RNA–Protein interactions for RNA: ENST00000398452.6

SKA1-202, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA1, Length 979 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-202ENST00000398452 PRPSAP1Q14558 356 aa14.51□□□□□ -0.09
SKA1-202ENST00000398452 TMCO4Q5TGY1 634 aa14.51□□□□□ -0.09
SKA1-202ENST00000398452 FYB2Q5VWT5 728 aa14.51□□□□□ -0.09
SKA1-202ENST00000398452 AFMIDQ63HM1 303 aa14.51□□□□□ -0.09
SKA1-202ENST00000398452 RETSATQ6NUM9 610 aa14.51□□□□□ -0.09
SKA1-202ENST00000398452 PARM1Q6UWI2 310 aa14.51□□□□□ -0.09
SKA1-202ENST00000398452 PID1Q7Z2X4 250 aa14.51□□□□□ -0.09
SKA1-202ENST00000398452 NETO2Q8NC67 525 aa14.51□□□□□ -0.09
SKA1-202ENST00000398452 RIN3Q8TB24 985 aa14.51□□□□□ -0.09
SKA1-202ENST00000398452 NXPE3Q969Y0 559 aa14.51□□□□□ -0.09
SKA1-202ENST00000398452 RSPRY1Q96DX4 576 aa14.51□□□□□ -0.09
SKA1-202ENST00000398452 PPP1R2P1Q96PQ5 205 aa14.51□□□□□ -0.09
SKA1-202ENST00000398452 TRIM51Q9BSJ1 452 aa14.51□□□□□ -0.09
SKA1-202ENST00000398452 KLC2Q9H0B6 622 aa14.51□□□□□ -0.09
SKA1-202ENST00000398452 DPH5Q9H2P9 285 aa14.51□□□□□ -0.09
SKA1-202ENST00000398452 EBF3Q9H4W6 596 aa14.51□□□□□ -0.09
SKA1-202ENST00000398452 BRD9Q9H8M2 597 aa14.51□□□□□ -0.09
SKA1-202ENST00000398452 EPB41L5Q9HCM4 733 aa14.51□□□□□ -0.09
SKA1-202ENST00000398452 TRHDEQ9UKU6 1024 aa14.51□□□□□ -0.09
SKA1-202ENST00000398452 TTLL3Q9Y4R7 772 aa14.51□□□□□ -0.09
SKA1-202ENST00000398452 UQCRHLA0A096LP55 91 aa14.5□□□□□ -0.09
SKA1-202ENST00000398452 A0A0A0MRY4 1105 aa14.5□□□□□ -0.09
SKA1-202ENST00000398452 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.5□□□□□ -0.09
SKA1-202ENST00000398452 RNF103O00237 685 aa14.5□□□□□ -0.09
SKA1-202ENST00000398452 GFRA2O00451 464 aa14.5□□□□□ -0.09
SKA1-202ENST00000398452 KDELR3O43731 214 aa14.5□□□□□ -0.09
SKA1-202ENST00000398452 OPHN1O60890 802 aa14.5□□□□□ -0.09
SKA1-202ENST00000398452 CYP17A1P05093 508 aa14.5□□□□□ -0.09
SKA1-202ENST00000398452 UQCRHP07919 91 aa14.5□□□□□ -0.09
SKA1-202ENST00000398452 CCNB1P14635 433 aa14.5□□□□□ -0.09
SKA1-202ENST00000398452 FCARP24071 287 aa14.5□□□□□ -0.09
SKA1-202ENST00000398452 CSKP41240 450 aa14.5□□□□□ -0.09
SKA1-202ENST00000398452 TNNT3P45378 269 aaPredicted RBP14.5□□□□□ -0.09
SKA1-202ENST00000398452 TERF1P54274 439 aa14.5□□□□□ -0.09
SKA1-202ENST00000398452 BASP1P80723 227 aaKnown RBP14.5□□□□□ -0.09
SKA1-202ENST00000398452 SULT2A1Q06520 285 aa14.5□□□□□ -0.09
SKA1-202ENST00000398452 SERINC3Q13530 473 aa14.5□□□□□ -0.09
SKA1-202ENST00000398452 CUL1Q13616 776 aa14.5□□□□□ -0.09
SKA1-202ENST00000398452 RUNX3Q13761 415 aa14.5□□□□□ -0.09
SKA1-202ENST00000398452 DMC1Q14565 340 aa14.5□□□□□ -0.09
SKA1-202ENST00000398452 ZNF235Q14590 738 aa14.5□□□□□ -0.09
SKA1-202ENST00000398452 MARC1Q5VT66 337 aa14.5□□□□□ -0.09
SKA1-202ENST00000398452 TRIM68Q6AZZ1 485 aa14.5□□□□□ -0.09
SKA1-202ENST00000398452 RHBDF2Q6PJF5 856 aa14.5□□□□□ -0.09
SKA1-202ENST00000398452 B4GALNT4Q76KP1 1039 aa14.5□□□□□ -0.09
SKA1-202ENST00000398452 METTL3Q86U44 580 aaKnown RBP14.5□□□□□ -0.09
SKA1-202ENST00000398452 RNF135Q8IUD6 432 aa14.5□□□□□ -0.09
SKA1-202ENST00000398452 DCAF4L2Q8NA75 395 aa14.5□□□□□ -0.09
SKA1-202ENST00000398452 OR7D4Q8NG98 312 aa14.5□□□□□ -0.09
SKA1-202ENST00000398452 ACDQ96AP0 544 aa14.5□□□□□ -0.09
SKA1-202ENST00000398452 SNF8Q96H20 258 aa14.5□□□□□ -0.09
SKA1-202ENST00000398452 ZFYVE19Q96K21 471 aa14.5□□□□□ -0.09
SKA1-202ENST00000398452 SPATA13Q96N96 652 aa14.5□□□□□ -0.09
SKA1-202ENST00000398452 ZNF599Q96NL3 588 aa14.5□□□□□ -0.09
SKA1-202ENST00000398452 C10orf88Q9H8K7 445 aa14.5□□□□□ -0.09
SKA1-202ENST00000398452 ECT2Q9H8V3 914 aa14.5□□□□□ -0.09
SKA1-202ENST00000398452 RYDENQ9NUL5 291 aaKnown RBP14.5□□□□□ -0.09
SKA1-202ENST00000398452 DNAJC17Q9NVM6 304 aaKnown RBP14.5□□□□□ -0.09
SKA1-202ENST00000398452 ARGLU1Q9NWB6 273 aaPredicted RBP14.5□□□□□ -0.09
SKA1-202ENST00000398452 UBA2Q9UBT2 640 aaPredicted RBP14.5□□□□□ -0.09
SKA1-202ENST00000398452 ZNF212Q9UDV6 495 aa14.5□□□□□ -0.09
SKA1-202ENST00000398452 SLC25A13Q9UJS0 675 aa14.5□□□□□ -0.09
SKA1-202ENST00000398452 NUMBLQ9Y6R0 609 aa14.5□□□□□ -0.09
SKA1-202ENST00000398452 A0A0D9SEW6 157 aa14.49□□□□□ -0.09
SKA1-202ENST00000398452 C5orf60A6NFR6 353 aa14.49□□□□□ -0.09
SKA1-202ENST00000398452 KCNK1O00180 336 aa14.49□□□□□ -0.09
SKA1-202ENST00000398452 HOXC11O43248 304 aaPredicted RBP14.49□□□□□ -0.09
SKA1-202ENST00000398452 MAFKO60675 156 aa14.49□□□□□ -0.09
SKA1-202ENST00000398452 ERLIN1O75477 346 aa14.49□□□□□ -0.09
SKA1-202ENST00000398452 GCATO75600 419 aa14.49□□□□□ -0.09
SKA1-202ENST00000398452 JCHAINP01591 159 aa14.49□□□□□ -0.09
SKA1-202ENST00000398452 PABPC1P11940 636 aaKnown RBP14.49□□□□□ -0.09
SKA1-202ENST00000398452 ARSAP15289 507 aa14.49□□□□□ -0.09
SKA1-202ENST00000398452 ACVRL1P37023 503 aa14.49□□□□□ -0.09
SKA1-202ENST00000398452 FDFT1P37268 417 aa14.49□□□□□ -0.09
SKA1-202ENST00000398452 PLA2G5P39877 138 aa14.49□□□□□ -0.09
SKA1-202ENST00000398452 NNMTP40261 264 aa14.49□□□□□ -0.09
SKA1-202ENST00000398452 DGKGP49619 791 aa14.49□□□□□ -0.09
SKA1-202ENST00000398452 CAV1Q03135 178 aa14.49□□□□□ -0.09
SKA1-202ENST00000398452 ITKQ08881 620 aa14.49□□□□□ -0.09
SKA1-202ENST00000398452 LMAN2Q12907 356 aa14.49□□□□□ -0.09
SKA1-202ENST00000398452 HNRNPDQ14103 355 aaKnown RBP14.49□□□□□ -0.09
SKA1-202ENST00000398452 RFTN1Q14699 578 aaPredicted RBP14.49□□□□□ -0.09
SKA1-202ENST00000398452 ELF2Q15723 593 aa14.49□□□□□ -0.09
SKA1-202ENST00000398452 ITPRIPL2Q3MIP1 535 aa14.49□□□□□ -0.09
SKA1-202ENST00000398452 TEX44Q53QW1 395 aa14.49□□□□□ -0.09
SKA1-202ENST00000398452 ANKRD20A2Q5SQ80 823 aa14.49□□□□□ -0.09
SKA1-202ENST00000398452 ANKRD20A1Q5TYW2 823 aa14.49□□□□□ -0.09
SKA1-202ENST00000398452 ANKRD20A3Q5VUR7 823 aa14.49□□□□□ -0.09
SKA1-202ENST00000398452 GRAMD4Q6IC98 578 aa14.49□□□□□ -0.09
SKA1-202ENST00000398452 CXorf57Q6NSI4 855 aaKnown RBP14.49□□□□□ -0.09
SKA1-202ENST00000398452 TP53INP2Q8IXH6 220 aa14.49□□□□□ -0.09
SKA1-202ENST00000398452 AHI1Q8N157 1196 aa14.49□□□□□ -0.09
SKA1-202ENST00000398452 NAT16Q8N8M0 369 aa14.49□□□□□ -0.09
SKA1-202ENST00000398452 ST13P5Q8NFI4 369 aaPredicted RBP14.49□□□□□ -0.09
SKA1-202ENST00000398452 WFIKKN2Q8TEU8 576 aa14.49□□□□□ -0.09
SKA1-202ENST00000398452 USP33Q8TEY7 942 aa14.49□□□□□ -0.09
SKA1-202ENST00000398452 LRRN4Q8WUT4 740 aa14.49□□□□□ -0.09
SKA1-202ENST00000398452 IFT81Q8WYA0 676 aa14.49□□□□□ -0.09
SKA1-202ENST00000398452 FGF14Q92915 247 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms