RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 MED15Q96RN5 788 aa9.02□□□□□ -0.97
CAPN3-208ENST00000397204 THAP9Q9H5L6 903 aa9.02□□□□□ -0.97
CAPN3-208ENST00000397204 TMPRSS4Q9NRS4 437 aa9.02□□□□□ -0.97
CAPN3-208ENST00000397204 CYTH4Q9UIA0 394 aa9.02□□□□□ -0.97
CAPN3-208ENST00000397204 PPM1HQ9ULR3 514 aa9.02□□□□□ -0.97
CAPN3-208ENST00000397204 CNTN6Q9UQ52 1028 aa9.02□□□□□ -0.97
CAPN3-208ENST00000397204 SPTA1P02549 2419 aa9.02□□□□□ -0.97
CAPN3-208ENST00000397204 MAST4O15021 2626 aa9.01□□□□□ -0.97
CAPN3-208ENST00000397204 CAPN8A6NHC0 703 aa9.01□□□□□ -0.97
CAPN3-208ENST00000397204 F5H5T6 163 aa9.01□□□□□ -0.97
CAPN3-208ENST00000397204 PRAMEF26H0Y7S4 382 aa9.01□□□□□ -0.97
CAPN3-208ENST00000397204 PSMA7O14818 248 aa9.01□□□□□ -0.97
CAPN3-208ENST00000397204 MCF2LO15068 1137 aa9.01□□□□□ -0.97
CAPN3-208ENST00000397204 ALOX15BO15296 676 aa9.01□□□□□ -0.97
CAPN3-208ENST00000397204 PLRG1O43660 514 aaKnown RBP9.01□□□□□ -0.97
CAPN3-208ENST00000397204 ATP9BO43861 1147 aa9.01□□□□□ -0.97
CAPN3-208ENST00000397204 RTN2O75298 545 aa9.01□□□□□ -0.97
CAPN3-208ENST00000397204 TRUB2O95900 331 aaKnown RBP9.01□□□□□ -0.97
CAPN3-208ENST00000397204 IGLV3-25P01717 112 aa9.01□□□□□ -0.97
CAPN3-208ENST00000397204 GLDCP23378 1020 aa9.01□□□□□ -0.97
CAPN3-208ENST00000397204 PPP1R2P41236 205 aa9.01□□□□□ -0.97
CAPN3-208ENST00000397204 CLDN6P56747 220 aa9.01□□□□□ -0.97
CAPN3-208ENST00000397204 CCDC15Q0P6D6 951 aa9.01□□□□□ -0.97
CAPN3-208ENST00000397204 MTA1Q13330 715 aa9.01□□□□□ -0.97
CAPN3-208ENST00000397204 ZNF211Q13398 564 aaPredicted RBP9.01□□□□□ -0.97
CAPN3-208ENST00000397204 EIF4EBP2Q13542 120 aaPredicted RBP9.01□□□□□ -0.97
CAPN3-208ENST00000397204 STIM1Q13586 685 aa9.01□□□□□ -0.97
CAPN3-208ENST00000397204 RABGAP1LQ5R372 815 aa9.01□□□□□ -0.97
CAPN3-208ENST00000397204 TTC39BQ5VTQ0 682 aaPredicted RBP9.01□□□□□ -0.97
CAPN3-208ENST00000397204 NEK5Q6P3R8 708 aa9.01□□□□□ -0.97
CAPN3-208ENST00000397204 RRAGAQ7L523 313 aa9.01□□□□□ -0.97
CAPN3-208ENST00000397204 GPR155Q7Z3F1 870 aa9.01□□□□□ -0.97
CAPN3-208ENST00000397204 TAC4Q86UU9 113 aa9.01□□□□□ -0.97
CAPN3-208ENST00000397204 TRIM69Q86WT6 500 aa9.01□□□□□ -0.97
CAPN3-208ENST00000397204 CHSY1Q86X52 802 aa9.01□□□□□ -0.97
CAPN3-208ENST00000397204 FMR1NBQ8N0W7 255 aaPredicted RBP9.01□□□□□ -0.97
CAPN3-208ENST00000397204 CCAR2Q8N163 923 aaKnown RBP9.01□□□□□ -0.97
CAPN3-208ENST00000397204 DCBLD1Q8N8Z6 715 aa9.01□□□□□ -0.97
CAPN3-208ENST00000397204 OR8D1Q8WZ84 308 aa9.01□□□□□ -0.97
CAPN3-208ENST00000397204 ERCC4Q92889 916 aaPredicted RBP9.01□□□□□ -0.97
CAPN3-208ENST00000397204 KAT5Q92993 513 aa9.01□□□□□ -0.97
CAPN3-208ENST00000397204 SMARCE1Q969G3 411 aa9.01□□□□□ -0.97
CAPN3-208ENST00000397204 KLHDC7BQ96G42 594 aa9.01□□□□□ -0.97
CAPN3-208ENST00000397204 PRMT1Q99873 361 aaKnown RBP9.01□□□□□ -0.97
CAPN3-208ENST00000397204 POPDC2Q9HBU9 364 aa9.01□□□□□ -0.97
CAPN3-208ENST00000397204 KLHL11Q9NVR0 708 aa9.01□□□□□ -0.97
CAPN3-208ENST00000397204 XPO7Q9UIA9 1087 aaKnown RBP9.01□□□□□ -0.97
CAPN3-208ENST00000397204 HOOK1Q9UJC3 728 aaKnown RBP9.01□□□□□ -0.97
CAPN3-208ENST00000397204 CLCA2Q9UQC9 943 aa9.01□□□□□ -0.97
CAPN3-208ENST00000397204 RAI2Q9Y5P3 530 aa9.01□□□□□ -0.97
CAPN3-208ENST00000397204 COL5A1P20908 1838 aaPredicted RBP9.01□□□□□ -0.97
CAPN3-208ENST00000397204 PIEZO2Q9H5I5 2752 aa9□□□□□ -0.97
CAPN3-208ENST00000397204 TEX51A0A1B0GUA7 166 aa9□□□□□ -0.97
CAPN3-208ENST00000397204 A0A1B0GVM2 712 aa9□□□□□ -0.97
CAPN3-208ENST00000397204 TCAF2A6NFQ2 919 aa9□□□□□ -0.97
CAPN3-208ENST00000397204 ESPNB1AK53 854 aa9□□□□□ -0.97
CAPN3-208ENST00000397204 C1QTNF3-AMACRE9PGA6 284 aa9□□□□□ -0.97
CAPN3-208ENST00000397204 MED7O43513 233 aa9□□□□□ -0.97
CAPN3-208ENST00000397204 SIGLEC6O43699 453 aa9□□□□□ -0.97
CAPN3-208ENST00000397204 GLI1P08151 1106 aa9□□□□□ -0.97
CAPN3-208ENST00000397204 BMP2P12643 396 aa9□□□□□ -0.97
CAPN3-208ENST00000397204 PDGFRAP16234 1089 aa9□□□□□ -0.97
CAPN3-208ENST00000397204 CCR1P32246 355 aa9□□□□□ -0.97
CAPN3-208ENST00000397204 STK19P49842 368 aaPredicted RBP9□□□□□ -0.97
CAPN3-208ENST00000397204 PPP2CBP62714 309 aa9□□□□□ -0.97
CAPN3-208ENST00000397204 PPP2CAP67775 309 aa9□□□□□ -0.97
CAPN3-208ENST00000397204 CDK17Q00537 523 aa9□□□□□ -0.97
CAPN3-208ENST00000397204 INSM1Q01101 510 aaPredicted RBP9□□□□□ -0.97
CAPN3-208ENST00000397204 CNTN1Q12860 1018 aa9□□□□□ -0.97
CAPN3-208ENST00000397204 DLG2Q15700 870 aa9□□□□□ -0.97
CAPN3-208ENST00000397204 ACCSLQ4AC99 568 aa9□□□□□ -0.97
CAPN3-208ENST00000397204 CCDC40Q4G0X9 1142 aa9□□□□□ -0.97
CAPN3-208ENST00000397204 SETMARQ53H47 684 aaPredicted RBP9□□□□□ -0.97
CAPN3-208ENST00000397204 HS1BP3Q53T59 392 aa9□□□□□ -0.97
CAPN3-208ENST00000397204 FOXR2Q6PJQ5 311 aa9□□□□□ -0.97
CAPN3-208ENST00000397204 LSMEM2Q8N112 164 aa9□□□□□ -0.97
CAPN3-208ENST00000397204 SLC25A45Q8N413 288 aa9□□□□□ -0.97
CAPN3-208ENST00000397204 ZNF606Q8WXB4 792 aa9□□□□□ -0.97
CAPN3-208ENST00000397204 ALG14Q96F25 216 aa9□□□□□ -0.97
CAPN3-208ENST00000397204 FCRL3Q96P31 734 aaPredicted RBP9□□□□□ -0.97
CAPN3-208ENST00000397204 FEM1AQ9BSK4 669 aa9□□□□□ -0.97
CAPN3-208ENST00000397204 PREBQ9HCU5 417 aa9□□□□□ -0.97
CAPN3-208ENST00000397204 SLC25A13Q9UJS0 675 aa9□□□□□ -0.97
CAPN3-208ENST00000397204 SARDHQ9UL12 918 aa9□□□□□ -0.97
CAPN3-208ENST00000397204 MYO18BQ8IUG5 2567 aa8.99□□□□□ -0.97
CAPN3-208ENST00000397204 TENM4Q6N022 2769 aa8.99□□□□□ -0.97
CAPN3-208ENST00000397204 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.99□□□□□ -0.97
CAPN3-208ENST00000397204 TRIM49BA6NDI0 452 aa8.99□□□□□ -0.97
CAPN3-208ENST00000397204 GOLGA6L4A6NEF3 574 aa8.99□□□□□ -0.97
CAPN3-208ENST00000397204 ERVH48-1M5A8F1 160 aa8.99□□□□□ -0.97
CAPN3-208ENST00000397204 TRIM38O00635 465 aa8.99□□□□□ -0.97
CAPN3-208ENST00000397204 BRINP1O60477 761 aa8.99□□□□□ -0.97
CAPN3-208ENST00000397204 CLDN11O75508 207 aa8.99□□□□□ -0.97
CAPN3-208ENST00000397204 GNA14O95837 355 aa8.99□□□□□ -0.97
CAPN3-208ENST00000397204 MT-CO3P00414 261 aa8.99□□□□□ -0.97
CAPN3-208ENST00000397204 CALCAP01258 141 aa8.99□□□□□ -0.97
CAPN3-208ENST00000397204 PRB1P04280 392 aa8.99□□□□□ -0.97
CAPN3-208ENST00000397204 VAV1P15498 845 aa8.99□□□□□ -0.97
CAPN3-208ENST00000397204 ZNF18P17022 549 aa8.99□□□□□ -0.97
CAPN3-208ENST00000397204 DGKAP23743 735 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms