RNA–Protein interactions for RNA: ENST00000397017.6

MCF2L-205, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 3,903 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-205ENST00000397017 RABGEF1Q9UJ41 708 aa15.47■□□□□ 0.07
MCF2L-205ENST00000397017 HAO1Q9UJM8 370 aa15.47■□□□□ 0.07
MCF2L-205ENST00000397017 MTMR11A4FU01 709 aa15.47■□□□□ 0.07
MCF2L-205ENST00000397017 EIF4E1BA6NMX2 242 aaKnown RBP15.47■□□□□ 0.07
MCF2L-205ENST00000397017 DGKIO75912 1065 aa15.47■□□□□ 0.07
MCF2L-205ENST00000397017 HOXD8P13378 290 aaPredicted RBP15.47■□□□□ 0.07
MCF2L-205ENST00000397017 ABL2P42684 1182 aa15.47■□□□□ 0.07
MCF2L-205ENST00000397017 MTDHQ86UE4 582 aaKnown RBP15.47■□□□□ 0.07
MCF2L-205ENST00000397017 REM2Q8IYK8 340 aaPredicted RBP15.47■□□□□ 0.07
MCF2L-205ENST00000397017 CNPY4Q8N129 248 aa15.47■□□□□ 0.07
MCF2L-205ENST00000397017 LZTR1Q8N653 840 aa15.47■□□□□ 0.07
MCF2L-205ENST00000397017 CDC26Q8NHZ8 85 aa15.47■□□□□ 0.07
MCF2L-205ENST00000397017 MAGEB18Q96M61 343 aa15.47■□□□□ 0.07
MCF2L-205ENST00000397017 NAT9Q9BTE0 207 aa15.47■□□□□ 0.07
MCF2L-205ENST00000397017 SMG9Q9H0W8 520 aaKnown RBP15.47■□□□□ 0.07
MCF2L-205ENST00000397017 UBA2Q9UBT2 640 aaPredicted RBP15.47■□□□□ 0.07
MCF2L-205ENST00000397017 CTPS1P17812 591 aa15.46■□□□□ 0.07
MCF2L-205ENST00000397017 PDCD2Q16342 344 aaPredicted RBP15.46■□□□□ 0.07
MCF2L-205ENST00000397017 FBXL22Q6P050 247 aa15.46■□□□□ 0.07
MCF2L-205ENST00000397017 RHBDF2Q6PJF5 856 aa15.46■□□□□ 0.07
MCF2L-205ENST00000397017 AFAP1L2Q8N4X5 818 aa15.46■□□□□ 0.07
MCF2L-205ENST00000397017 RPL10LQ96L21 214 aaKnown RBP15.46■□□□□ 0.07
MCF2L-205ENST00000397017 EGFL8Q99944 293 aa15.46■□□□□ 0.07
MCF2L-205ENST00000397017 PFDN4Q9NQP4 134 aa15.46■□□□□ 0.07
MCF2L-205ENST00000397017 LATS2Q9NRM7 1088 aa15.46■□□□□ 0.07
MCF2L-205ENST00000397017 PCDHGC4Q9Y5F7 938 aa15.46■□□□□ 0.07
MCF2L-205ENST00000397017 SLC38A8A6NNN8 435 aa15.46■□□□□ 0.07
MCF2L-205ENST00000397017 SYN3O14994 580 aa15.46■□□□□ 0.07
MCF2L-205ENST00000397017 DCTN3O75935 186 aa15.46■□□□□ 0.07
MCF2L-205ENST00000397017 TSPAN8P19075 237 aa15.46■□□□□ 0.07
MCF2L-205ENST00000397017 PPM1LQ5SGD2 360 aa15.46■□□□□ 0.07
MCF2L-205ENST00000397017 DRICH1Q6PGQ1 229 aaPredicted RBP15.46■□□□□ 0.07
MCF2L-205ENST00000397017 KCTD13Q8WZ19 329 aa15.46■□□□□ 0.07
MCF2L-205ENST00000397017 MTIF3Q9H2K0 278 aaKnown RBP15.46■□□□□ 0.07
MCF2L-205ENST00000397017 HS3ST4Q9Y661 456 aa15.46■□□□□ 0.07
MCF2L-205ENST00000397017 GABBR2O75899 941 aa15.46■□□□□ 0.06
MCF2L-205ENST00000397017 RPSAP08865 295 aaKnown RBP15.46■□□□□ 0.06
MCF2L-205ENST00000397017 ACVRL1P37023 503 aa15.46■□□□□ 0.06
MCF2L-205ENST00000397017 OCRLQ01968 901 aa15.46■□□□□ 0.06
MCF2L-205ENST00000397017 SLC10A7Q0GE19 358 aa15.46■□□□□ 0.06
MCF2L-205ENST00000397017 ZBTB17Q13105 803 aa15.46■□□□□ 0.06
MCF2L-205ENST00000397017 XRCC4Q13426 336 aa15.46■□□□□ 0.06
MCF2L-205ENST00000397017 SKIV2LQ15477 1246 aaKnown RBP15.46■□□□□ 0.06
MCF2L-205ENST00000397017 ALFQ53S48 1182 aa15.46■□□□□ 0.06
MCF2L-205ENST00000397017 NLRP9Q7RTR0 991 aa15.46■□□□□ 0.06
MCF2L-205ENST00000397017 NPWQ8N729 165 aa15.46■□□□□ 0.06
MCF2L-205ENST00000397017 KLHDC9Q8NEP7 349 aa15.46■□□□□ 0.06
MCF2L-205ENST00000397017 KCNV2Q8TDN2 545 aa15.46■□□□□ 0.06
MCF2L-205ENST00000397017 USP29Q9HBJ7 922 aa15.46■□□□□ 0.06
MCF2L-205ENST00000397017 GLOD4Q9HC38 313 aa15.46■□□□□ 0.06
MCF2L-205ENST00000397017 DNAJC16Q9Y2G8 782 aa15.46■□□□□ 0.06
MCF2L-205ENST00000397017 ZFP37Q9Y6Q3 630 aaPredicted RBP15.46■□□□□ 0.06
MCF2L-205ENST00000397017 RHOBTB1O94844 696 aa15.45■□□□□ 0.06
MCF2L-205ENST00000397017 GJB5O95377 273 aa15.45■□□□□ 0.06
MCF2L-205ENST00000397017 C1RP00736 705 aa15.45■□□□□ 0.06
MCF2L-205ENST00000397017 CLTBP09497 229 aa15.45■□□□□ 0.06
MCF2L-205ENST00000397017 AQP5P55064 265 aa15.45■□□□□ 0.06
MCF2L-205ENST00000397017 UGP2Q16851 508 aa15.45■□□□□ 0.06
MCF2L-205ENST00000397017 BRMS1LQ5PSV4 323 aa15.45■□□□□ 0.06
MCF2L-205ENST00000397017 RAB44Q7Z6P3 723 aaPredicted RBP15.45■□□□□ 0.06
MCF2L-205ENST00000397017 BTN2A3PQ96KV6 586 aa15.45■□□□□ 0.06
MCF2L-205ENST00000397017 GPAMQ9HCL2 828 aa15.45■□□□□ 0.06
MCF2L-205ENST00000397017 USH1CQ9Y6N9 552 aa15.45■□□□□ 0.06
MCF2L-205ENST00000397017 CLUHO75153 1309 aa15.45■□□□□ 0.06
MCF2L-205ENST00000397017 SCN1AP35498 2009 aa15.45■□□□□ 0.06
MCF2L-205ENST00000397017 DNM1LO00429 736 aa15.45■□□□□ 0.06
MCF2L-205ENST00000397017 ADAM12O43184 909 aa15.45■□□□□ 0.06
MCF2L-205ENST00000397017 STMN1P16949 149 aa15.45■□□□□ 0.06
MCF2L-205ENST00000397017 IL4RP24394 825 aa15.45■□□□□ 0.06
MCF2L-205ENST00000397017 LBX1P52954 281 aa15.45■□□□□ 0.06
MCF2L-205ENST00000397017 FBXO48Q5FWF7 155 aa15.45■□□□□ 0.06
MCF2L-205ENST00000397017 NEPROQ6NW34 567 aa15.45■□□□□ 0.06
MCF2L-205ENST00000397017 FRA10AC1Q70Z53 315 aa15.45■□□□□ 0.06
MCF2L-205ENST00000397017 SLC41A1Q8IVJ1 513 aa15.45■□□□□ 0.06
MCF2L-205ENST00000397017 ZNF358Q9NW07 568 aa15.45■□□□□ 0.06
MCF2L-205ENST00000397017 A0A1W2PRU2 124 aa15.45■□□□□ 0.06
MCF2L-205ENST00000397017 ERI2A8K979 691 aaKnown RBP15.45■□□□□ 0.06
MCF2L-205ENST00000397017 GABRDO14764 452 aa15.45■□□□□ 0.06
MCF2L-205ENST00000397017 PER2O15055 1255 aa15.45■□□□□ 0.06
MCF2L-205ENST00000397017 FGF10O15520 208 aaPredicted RBP15.45■□□□□ 0.06
MCF2L-205ENST00000397017 PSMD3O43242 534 aa15.45■□□□□ 0.06
MCF2L-205ENST00000397017 NMBRP28336 390 aa15.45■□□□□ 0.06
MCF2L-205ENST00000397017 MBTPS1Q14703 1052 aa15.45■□□□□ 0.06
MCF2L-205ENST00000397017 CBX2Q14781 532 aaPredicted RBP15.45■□□□□ 0.06
MCF2L-205ENST00000397017 TRIM68Q6AZZ1 485 aa15.45■□□□□ 0.06
MCF2L-205ENST00000397017 ESRP1Q6NXG1 681 aaKnown RBP15.45■□□□□ 0.06
MCF2L-205ENST00000397017 GRIN3AQ8TCU5 1115 aa15.45■□□□□ 0.06
MCF2L-205ENST00000397017 KHSRPQ92945 711 aaKnown RBP eCLIP15.45■□□□□ 0.06
MCF2L-205ENST00000397017 TMEM237Q96Q45 408 aa15.45■□□□□ 0.06
MCF2L-205ENST00000397017 TACR2P21452 398 aa15.44■□□□□ 0.06
MCF2L-205ENST00000397017 AKT1P31749 480 aa15.44■□□□□ 0.06
MCF2L-205ENST00000397017 IRF5Q13568 498 aa15.44■□□□□ 0.06
MCF2L-205ENST00000397017 ZNF460Q14592 562 aa15.44■□□□□ 0.06
MCF2L-205ENST00000397017 SLC9A4Q6AI14 798 aa15.44■□□□□ 0.06
MCF2L-205ENST00000397017 DDIASQ8IXT1 998 aa15.44■□□□□ 0.06
MCF2L-205ENST00000397017 COLGALT2Q8IYK4 626 aa15.44■□□□□ 0.06
MCF2L-205ENST00000397017 HDAC10Q969S8 669 aa15.44■□□□□ 0.06
MCF2L-205ENST00000397017 APOPT1Q96IL0 206 aa15.44■□□□□ 0.06
MCF2L-205ENST00000397017 SERAC1Q96JX3 654 aa15.44■□□□□ 0.06
MCF2L-205ENST00000397017 POLR1EQ9GZS1 481 aaKnown RBP15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms