RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 IL10RBQ08334 325 aa21.61■■□□□ 1.05
CPNE1-204ENST00000397443 ASTLQ6HA08 431 aaPredicted RBP21.61■■□□□ 1.05
CPNE1-204ENST00000397443 NSMCE1Q8WV22 266 aa21.61■■□□□ 1.05
CPNE1-204ENST00000397443 ATP2A3Q93084 1043 aa21.61■■□□□ 1.05
CPNE1-204ENST00000397443 ETNK1Q9HBU6 452 aa21.61■■□□□ 1.05
CPNE1-204ENST00000397443 KIAA1522Q9P206 1035 aaPredicted RBP21.61■■□□□ 1.05
CPNE1-204ENST00000397443 TPX2Q9ULW0 747 aaKnown RBP21.61■■□□□ 1.05
CPNE1-204ENST00000397443 NUMBLQ9Y6R0 609 aa21.61■■□□□ 1.05
CPNE1-204ENST00000397443 MBTPS2O43462 519 aa21.61■■□□□ 1.05
CPNE1-204ENST00000397443 KDELR3O43731 214 aa21.61■■□□□ 1.05
CPNE1-204ENST00000397443 OPHN1O60890 802 aa21.61■■□□□ 1.05
CPNE1-204ENST00000397443 PEX11BO96011 259 aa21.61■■□□□ 1.05
CPNE1-204ENST00000397443 PSMC3P17980 439 aa21.61■■□□□ 1.05
CPNE1-204ENST00000397443 ECHS1P30084 290 aa21.61■■□□□ 1.05
CPNE1-204ENST00000397443 DRG2P55039 364 aaKnown RBP21.61■■□□□ 1.05
CPNE1-204ENST00000397443 MARC1Q5VT66 337 aa21.61■■□□□ 1.05
CPNE1-204ENST00000397443 ANKRD22Q5VYY1 191 aa21.61■■□□□ 1.05
CPNE1-204ENST00000397443 ZDHHC24Q6UX98 284 aa21.61■■□□□ 1.05
CPNE1-204ENST00000397443 CNTD1Q8N815 330 aa21.61■■□□□ 1.05
CPNE1-204ENST00000397443 RUBCNQ92622 972 aa21.61■■□□□ 1.05
CPNE1-204ENST00000397443 HLA-CQ95604 372 aa21.61■■□□□ 1.05
CPNE1-204ENST00000397443 E2F7Q96AV8 911 aa21.61■■□□□ 1.05
CPNE1-204ENST00000397443 ELSPBP1Q96BH3 223 aa21.61■■□□□ 1.05
CPNE1-204ENST00000397443 FAM83CQ9BQN1 747 aa21.61■■□□□ 1.05
CPNE1-204ENST00000397443 NT5MQ9NPB1 228 aa21.61■■□□□ 1.05
CPNE1-204ENST00000397443 WHRNQ9P202 907 aa21.61■■□□□ 1.05
CPNE1-204ENST00000397443 RSPH14Q9UHP6 348 aa21.61■■□□□ 1.05
CPNE1-204ENST00000397443 TCRBV7S3A2A0A539 114 aa21.6■■□□□ 1.05
CPNE1-204ENST00000397443 NFATC1O95644 943 aa21.6■■□□□ 1.05
CPNE1-204ENST00000397443 HLA-DQB2P05538 268 aa21.6■■□□□ 1.05
CPNE1-204ENST00000397443 FAM153BP0C7A2 387 aa21.6■■□□□ 1.05
CPNE1-204ENST00000397443 ITIH2P19823 946 aa21.6■■□□□ 1.05
CPNE1-204ENST00000397443 NFKB1P19838 968 aa21.6■■□□□ 1.05
CPNE1-204ENST00000397443 GDI1P31150 447 aa21.6■■□□□ 1.05
CPNE1-204ENST00000397443 CD68P34810 354 aaPredicted RBP21.6■■□□□ 1.05
CPNE1-204ENST00000397443 IFI35P80217 286 aaPredicted RBP21.6■■□□□ 1.05
CPNE1-204ENST00000397443 ITKQ08881 620 aa21.6■■□□□ 1.05
CPNE1-204ENST00000397443 FCHO2Q0JRZ9 810 aa21.6■■□□□ 1.05
CPNE1-204ENST00000397443 SMAD4Q13485 552 aaKnown RBP21.6■■□□□ 1.05
CPNE1-204ENST00000397443 FAM153CQ494X1 144 aa21.6■■□□□ 1.05
CPNE1-204ENST00000397443 CPT1BQ92523 772 aa21.6■■□□□ 1.05
CPNE1-204ENST00000397443 PWWP2AQ96N64 755 aa21.6■■□□□ 1.05
CPNE1-204ENST00000397443 ACE2Q9BYF1 805 aaPredicted RBP21.6■■□□□ 1.05
CPNE1-204ENST00000397443 ECT2Q9H8V3 914 aa21.6■■□□□ 1.05
CPNE1-204ENST00000397443 HPS4Q9NQG7 708 aa21.6■■□□□ 1.05
CPNE1-204ENST00000397443 GTSE1Q9NYZ3 720 aa21.6■■□□□ 1.05
CPNE1-204ENST00000397443 FAM153AQ9UHL3 310 aa21.6■■□□□ 1.05
CPNE1-204ENST00000397443 OR51B4Q9Y5P0 310 aa21.6■■□□□ 1.05
CPNE1-204ENST00000397443 TP73O15350 636 aa21.59■■□□□ 1.05
CPNE1-204ENST00000397443 APRTP07741 180 aa21.59■■□□□ 1.05
CPNE1-204ENST00000397443 MAXP61244 160 aa21.59■■□□□ 1.05
CPNE1-204ENST00000397443 MTM1Q13496 603 aa21.59■■□□□ 1.05
CPNE1-204ENST00000397443 LBRQ14739 615 aaKnown RBP21.59■■□□□ 1.05
CPNE1-204ENST00000397443 GPR153Q6NV75 609 aa21.59■■□□□ 1.05
CPNE1-204ENST00000397443 FBXO38Q6PIJ6 1188 aa21.59■■□□□ 1.05
CPNE1-204ENST00000397443 ZNF783Q6ZMS7 281 aa21.59■■□□□ 1.05
CPNE1-204ENST00000397443 C12orf40Q86WS4 652 aa21.59■■□□□ 1.05
CPNE1-204ENST00000397443 ALG14Q96F25 216 aa21.59■■□□□ 1.05
CPNE1-204ENST00000397443 TEKT5Q96M29 485 aa21.59■■□□□ 1.05
CPNE1-204ENST00000397443 IL12RB2Q99665 862 aa21.59■■□□□ 1.05
CPNE1-204ENST00000397443 PDFQ9HBH1 243 aa21.59■■□□□ 1.05
CPNE1-204ENST00000397443 ZDHHC18Q9NUE0 388 aa21.59■■□□□ 1.05
CPNE1-204ENST00000397443 DNAJC17Q9NVM6 304 aaKnown RBP21.59■■□□□ 1.05
CPNE1-204ENST00000397443 UBP1Q9NZI7 540 aa21.59■■□□□ 1.05
CPNE1-204ENST00000397443 MARK1Q9P0L2 795 aa21.59■■□□□ 1.05
CPNE1-204ENST00000397443 UBA2Q9UBT2 640 aaPredicted RBP21.59■■□□□ 1.05
CPNE1-204ENST00000397443 VPS51Q9UID3 782 aa21.59■■□□□ 1.05
CPNE1-204ENST00000397443 INTS6Q9UL03 887 aaKnown RBP21.59■■□□□ 1.05
CPNE1-204ENST00000397443 TTC24A2A3L6 582 aaPredicted RBP21.59■■□□□ 1.05
CPNE1-204ENST00000397443 C2CD4DB7Z1M9 353 aa21.59■■□□□ 1.05
CPNE1-204ENST00000397443 E7EVH7 732 aa21.59■■□□□ 1.05
CPNE1-204ENST00000397443 TNFRSF8P28908 595 aa21.59■■□□□ 1.05
CPNE1-204ENST00000397443 MMP13P45452 471 aa21.59■■□□□ 1.05
CPNE1-204ENST00000397443 RENBPP51606 427 aa21.59■■□□□ 1.05
CPNE1-204ENST00000397443 ARF5P84085 180 aa21.59■■□□□ 1.05
CPNE1-204ENST00000397443 GAD2Q05329 585 aa21.59■■□□□ 1.05
CPNE1-204ENST00000397443 PDGFRLQ15198 375 aa21.59■■□□□ 1.05
CPNE1-204ENST00000397443 PLEKHG6Q3KR16 790 aa21.59■■□□□ 1.05
CPNE1-204ENST00000397443 RNASEH2BQ5TBB1 312 aaKnown RBP21.59■■□□□ 1.05
CPNE1-204ENST00000397443 RNF43Q68DV7 783 aa21.59■■□□□ 1.05
CPNE1-204ENST00000397443 MAML1Q92585 1016 aa21.59■■□□□ 1.05
CPNE1-204ENST00000397443 ART4Q93070 314 aa21.59■■□□□ 1.05
CPNE1-204ENST00000397443 VAT1Q99536 393 aa21.59■■□□□ 1.05
CPNE1-204ENST00000397443 GGA2Q9UJY4 613 aa21.59■■□□□ 1.05
CPNE1-204ENST00000397443 TRHDEQ9UKU6 1024 aa21.59■■□□□ 1.05
CPNE1-204ENST00000397443 TUBBP07437 444 aa21.58■■□□□ 1.04
CPNE1-204ENST00000397443 LMAN1P49257 510 aa21.58■■□□□ 1.04
CPNE1-204ENST00000397443 HNRNPDQ14103 355 aaKnown RBP21.58■■□□□ 1.04
CPNE1-204ENST00000397443 FUT11Q495W5 492 aa21.58■■□□□ 1.04
CPNE1-204ENST00000397443 TMCO4Q5TGY1 634 aa21.58■■□□□ 1.04
CPNE1-204ENST00000397443 HIBCHQ6NVY1 386 aaPredicted RBP21.58■■□□□ 1.04
CPNE1-204ENST00000397443 MTSS1LQ765P7 747 aa21.58■■□□□ 1.04
CPNE1-204ENST00000397443 CCDC25Q86WR0 208 aa21.58■■□□□ 1.04
CPNE1-204ENST00000397443 PPIL6Q8IXY8 311 aa21.58■■□□□ 1.04
CPNE1-204ENST00000397443 TRMT61BQ9BVS5 477 aaKnown RBP21.58■■□□□ 1.04
CPNE1-204ENST00000397443 EPS15L1Q9UBC2 864 aa21.58■■□□□ 1.04
CPNE1-204ENST00000397443 ECI2O75521 394 aa21.57■■□□□ 1.04
CPNE1-204ENST00000397443 ZNF235Q14590 738 aa21.57■■□□□ 1.04
CPNE1-204ENST00000397443 PITRM1Q5JRX3 1037 aa21.57■■□□□ 1.04
CPNE1-204ENST00000397443 ITPRIPL1Q6GPH6 555 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms