RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 NPHP3-ACAD11A0A0J9YXS1 232 aa6.71□□□□□ -1.34
TM9SF4-202ENST00000398022 TISP43B9A030 160 aa6.71□□□□□ -1.34
TM9SF4-202ENST00000398022 B9A039 149 aa6.71□□□□□ -1.34
TM9SF4-202ENST00000398022 FPGTO14772 594 aa6.71□□□□□ -1.34
TM9SF4-202ENST00000398022 AOC2O75106 756 aa6.71□□□□□ -1.34
TM9SF4-202ENST00000398022 DGAT1O75907 488 aa6.71□□□□□ -1.34
TM9SF4-202ENST00000398022 CHEK2O96017 543 aa6.71□□□□□ -1.34
TM9SF4-202ENST00000398022 PFKMP08237 780 aa6.71□□□□□ -1.34
TM9SF4-202ENST00000398022 SNHG28P0DPA3 235 aa6.71□□□□□ -1.34
TM9SF4-202ENST00000398022 GSTT1P30711 240 aa6.71□□□□□ -1.34
TM9SF4-202ENST00000398022 PCYT1AP49585 367 aa6.71□□□□□ -1.34
TM9SF4-202ENST00000398022 P2RX3P56373 397 aa6.71□□□□□ -1.34
TM9SF4-202ENST00000398022 GBX1Q14549 363 aa6.71□□□□□ -1.34
TM9SF4-202ENST00000398022 SNRNP48Q6IEG0 339 aaKnown RBP6.71□□□□□ -1.34
TM9SF4-202ENST00000398022 POTEGQ6S5H5 508 aa6.71□□□□□ -1.34
TM9SF4-202ENST00000398022 IDO2Q6ZQW0 420 aa6.71□□□□□ -1.34
TM9SF4-202ENST00000398022 ZNF227Q86WZ6 799 aa6.71□□□□□ -1.34
TM9SF4-202ENST00000398022 PSTKQ8IV42 348 aaKnown RBP6.71□□□□□ -1.34
TM9SF4-202ENST00000398022 NIM1KQ8IY84 436 aa6.71□□□□□ -1.34
TM9SF4-202ENST00000398022 FUKQ8N0W3 1084 aa6.71□□□□□ -1.34
TM9SF4-202ENST00000398022 MPP5Q8N3R9 675 aa6.71□□□□□ -1.34
TM9SF4-202ENST00000398022 AFAP1L2Q8N4X5 818 aa6.71□□□□□ -1.34
TM9SF4-202ENST00000398022 PCYOX1LQ8NBM8 494 aa6.71□□□□□ -1.34
TM9SF4-202ENST00000398022 XPO6Q96QU8 1125 aaKnown RBP6.71□□□□□ -1.34
TM9SF4-202ENST00000398022 MFRPQ9BY79 579 aa6.71□□□□□ -1.34
TM9SF4-202ENST00000398022 GOLPH3Q9H4A6 298 aa6.71□□□□□ -1.34
TM9SF4-202ENST00000398022 RC3H2Q9HBD1 1191 aaKnown RBP6.71□□□□□ -1.34
TM9SF4-202ENST00000398022 IL19Q9UHD0 177 aa6.71□□□□□ -1.34
TM9SF4-202ENST00000398022 PCDHA2Q9Y5H9 948 aa6.71□□□□□ -1.34
TM9SF4-202ENST00000398022 PHIPQ8WWQ0 1821 aa6.71□□□□□ -1.34
TM9SF4-202ENST00000398022 SLC9A3R1O14745 358 aaPredicted RBP6.71□□□□□ -1.34
TM9SF4-202ENST00000398022 SCAMP1O15126 338 aa6.71□□□□□ -1.34
TM9SF4-202ENST00000398022 IRAK2O43187 625 aa6.71□□□□□ -1.34
TM9SF4-202ENST00000398022 PEX11AO75192 247 aa6.71□□□□□ -1.34
TM9SF4-202ENST00000398022 TMEM253P0C7T8 217 aa6.71□□□□□ -1.34
TM9SF4-202ENST00000398022 GHRP10912 638 aa6.71□□□□□ -1.34
TM9SF4-202ENST00000398022 KRT5P13647 590 aa6.71□□□□□ -1.34
TM9SF4-202ENST00000398022 ALDH4A1P30038 563 aa6.71□□□□□ -1.34
TM9SF4-202ENST00000398022 DSG3P32926 999 aa6.71□□□□□ -1.34
TM9SF4-202ENST00000398022 CIITAP33076 1130 aa6.71□□□□□ -1.34
TM9SF4-202ENST00000398022 NOVP48745 357 aa6.71□□□□□ -1.34
TM9SF4-202ENST00000398022 GALCP54803 685 aa6.71□□□□□ -1.34
TM9SF4-202ENST00000398022 MFAP3P55082 362 aa6.71□□□□□ -1.34
TM9SF4-202ENST00000398022 PRKCZQ05513 592 aa6.71□□□□□ -1.34
TM9SF4-202ENST00000398022 BFSP1Q12934 665 aa6.71□□□□□ -1.34
TM9SF4-202ENST00000398022 LSAMPQ13449 338 aa6.71□□□□□ -1.34
TM9SF4-202ENST00000398022 LPIN1Q14693 890 aa6.71□□□□□ -1.34
TM9SF4-202ENST00000398022 ARHGAP19Q14CB8 494 aa6.71□□□□□ -1.34
TM9SF4-202ENST00000398022 UAP1Q16222 522 aaPredicted RBP6.71□□□□□ -1.34
TM9SF4-202ENST00000398022 PRR16Q569H4 304 aa6.71□□□□□ -1.34
TM9SF4-202ENST00000398022 SLFN13Q68D06 897 aa6.71□□□□□ -1.34
TM9SF4-202ENST00000398022 SLFN11Q7Z7L1 901 aa6.71□□□□□ -1.34
TM9SF4-202ENST00000398022 NT5DC3Q86UY8 548 aa6.71□□□□□ -1.34
TM9SF4-202ENST00000398022 DTX3Q8N9I9 347 aa6.71□□□□□ -1.34
TM9SF4-202ENST00000398022 HDAC10Q969S8 669 aa6.71□□□□□ -1.34
TM9SF4-202ENST00000398022 TRIM43Q96BQ3 446 aaPredicted RBP6.71□□□□□ -1.34
TM9SF4-202ENST00000398022 CCDC17Q96LX7 622 aa6.71□□□□□ -1.34
TM9SF4-202ENST00000398022 SYNGAP1Q96PV0 1343 aa6.71□□□□□ -1.34
TM9SF4-202ENST00000398022 ADAM33Q9BZ11 813 aa6.71□□□□□ -1.34
TM9SF4-202ENST00000398022 TMEM245Q9H330 911 aa6.71□□□□□ -1.34
TM9SF4-202ENST00000398022 PKD2L2Q9NZM6 624 aa6.71□□□□□ -1.34
TM9SF4-202ENST00000398022 BTBD7Q9P203 1132 aa6.71□□□□□ -1.34
TM9SF4-202ENST00000398022 DNAJB4Q9UDY4 337 aa6.71□□□□□ -1.34
TM9SF4-202ENST00000398022 TBC1D29Q9UFV1 150 aa6.71□□□□□ -1.34
TM9SF4-202ENST00000398022 PCDHGA11Q9Y5H2 935 aa6.71□□□□□ -1.34
TM9SF4-202ENST00000398022 ALPK3Q96L96 1907 aa6.7□□□□□ -1.34
TM9SF4-202ENST00000398022 A0A0A6YYJ9 748 aa6.7□□□□□ -1.34
TM9SF4-202ENST00000398022 GSTTP1A0A1W2PQM5 241 aa6.7□□□□□ -1.34
TM9SF4-202ENST00000398022 C5orf60A6NFR6 353 aa6.7□□□□□ -1.34
TM9SF4-202ENST00000398022 ZNF879B4DU55 563 aa6.7□□□□□ -1.34
TM9SF4-202ENST00000398022 PRSS44E7EML9 344 aa6.7□□□□□ -1.34
TM9SF4-202ENST00000398022 SLCO1B7G3V0H7 640 aa6.7□□□□□ -1.34
TM9SF4-202ENST00000398022 H0YGN5 161 aa6.7□□□□□ -1.34
TM9SF4-202ENST00000398022 PDE5AO76074 875 aa6.7□□□□□ -1.34
TM9SF4-202ENST00000398022 ANP32DO95626 131 aa6.7□□□□□ -1.34
TM9SF4-202ENST00000398022 POU2F2P09086 479 aa6.7□□□□□ -1.34
TM9SF4-202ENST00000398022 MYCLP12524 364 aaPredicted RBP6.7□□□□□ -1.34
TM9SF4-202ENST00000398022 PAMP19021 973 aa6.7□□□□□ -1.34
TM9SF4-202ENST00000398022 GALP22466 123 aa6.7□□□□□ -1.34
TM9SF4-202ENST00000398022 RPA1P27694 616 aa6.7□□□□□ -1.34
TM9SF4-202ENST00000398022 STARP49675 285 aa6.7□□□□□ -1.34
TM9SF4-202ENST00000398022 ZNF135P52742 658 aaPredicted RBP6.7□□□□□ -1.34
TM9SF4-202ENST00000398022 PTENP60484 403 aa6.7□□□□□ -1.34
TM9SF4-202ENST00000398022 ANKRD20A8PQ5CZ79 823 aa6.7□□□□□ -1.34
TM9SF4-202ENST00000398022 ANKRD20A2Q5SQ80 823 aa6.7□□□□□ -1.34
TM9SF4-202ENST00000398022 SEL1L2Q5TEA6 688 aa6.7□□□□□ -1.34
TM9SF4-202ENST00000398022 SAMD7Q7Z3H4 446 aa6.7□□□□□ -1.34
TM9SF4-202ENST00000398022 DSG4Q86SJ6 1040 aa6.7□□□□□ -1.34
TM9SF4-202ENST00000398022 LDHDQ86WU2 507 aa6.7□□□□□ -1.34
TM9SF4-202ENST00000398022 NUP85Q9BW27 656 aa6.7□□□□□ -1.34
TM9SF4-202ENST00000398022 NFKBIZQ9BYH8 718 aa6.7□□□□□ -1.34
TM9SF4-202ENST00000398022 KCNK13Q9HB14 408 aa6.7□□□□□ -1.34
TM9SF4-202ENST00000398022 DDX4Q9NQI0 724 aaKnown RBP6.7□□□□□ -1.34
TM9SF4-202ENST00000398022 UCKL1Q9NWZ5 548 aa6.7□□□□□ -1.34
TM9SF4-202ENST00000398022 TAS2R3Q9NYW6 316 aa6.7□□□□□ -1.34
TM9SF4-202ENST00000398022 UXTQ9UBK9 157 aaPredicted RBP6.7□□□□□ -1.34
TM9SF4-202ENST00000398022 CPSF3Q9UKF6 684 aaKnown RBP6.7□□□□□ -1.34
TM9SF4-202ENST00000398022 NR2E3Q9Y5X4 410 aa6.7□□□□□ -1.34
TM9SF4-202ENST00000398022 NFS1Q9Y697 457 aa6.7□□□□□ -1.34
TM9SF4-202ENST00000398022 A0A1B0GTQ1 180 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms