CPT1CQ8TCG5 803 aa8.7□□□□□ -1.02
CACNA1C-220ENST00000399655 SCGB1C1Q8TD33 95 aa8.7□□□□□ -1.02
CACNA1C-220ENST00000399655 PIGKQ92643 395 aa8.7□□□□□ -1.02
CACNA1C-220ENST00000399655 PBDC1Q9BVG4 233 aa8.7□□□□□ -1.02
CACNA1C-220ENST00000399655 ZNF717Q9BY31 904 aaPredicted RBP8.7□□□□□ -1.02
CACNA1C-220ENST00000399655 AP1M2Q9Y6Q5 423 aa8.7□□□□□ -1.02
CACNA1C-220ENST00000399655 PTPN3P26045 913 aa8.7□□□□□ -1.02
CACNA1C-220ENST00000399655 ETFBP38117 255 aa8.7□□□□□ -1.02
CACNA1C-220ENST00000399655 CORO7P57737 925 aa8.7□□□□□ -1.02
CACNA1C-220ENST00000399655 MPP3Q13368 585 aa8.7□□□□□ -1.02
CACNA1C-220ENST00000399655 DDX39BQ13838 428 aaKnown RBP8.7□□□□□ -1.02
CACNA1C-220ENST00000399655 HDAC7Q8WUI4 952 aa8.7□□□□□ -1.02
CACNA1C-220ENST00000399655 ZSCAN5CA6NGD5 496 aaPredicted RBP8.7□□□□□ -1.02
CACNA1C-220ENST00000399655 MID1O15344 667 aa8.7□□□□□ -1.02
CACNA1C-220ENST00000399655 SGTAO43765 313 aa8.7□□□□□ -1.02
CACNA1C-220ENST00000399655 TSPAN5P62079 268 aa8.7□□□□□ -1.02
CACNA1C-220ENST00000399655 PIK3R6Q5UE93 754 aa8.7□□□□□ -1.02
CACNA1C-220ENST00000399655 ZSCAN5AQ9BUG6 496 aa8.7□□□□□ -1.02
CACNA1C-220ENST00000399655 DENND2DQ9H6A0 471 aaPredicted RBP8.7□□□□□ -1.02
CACNA1C-220ENST00000399655 FLT1P17948 1338 aa8.7□□□□□ -1.02
CACNA1C-220ENST00000399655 CYP2A7P20853 494 aa8.7□□□□□ -1.02
CACNA1C-220ENST00000399655 RAB5CP51148 216 aa8.7□□□□□ -1.02
CACNA1C-220ENST00000399655 SFRP1Q8N474 314 aa8.7□□□□□ -1.02
CACNA1C-220ENST00000399655 MFSD8Q8NHS3 518 aa8.7□□□□□ -1.02
CACNA1C-220ENST00000399655 SMG7Q92540 1137 aaKnown RBP8.7□□□□□ -1.02
CACNA1C-220ENST00000399655 ALPK1Q96QP1 1244 aa8.7□□□□□ -1.02
CACNA1C-220ENST00000399655 TM6SF1Q9BZW5 370 aa8.7□□□□□ -1.02
CACNA1C-220ENST00000399655 SAGE1Q9NXZ1 904 aa8.7□□□□□ -1.02
CACNA1C-220ENST00000399655 N6AMT1Q9Y5N5 214 aa8.7□□□□□ -1.02
CACNA1C-220ENST00000399655 WDR19Q8NEZ3 1342 aa8.7□□□□□ -1.02
CACNA1C-220ENST00000399655 SCO1O75880 301 aa8.69□□□□□ -1.02
CACNA1C-220ENST00000399655 LRRC14Q15048 493 aa8.69□□□□□ -1.02
CACNA1C-220ENST00000399655 CDK5RAP1Q96SZ6 601 aaKnown RBP8.69□□□□□ -1.02
CACNA1C-220ENST00000399655 ZSWIM6Q9HCJ5 1215 aa8.69□□□□□ -1.02
CACNA1C-220ENST00000399655 RABL2AQ9UBK7 228 aaPredicted RBP8.69□□□□□ -1.02
CACNA1C-220ENST00000399655 WASF2Q9Y6W5 498 aa8.69□□□□□ -1.02
CACNA1C-220ENST00000399655 ZMPSTE24O75844 475 aa8.69□□□□□ -1.02
CACNA1C-220ENST00000399655 DLGAP5Q15398 846 aa8.69□□□□□ -1.02
CACNA1C-220ENST00000399655 ZYXQ15942 572 aaKnown RBP8.69□□□□□ -1.02
CACNA1C-220ENST00000399655 SLC51BQ86UW2 128 aa8.69□□□□□ -1.02
CACNA1C-220ENST00000399655 PNPLA3Q9NST1 481 aa8.69□□□□□ -1.02
CACNA1C-220ENST00000399655 POLR3EQ9NVU0 708 aa8.69□□□□□ -1.02
CACNA1C-220ENST00000399655 TAS2R7Q9NYW3 318 aa8.69□□□□□ -1.02
CACNA1C-220ENST00000399655 GRIN2DO15399 1336 aa8.69□□□□□ -1.02
CACNA1C-220ENST00000399655 XKRYO14609 159 aa8.69□□□□□ -1.02
CACNA1C-220ENST00000399655 LHCGRP22888 699 aa8.69□□□□□ -1.02
CACNA1C-220ENST00000399655 POLR2HP52434 150 aaKnown RBP8.69□□□□□ -1.02
CACNA1C-220ENST00000399655 SEC24CP53992 1094 aa8.69□□□□□ -1.02
CACNA1C-220ENST00000399655 Q3C1V9 767 aa8.69□□□□□ -1.02
CACNA1C-220ENST00000399655 PTF1AQ7RTS3 328 aa8.69□□□□□ -1.02
CACNA1C-220ENST00000399655 ZNF649Q9BS31 505 aa8.69□□□□□ -1.02
CACNA1C-220ENST00000399655 CDCA7Q9BWT1 371 aaPredicted RBP8.69□□□□□ -1.02
CACNA1C-220ENST00000399655 GTPBP2Q9BX10 602 aaKnown RBP8.69□□□□□ -1.02
CACNA1C-220ENST00000399655 LIN7CQ9NUP9 197 aaKnown RBP8.69□□□□□ -1.02
CACNA1C-220ENST00000399655 AAR2Q9Y312 384 aaKnown RBP8.69□□□□□ -1.02
CACNA1C-220ENST00000399655 CASKO14936 926 aa8.69□□□□□ -1.02
CACNA1C-220ENST00000399655 CHRM3P20309 590 aa8.69□□□□□ -1.02
CACNA1C-220ENST00000399655 ELOAQ14241 798 aaKnown RBP8.69□□□□□ -1.02
CACNA1C-220ENST00000399655 PLEKHG4Q58EX7 1191 aa8.69□□□□□ -1.02
CACNA1C-220ENST00000399655 ZNF720Q7Z2F6 126 aa8.69□□□□□ -1.02
CACNA1C-220ENST00000399655 TMC8Q8IU68 726 aa8.69□□□□□ -1.02
CACNA1C-220ENST00000399655 GDPD5Q8WTR4 605 aa8.69□□□□□ -1.02
CACNA1C-220ENST00000399655 DCPSQ96C86 337 aaKnown RBP8.69□□□□□ -1.02
CACNA1C-220ENST00000399655 GMCL1Q96IK5 515 aa8.69□□□□□ -1.02
CACNA1C-220ENST00000399655 LEF1Q9UJU2 399 aaPredicted RBP8.69□□□□□ -1.02
CACNA1C-220ENST00000399655 AK5Q9Y6K8 562 aa8.69□□□□□ -1.02
CACNA1C-220ENST00000399655 PCDH11XQ9BZA7 1347 aa8.69□□□□□ -1.02
CACNA1C-220ENST00000399655 C17orf113A0A1B0GUU1 675 aa8.69□□□□□ -1.02
CACNA1C-220ENST00000399655 TPBGLP0DKB5 382 aa8.69□□□□□ -1.02
CACNA1C-220ENST00000399655 DGCR6Q14129 220 aa8.69□□□□□ -1.02
CACNA1C-220ENST00000399655 DCAF6Q58WW2 860 aa8.69□□□□□ -1.02
CACNA1C-220ENST00000399655 TREML1Q86YW5 311 aa8.69□□□□□ -1.02
CACNA1C-220ENST00000399655 OR10H5Q8NGA6 315 aa8.69□□□□□ -1.02
CACNA1C-220ENST00000399655 C1orf216Q8TAB5 229 aa8.69□□□□□ -1.02
CACNA1C-220ENST00000399655 CEP76Q8TAP6 659 aa8.69□□□□□ -1.02
CACNA1C-220ENST00000399655 CCDC106Q9BWC9 280 aa8.69□□□□□ -1.02
CACNA1C-220ENST00000399655 UBQLN2Q9UHD9 624 aa8.69□□□□□ -1.02
CACNA1C-220ENST00000399655 PCDHA2Q9Y5H9 948 aa8.69□□□□□ -1.02
CACNA1C-220ENST00000399655 RNF123Q5XPI4 1314 aa8.69□□□□□ -1.02
CACNA1C-220ENST00000399655 KIAA0391O15091 583 aaKnown RBP8.69□□□□□ -1.02
CACNA1C-220ENST00000399655 IL1AP01583 271 aa8.69□□□□□ -1.02
CACNA1C-220ENST00000399655 CD40LGP29965 261 aa8.69□□□□□ -1.02
CACNA1C-220ENST00000399655 SULF1Q8IWU6 871 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms