RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 BNIP3LO60238 219 aa21.63■■□□□ 1.05
TSPAN4-206ENST00000397408 ZNF217O75362 1048 aa21.63■■□□□ 1.05
TSPAN4-206ENST00000397408 BCKDHBP21953 392 aa21.63■■□□□ 1.05
TSPAN4-206ENST00000397408 MRE11P49959 708 aa21.63■■□□□ 1.05
TSPAN4-206ENST00000397408 SERINC3Q13530 473 aa21.63■■□□□ 1.05
TSPAN4-206ENST00000397408 ELAVL3Q14576 367 aaKnown RBP21.63■■□□□ 1.05
TSPAN4-206ENST00000397408 C11orf63Q6NUN7 778 aa21.63■■□□□ 1.05
TSPAN4-206ENST00000397408 TMCO3Q6UWJ1 677 aa21.63■■□□□ 1.05
TSPAN4-206ENST00000397408 LEKR1Q6ZMV7 388 aa21.63■■□□□ 1.05
TSPAN4-206ENST00000397408 FAM160A2Q8N612 972 aaPredicted RBP21.63■■□□□ 1.05
TSPAN4-206ENST00000397408 FRMD1Q8N878 549 aa21.63■■□□□ 1.05
TSPAN4-206ENST00000397408 NETO2Q8NC67 525 aa21.63■■□□□ 1.05
TSPAN4-206ENST00000397408 SLC39A8Q9C0K1 460 aa21.63■■□□□ 1.05
TSPAN4-206ENST00000397408 ETNK2Q9NVF9 386 aa21.63■■□□□ 1.05
TSPAN4-206ENST00000397408 RAB23Q9ULC3 237 aa21.63■■□□□ 1.05
TSPAN4-206ENST00000397408 CYP8B1Q9UNU6 501 aa21.63■■□□□ 1.05
TSPAN4-206ENST00000397408 DUSP10Q9Y6W6 482 aa21.63■■□□□ 1.05
TSPAN4-206ENST00000397408 SDK1Q7Z5N4 2213 aa21.63■■□□□ 1.05
TSPAN4-206ENST00000397408 PLXND1Q9Y4D7 1925 aa21.63■■□□□ 1.05
TSPAN4-206ENST00000397408 BTNL10A8MVZ5 291 aa21.63■■□□□ 1.05
TSPAN4-206ENST00000397408 PJA2O43164 708 aa21.63■■□□□ 1.05
TSPAN4-206ENST00000397408 RNASEH1O60930 286 aaKnown RBP21.63■■□□□ 1.05
TSPAN4-206ENST00000397408 CD160O95971 181 aa21.63■■□□□ 1.05
TSPAN4-206ENST00000397408 LMNAP02545 664 aaKnown RBP21.63■■□□□ 1.05
TSPAN4-206ENST00000397408 ACADMP11310 421 aa21.63■■□□□ 1.05
TSPAN4-206ENST00000397408 TNNT1P13805 278 aa21.63■■□□□ 1.05
TSPAN4-206ENST00000397408 NAP1L1P55209 391 aaKnown RBP21.63■■□□□ 1.05
TSPAN4-206ENST00000397408 GEMIN4P57678 1058 aaKnown RBP21.63■■□□□ 1.05
TSPAN4-206ENST00000397408 RPS14P62263 151 aaKnown RBP21.63■■□□□ 1.05
TSPAN4-206ENST00000397408 SLC20A2Q08357 652 aa21.63■■□□□ 1.05
TSPAN4-206ENST00000397408 BYSLQ13895 437 aaKnown RBP21.63■■□□□ 1.05
TSPAN4-206ENST00000397408 PDK2Q15119 407 aa21.63■■□□□ 1.05
TSPAN4-206ENST00000397408 KBTBD6Q86V97 674 aa21.63■■□□□ 1.05
TSPAN4-206ENST00000397408 LRRC8AQ8IWT6 810 aa21.63■■□□□ 1.05
TSPAN4-206ENST00000397408 ARHGAP12Q8IWW6 846 aa21.63■■□□□ 1.05
TSPAN4-206ENST00000397408 RHOT1Q8IXI2 618 aa21.63■■□□□ 1.05
TSPAN4-206ENST00000397408 TXLNBQ8N3L3 684 aa21.63■■□□□ 1.05
TSPAN4-206ENST00000397408 SUMF1Q8NBK3 374 aa21.63■■□□□ 1.05
TSPAN4-206ENST00000397408 TPCN2Q8NHX9 752 aa21.63■■□□□ 1.05
TSPAN4-206ENST00000397408 ZNF670Q9BS34 389 aa21.63■■□□□ 1.05
TSPAN4-206ENST00000397408 USP36Q9P275 1121 aaKnown RBP21.63■■□□□ 1.05
TSPAN4-206ENST00000397408 FCF1Q9Y324 198 aaKnown RBP21.63■■□□□ 1.05
TSPAN4-206ENST00000397408 ALG6Q9Y672 507 aa21.63■■□□□ 1.05
TSPAN4-206ENST00000397408 ZFHX2Q9C0A1 2572 aaPredicted RBP21.62■■□□□ 1.05
TSPAN4-206ENST00000397408 IGHV1OR15-9A0A0B4J2B8 117 aa21.62■■□□□ 1.05
TSPAN4-206ENST00000397408 CXorf51AA0A1B0GTR3 108 aa21.62■■□□□ 1.05
TSPAN4-206ENST00000397408 LRRD1A4D1F6 860 aa21.62■■□□□ 1.05
TSPAN4-206ENST00000397408 ZSCAN5CA6NGD5 496 aaPredicted RBP21.62■■□□□ 1.05
TSPAN4-206ENST00000397408 ARHGAP42A6NI28 874 aa21.62■■□□□ 1.05
TSPAN4-206ENST00000397408 ARHGAP6O43182 974 aa21.62■■□□□ 1.05
TSPAN4-206ENST00000397408 DNTTP04053 509 aa21.62■■□□□ 1.05
TSPAN4-206ENST00000397408 IL4RP24394 825 aa21.62■■□□□ 1.05
TSPAN4-206ENST00000397408 LRRC38Q5VT99 294 aa21.62■■□□□ 1.05
TSPAN4-206ENST00000397408 AFMIDQ63HM1 303 aa21.62■■□□□ 1.05
TSPAN4-206ENST00000397408 DAAM2Q86T65 1068 aa21.62■■□□□ 1.05
TSPAN4-206ENST00000397408 METTL3Q86U44 580 aaKnown RBP21.62■■□□□ 1.05
TSPAN4-206ENST00000397408 C11orf74Q86VG3 221 aa21.62■■□□□ 1.05
TSPAN4-206ENST00000397408 MMAAQ8IVH4 418 aaKnown RBP21.62■■□□□ 1.05
TSPAN4-206ENST00000397408 MAP7D3Q8IWC1 876 aa21.62■■□□□ 1.05
TSPAN4-206ENST00000397408 OR8D1Q8WZ84 308 aa21.62■■□□□ 1.05
TSPAN4-206ENST00000397408 RAPGEF5Q92565 580 aa21.62■■□□□ 1.05
TSPAN4-206ENST00000397408 CEP44Q9C0F1 390 aa21.62■■□□□ 1.05
TSPAN4-206ENST00000397408 TNKS2Q9H2K2 1166 aa21.62■■□□□ 1.05
TSPAN4-206ENST00000397408 ABCA7Q8IZY2 2146 aa21.61■■□□□ 1.05
TSPAN4-206ENST00000397408 A0A0U1RQJ8 604 aa21.61■■□□□ 1.05
TSPAN4-206ENST00000397408 PRR23AA6NEV1 266 aa21.61■■□□□ 1.05
TSPAN4-206ENST00000397408 DFFAO00273 331 aa21.61■■□□□ 1.05
TSPAN4-206ENST00000397408 KRT1P04264 644 aa21.61■■□□□ 1.05
TSPAN4-206ENST00000397408 PSMD8P48556 350 aa21.61■■□□□ 1.05
TSPAN4-206ENST00000397408 PAPOLAP51003 745 aaKnown RBP21.61■■□□□ 1.05
TSPAN4-206ENST00000397408 TPMTP51580 245 aa21.61■■□□□ 1.05
TSPAN4-206ENST00000397408 ZBTB16Q05516 673 aa21.61■■□□□ 1.05
TSPAN4-206ENST00000397408 KIF5AQ12840 1032 aa21.61■■□□□ 1.05
TSPAN4-206ENST00000397408 PLK5Q496M5 336 aa21.61■■□□□ 1.05
TSPAN4-206ENST00000397408 ASCL5Q7RTU5 278 aa21.61■■□□□ 1.05
TSPAN4-206ENST00000397408 LZTR1Q8N653 840 aa21.61■■□□□ 1.05
TSPAN4-206ENST00000397408 CCDC114Q96M63 670 aa21.61■■□□□ 1.05
TSPAN4-206ENST00000397408 FAM129BQ96TA1 746 aa21.61■■□□□ 1.05
TSPAN4-206ENST00000397408 ITM2CQ9NQX7 267 aa21.61■■□□□ 1.05
TSPAN4-206ENST00000397408 TRIM10Q9UDY6 481 aa21.61■■□□□ 1.05
TSPAN4-206ENST00000397408 MBD1Q9UIS9 605 aaPredicted RBP21.61■■□□□ 1.05
TSPAN4-206ENST00000397408 C7P10643 843 aa21.6■■□□□ 1.05
TSPAN4-206ENST00000397408 KDELR1P24390 212 aa21.6■■□□□ 1.05
TSPAN4-206ENST00000397408 ELF2Q15723 593 aa21.6■■□□□ 1.05
TSPAN4-206ENST00000397408 CST6Q15828 149 aa21.6■■□□□ 1.05
TSPAN4-206ENST00000397408 OTOGLQ3ZCN5 2332 aa21.6■■□□□ 1.05
TSPAN4-206ENST00000397408 TTC31Q49AM3 519 aaPredicted RBP21.6■■□□□ 1.05
TSPAN4-206ENST00000397408 ANKRD20A8PQ5CZ79 823 aa21.6■■□□□ 1.05
TSPAN4-206ENST00000397408 TP53INP2Q8IXH6 220 aa21.6■■□□□ 1.05
TSPAN4-206ENST00000397408 PCDH20Q8N6Y1 951 aaKnown RBP21.6■■□□□ 1.05
TSPAN4-206ENST00000397408 OR2A12Q8NGT7 310 aa21.6■■□□□ 1.05
TSPAN4-206ENST00000397408 PCDH19Q8TAB3 1148 aa21.6■■□□□ 1.05
TSPAN4-206ENST00000397408 FAF2Q96CS3 445 aa21.6■■□□□ 1.05
TSPAN4-206ENST00000397408 CALR3Q96L12 384 aaKnown RBP21.6■■□□□ 1.05
TSPAN4-206ENST00000397408 DUSP15Q9H1R2 295 aaPredicted RBP21.6■■□□□ 1.05
TSPAN4-206ENST00000397408 ADGRG1Q9Y653 693 aa21.6■■□□□ 1.05
TSPAN4-206ENST00000397408 PIEZO1Q92508 2521 aa21.59■■□□□ 1.05
TSPAN4-206ENST00000397408 MACROD2A1Z1Q3 448 aa21.59■■□□□ 1.05
TSPAN4-206ENST00000397408 ALOX15BO15296 676 aa21.59■■□□□ 1.05
TSPAN4-206ENST00000397408 MID1O15344 667 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms