RNA–Protein interactions for RNA: ENST00000398005.3

HMGN2P39-201, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 39, humanhuman

BASIC

Gene HMGN2P39, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P39-201ENST00000398005 HMBOX1Q6NT76 420 aa2.2□□□□□ -2.06
HMGN2P39-201ENST00000398005 EFCAB12Q6NXP0 572 aa2.2□□□□□ -2.06
HMGN2P39-201ENST00000398005 WDR93Q6P2C0 686 aa2.2□□□□□ -2.06
HMGN2P39-201ENST00000398005 KDELC1Q6UW63 502 aa2.2□□□□□ -2.06
HMGN2P39-201ENST00000398005 ZNF574Q6ZN55 896 aaPredicted RBP2.2□□□□□ -2.06
HMGN2P39-201ENST00000398005 MSANTD1Q6ZTZ1 278 aa2.2□□□□□ -2.06
HMGN2P39-201ENST00000398005 USP30Q70CQ3 517 aa2.2□□□□□ -2.06
HMGN2P39-201ENST00000398005 ERN2Q76MJ5 926 aaKnown RBP2.2□□□□□ -2.06
HMGN2P39-201ENST00000398005 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP2.2□□□□□ -2.06
HMGN2P39-201ENST00000398005 IQUBQ8NA54 791 aa2.2□□□□□ -2.06
HMGN2P39-201ENST00000398005 ZBTB44Q8NCP5 570 aa2.2□□□□□ -2.06
HMGN2P39-201ENST00000398005 ZNF540Q8NDQ6 660 aa2.2□□□□□ -2.06
HMGN2P39-201ENST00000398005 IPMKQ8NFU5 416 aa2.2□□□□□ -2.06
HMGN2P39-201ENST00000398005 NSMCE1Q8WV22 266 aa2.2□□□□□ -2.06
HMGN2P39-201ENST00000398005 OSCP1Q8WVF1 389 aa2.2□□□□□ -2.06
HMGN2P39-201ENST00000398005 RAB40AQ8WXH6 277 aa2.2□□□□□ -2.06
HMGN2P39-201ENST00000398005 CPA5Q8WXQ8 436 aa2.2□□□□□ -2.06
HMGN2P39-201ENST00000398005 SEPT1Q8WYJ6 367 aa2.2□□□□□ -2.06
HMGN2P39-201ENST00000398005 OVCA2Q8WZ82 227 aa2.2□□□□□ -2.06
HMGN2P39-201ENST00000398005 NPIPB3Q92617 1050 aa2.2□□□□□ -2.06
HMGN2P39-201ENST00000398005 MR1Q95460 341 aa2.2□□□□□ -2.06
HMGN2P39-201ENST00000398005 PTERQ96BW5 349 aa2.2□□□□□ -2.06
HMGN2P39-201ENST00000398005 MIEF2Q96C03 454 aa2.2□□□□□ -2.06
HMGN2P39-201ENST00000398005 HDAC11Q96DB2 347 aa2.2□□□□□ -2.06
HMGN2P39-201ENST00000398005 SHISA4Q96DD7 197 aa2.2□□□□□ -2.06
HMGN2P39-201ENST00000398005 LRIG1Q96JA1 1093 aa2.2□□□□□ -2.06
HMGN2P39-201ENST00000398005 VPS50Q96JG6 964 aa2.2□□□□□ -2.06
HMGN2P39-201ENST00000398005 CFAP57Q96MR6 1250 aa2.2□□□□□ -2.06
HMGN2P39-201ENST00000398005 FIZ1Q96SL8 496 aa2.2□□□□□ -2.06
HMGN2P39-201ENST00000398005 PKP4Q99569 1192 aa2.2□□□□□ -2.06
HMGN2P39-201ENST00000398005 MGME1Q9BQP7 344 aa2.2□□□□□ -2.06
HMGN2P39-201ENST00000398005 CLSTN3Q9BQT9 956 aa2.2□□□□□ -2.06
HMGN2P39-201ENST00000398005 C17orf80Q9BSJ5 609 aa2.2□□□□□ -2.06
HMGN2P39-201ENST00000398005 DPCDQ9BVM2 203 aaPredicted RBP2.2□□□□□ -2.06
HMGN2P39-201ENST00000398005 NPLQ9BXD5 320 aaPredicted RBP2.2□□□□□ -2.06
HMGN2P39-201ENST00000398005 VN1R3Q9BXE9 311 aa2.2□□□□□ -2.06
HMGN2P39-201ENST00000398005 TEX13BQ9BXU2 312 aa2.2□□□□□ -2.06
HMGN2P39-201ENST00000398005 MRPL1Q9BYD6 325 aaKnown RBP2.2□□□□□ -2.06
HMGN2P39-201ENST00000398005 IFIH1Q9BYX4 1025 aaKnown RBP2.2□□□□□ -2.06
HMGN2P39-201ENST00000398005 TRIM31Q9BZY9 425 aa2.2□□□□□ -2.06
HMGN2P39-201ENST00000398005 REXO4Q9GZR2 422 aaKnown RBP2.2□□□□□ -2.06
HMGN2P39-201ENST00000398005 SLC5A7Q9GZV3 580 aa2.2□□□□□ -2.06
HMGN2P39-201ENST00000398005 RNF32Q9H0A6 362 aa2.2□□□□□ -2.06
HMGN2P39-201ENST00000398005 OR10A2Q9H208 303 aa2.2□□□□□ -2.06
HMGN2P39-201ENST00000398005 SLC6A15Q9H2J7 730 aa2.2□□□□□ -2.06
HMGN2P39-201ENST00000398005 HRH4Q9H3N8 390 aa2.2□□□□□ -2.06
HMGN2P39-201ENST00000398005 PCDH18Q9HCL0 1135 aa2.2□□□□□ -2.06
HMGN2P39-201ENST00000398005 IL1RAPL2Q9NP60 686 aa2.2□□□□□ -2.06
HMGN2P39-201ENST00000398005 IL23AQ9NPF7 189 aa2.2□□□□□ -2.06
HMGN2P39-201ENST00000398005 C20orf141Q9NUB4 165 aa2.2□□□□□ -2.06
HMGN2P39-201ENST00000398005 ABCB8Q9NUT2 735 aa2.2□□□□□ -2.06
HMGN2P39-201ENST00000398005 ANO10Q9NW15 660 aa2.2□□□□□ -2.06
HMGN2P39-201ENST00000398005 BABAM1Q9NWV8 329 aa2.2□□□□□ -2.06
HMGN2P39-201ENST00000398005 CHCHD3Q9NX63 227 aaKnown RBP2.2□□□□□ -2.06
HMGN2P39-201ENST00000398005 OGFRQ9NZT2 677 aa2.2□□□□□ -2.06
HMGN2P39-201ENST00000398005 DLGAP2Q9P1A6 1054 aa2.2□□□□□ -2.06
HMGN2P39-201ENST00000398005 ACTR3BQ9P1U1 418 aa2.2□□□□□ -2.06
HMGN2P39-201ENST00000398005 FETUBQ9UGM5 382 aa2.2□□□□□ -2.06
HMGN2P39-201ENST00000398005 ARMCX3Q9UH62 379 aaPredicted RBP2.2□□□□□ -2.06
HMGN2P39-201ENST00000398005 SLC25A13Q9UJS0 675 aa2.2□□□□□ -2.06
HMGN2P39-201ENST00000398005 SERTAD3Q9UJW9 196 aa2.2□□□□□ -2.06
HMGN2P39-201ENST00000398005 OSGIN1Q9UJX0 560 aa2.2□□□□□ -2.06
HMGN2P39-201ENST00000398005 ANAPC2Q9UJX6 822 aa2.2□□□□□ -2.06
HMGN2P39-201ENST00000398005 FBXL5Q9UKA1 691 aa2.2□□□□□ -2.06
HMGN2P39-201ENST00000398005 PADI1Q9ULC6 663 aa2.2□□□□□ -2.06
HMGN2P39-201ENST00000398005 SLC5A6Q9Y289 635 aa2.2□□□□□ -2.06
HMGN2P39-201ENST00000398005 KCNK7Q9Y2U2 307 aa2.2□□□□□ -2.06
HMGN2P39-201ENST00000398005 SH3BP1Q9Y3L3 701 aa2.2□□□□□ -2.06
HMGN2P39-201ENST00000398005 EPN1Q9Y6I3 576 aaPredicted RBP2.2□□□□□ -2.06
HMGN2P39-201ENST00000398005 A0A1W2PQF6 199 aa2.19□□□□□ -2.06
HMGN2P39-201ENST00000398005 TCRBV21S2A2A0A5A6 115 aa2.19□□□□□ -2.06
HMGN2P39-201ENST00000398005 UBE2QL1A1L167 161 aa2.19□□□□□ -2.06
HMGN2P39-201ENST00000398005 OR14I1A6ND48 311 aa2.19□□□□□ -2.06
HMGN2P39-201ENST00000398005 LRRC72A6NJI9 287 aa2.19□□□□□ -2.06
HMGN2P39-201ENST00000398005 C3orf70A6NLC5 250 aaPredicted RBP2.19□□□□□ -2.06
HMGN2P39-201ENST00000398005 CDRT15L2A8MXV6 281 aa2.19□□□□□ -2.06
HMGN2P39-201ENST00000398005 F5H697 171 aa2.19□□□□□ -2.06
HMGN2P39-201ENST00000398005 K7EPI3 171 aa2.19□□□□□ -2.06
HMGN2P39-201ENST00000398005 QSOX1O00391 747 aa2.19□□□□□ -2.06
HMGN2P39-201ENST00000398005 ABLIM1O14639 778 aa2.19□□□□□ -2.06
HMGN2P39-201ENST00000398005 FFAR3O14843 346 aa2.19□□□□□ -2.06
HMGN2P39-201ENST00000398005 ADAMDEC1O15204 470 aa2.19□□□□□ -2.06
HMGN2P39-201ENST00000398005 ZNF185O15231 689 aa2.19□□□□□ -2.06
HMGN2P39-201ENST00000398005 GPR42O15529 346 aa2.19□□□□□ -2.06
HMGN2P39-201ENST00000398005 CCNT1O60563 726 aaKnown RBP2.19□□□□□ -2.06
HMGN2P39-201ENST00000398005 PAGE4O60829 102 aa2.19□□□□□ -2.06
HMGN2P39-201ENST00000398005 SMPD2O60906 423 aa2.19□□□□□ -2.06
HMGN2P39-201ENST00000398005 AVILO75366 819 aa2.19□□□□□ -2.06
HMGN2P39-201ENST00000398005 ERN1O75460 977 aaKnown RBP2.19□□□□□ -2.06
HMGN2P39-201ENST00000398005 NDUFS3O75489 264 aa2.19□□□□□ -2.06
HMGN2P39-201ENST00000398005 BCAS2O75934 225 aaPredicted RBP2.19□□□□□ -2.06
HMGN2P39-201ENST00000398005 PRSS23O95084 383 aa2.19□□□□□ -2.06
HMGN2P39-201ENST00000398005 ALDOAP04075 364 aaKnown RBP2.19□□□□□ -2.06
HMGN2P39-201ENST00000398005 HLA-DOAP06340 250 aa2.19□□□□□ -2.06
HMGN2P39-201ENST00000398005 CSF1RP07333 972 aa2.19□□□□□ -2.06
HMGN2P39-201ENST00000398005 CHRM4P08173 479 aa2.19□□□□□ -2.06
HMGN2P39-201ENST00000398005 SRPRAP08240 638 aaKnown RBP2.19□□□□□ -2.06
HMGN2P39-201ENST00000398005 PDHA1P08559 390 aa2.19□□□□□ -2.06
HMGN2P39-201ENST00000398005 CYP3A4P08684 503 aa2.19□□□□□ -2.06
HMGN2P39-201ENST00000398005 CYP2A6P11509 494 aaPredicted RBP2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms