RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 USP2O75604 605 aaPredicted RBP10.01□□□□□ -0.81
TRIM39-203ENST00000396547 MCF2P10911 925 aa10.01□□□□□ -0.81
TRIM39-203ENST00000396547 HNRNPLP14866 589 aaKnown RBP eCLIP10.01□□□□□ -0.81
TRIM39-203ENST00000396547 CNTFP26441 200 aa10.01□□□□□ -0.81
TRIM39-203ENST00000396547 ARL2P36404 184 aa10.01□□□□□ -0.81
TRIM39-203ENST00000396547 RPL14P50914 215 aaKnown RBP10.01□□□□□ -0.81
TRIM39-203ENST00000396547 NOGQ13253 232 aa10.01□□□□□ -0.81
TRIM39-203ENST00000396547 ITGA7Q13683 1181 aa10.01□□□□□ -0.81
TRIM39-203ENST00000396547 IKBKEQ14164 716 aa10.01□□□□□ -0.81
TRIM39-203ENST00000396547 CYGBQ8WWM9 190 aa10.01□□□□□ -0.81
TRIM39-203ENST00000396547 APBB2Q92870 758 aa10.01□□□□□ -0.81
TRIM39-203ENST00000396547 GPRASP2Q96D09 838 aa10.01□□□□□ -0.81
TRIM39-203ENST00000396547 TSNARE1Q96NA8 513 aa10.01□□□□□ -0.81
TRIM39-203ENST00000396547 OSBPL6Q9BZF3 934 aa10.01□□□□□ -0.81
TRIM39-203ENST00000396547 TLK1Q9UKI8 766 aa10.01□□□□□ -0.81
TRIM39-203ENST00000396547 PRPF19Q9UMS4 504 aaKnown RBP10.01□□□□□ -0.81
TRIM39-203ENST00000396547 RUVBL2Q9Y230 463 aaKnown RBP10.01□□□□□ -0.81
TRIM39-203ENST00000396547 RNF103-CHMP3A0A140T963 221 aa10□□□□□ -0.81
TRIM39-203ENST00000396547 C9JVG2 144 aa10□□□□□ -0.81
TRIM39-203ENST00000396547 RNF103O00237 685 aa10□□□□□ -0.81
TRIM39-203ENST00000396547 HDAC3O15379 428 aa10□□□□□ -0.81
TRIM39-203ENST00000396547 POLBP06746 335 aa10□□□□□ -0.81
TRIM39-203ENST00000396547 ZNF26P17031 533 aaPredicted RBP10□□□□□ -0.81
TRIM39-203ENST00000396547 CYP3A5P20815 502 aa10□□□□□ -0.81
TRIM39-203ENST00000396547 YAP1P46937 504 aaKnown RBP10□□□□□ -0.81
TRIM39-203ENST00000396547 RXRGP48443 463 aa10□□□□□ -0.81
TRIM39-203ENST00000396547 VEGFBP49765 207 aa10□□□□□ -0.81
TRIM39-203ENST00000396547 CDK9P50750 372 aaKnown RBP10□□□□□ -0.81
TRIM39-203ENST00000396547 MCCD1P59942 119 aaPredicted RBP10□□□□□ -0.81
TRIM39-203ENST00000396547 PSME3P61289 254 aa10□□□□□ -0.81
TRIM39-203ENST00000396547 CNTN2Q02246 1040 aa10□□□□□ -0.81
TRIM39-203ENST00000396547 IFRD2Q12894 506 aaPredicted RBP10□□□□□ -0.81
TRIM39-203ENST00000396547 PDK2Q15119 407 aa10□□□□□ -0.81
TRIM39-203ENST00000396547 NEDD8Q15843 81 aa10□□□□□ -0.81
TRIM39-203ENST00000396547 LRRC43Q8N309 656 aa10□□□□□ -0.81
TRIM39-203ENST00000396547 C1orf127Q8N9H9 656 aa10□□□□□ -0.81
TRIM39-203ENST00000396547 TMEM102Q8N9M5 508 aaPredicted RBP10□□□□□ -0.81
TRIM39-203ENST00000396547 RP9Q8TA86 221 aaKnown RBP10□□□□□ -0.81
TRIM39-203ENST00000396547 URGCPQ8TCY9 931 aa10□□□□□ -0.81
TRIM39-203ENST00000396547 ACMSDQ8TDX5 336 aa10□□□□□ -0.81
TRIM39-203ENST00000396547 C12orf43Q96C57 262 aaKnown RBP10□□□□□ -0.81
TRIM39-203ENST00000396547 CERS2Q96G23 380 aa10□□□□□ -0.81
TRIM39-203ENST00000396547 CYP4F12Q9HCS2 524 aa10□□□□□ -0.81
TRIM39-203ENST00000396547 TRPC7Q9HCX4 862 aa10□□□□□ -0.81
TRIM39-203ENST00000396547 SIX4Q9UIU6 781 aa10□□□□□ -0.81
TRIM39-203ENST00000396547 AP4E1Q9UPM8 1137 aa10□□□□□ -0.81
TRIM39-203ENST00000396547 SNX9Q9Y5X1 595 aa10□□□□□ -0.81
TRIM39-203ENST00000396547 A0A1W2PPW3 197 aa10□□□□□ -0.81
TRIM39-203ENST00000396547 G3V2L1 256 aa10□□□□□ -0.81
TRIM39-203ENST00000396547 FAM189A1O60320 539 aa10□□□□□ -0.81
TRIM39-203ENST00000396547 ZNF23P17027 643 aa10□□□□□ -0.81
TRIM39-203ENST00000396547 GLDCP23378 1020 aa10□□□□□ -0.81
TRIM39-203ENST00000396547 SPRP35270 261 aaPredicted RBP10□□□□□ -0.81
TRIM39-203ENST00000396547 PPARGP37231 505 aaPredicted RBP10□□□□□ -0.81
TRIM39-203ENST00000396547 NIPAL4Q0D2K0 466 aa10□□□□□ -0.81
TRIM39-203ENST00000396547 PRPSAP1Q14558 356 aa10□□□□□ -0.81
TRIM39-203ENST00000396547 AGKQ53H12 422 aa10□□□□□ -0.81
TRIM39-203ENST00000396547 PRAMEF18Q5VWM3 479 aa10□□□□□ -0.81
TRIM39-203ENST00000396547 OFCC1Q8IZS5 231 aa10□□□□□ -0.81
TRIM39-203ENST00000396547 KCTD4Q8WVF5 259 aa10□□□□□ -0.81
TRIM39-203ENST00000396547 FAM149B1Q96BN6 582 aa10□□□□□ -0.81
TRIM39-203ENST00000396547 YIPF2Q9BWQ6 316 aa10□□□□□ -0.81
TRIM39-203ENST00000396547 ACE2Q9BYF1 805 aaPredicted RBP10□□□□□ -0.81
TRIM39-203ENST00000396547 SOX17Q9H6I2 414 aaPredicted RBP10□□□□□ -0.81
TRIM39-203ENST00000396547 DTLQ9NZJ0 730 aa10□□□□□ -0.81
TRIM39-203ENST00000396547 KLHL8Q9P2G9 620 aaPredicted RBP10□□□□□ -0.81
TRIM39-203ENST00000396547 V9GYQ6 96 aa10□□□□□ -0.81
TRIM39-203ENST00000396547 A0A0G2JMZ2 1700 aa10□□□□□ -0.81
TRIM39-203ENST00000396547 LACTBL1A8MY62 500 aa10□□□□□ -0.81
TRIM39-203ENST00000396547 WDR46O15213 610 aaKnown RBP10□□□□□ -0.81
TRIM39-203ENST00000396547 HCRTO43612 131 aa10□□□□□ -0.81
TRIM39-203ENST00000396547 ENDOD1O94919 500 aa10□□□□□ -0.81
TRIM39-203ENST00000396547 ZBTB11O95625 1053 aaPredicted RBP10□□□□□ -0.81
TRIM39-203ENST00000396547 OCM2P0CE71 109 aa10□□□□□ -0.81
TRIM39-203ENST00000396547 OCMP0CE72 109 aaPredicted RBP10□□□□□ -0.81
TRIM39-203ENST00000396547 COL6A2P12110 1019 aa10□□□□□ -0.81
TRIM39-203ENST00000396547 TSPAN8P19075 237 aa10□□□□□ -0.81
TRIM39-203ENST00000396547 ABCD1P33897 745 aa10□□□□□ -0.81
TRIM39-203ENST00000396547 SULT2A1Q06520 285 aa10□□□□□ -0.81
TRIM39-203ENST00000396547 BNIP3Q12983 259 aa10□□□□□ -0.81
TRIM39-203ENST00000396547 USP10Q14694 798 aaKnown RBP10□□□□□ -0.81
TRIM39-203ENST00000396547 MAP7D1Q3KQU3 841 aa10□□□□□ -0.81
TRIM39-203ENST00000396547 CERCAMQ5T4B2 595 aa10□□□□□ -0.81
TRIM39-203ENST00000396547 JADE1Q6IE81 842 aa10□□□□□ -0.81
TRIM39-203ENST00000396547 KDELC2Q7Z4H8 507 aa10□□□□□ -0.81
TRIM39-203ENST00000396547 ZBTB8OSQ8IWT0 167 aa10□□□□□ -0.81
TRIM39-203ENST00000396547 PGAM4Q8N0Y7 254 aa10□□□□□ -0.81
TRIM39-203ENST00000396547 BBS5Q8N3I7 341 aa10□□□□□ -0.81
TRIM39-203ENST00000396547 CCDC185Q8N715 623 aa10□□□□□ -0.81
TRIM39-203ENST00000396547 RDM1Q8NG50 284 aa10□□□□□ -0.81
TRIM39-203ENST00000396547 ARNTL2Q8WYA1 636 aa10□□□□□ -0.81
TRIM39-203ENST00000396547 NAA50Q9GZZ1 169 aaKnown RBP10□□□□□ -0.81
TRIM39-203ENST00000396547 TBC1D23Q9NUY8 699 aa10□□□□□ -0.81
TRIM39-203ENST00000396547 OLAHQ9NV23 265 aa10□□□□□ -0.81
TRIM39-203ENST00000396547 COPG1Q9Y678 874 aaKnown RBP10□□□□□ -0.81
TRIM39-203ENST00000396547 PRSS51A0A1B0GVH4 220 aa9.99□□□□□ -0.81
TRIM39-203ENST00000396547 ATP6AP2A0A1C7CYW4 349 aa9.99□□□□□ -0.81
TRIM39-203ENST00000396547 BTBD19C9JJ37 291 aa9.99□□□□□ -0.81
TRIM39-203ENST00000396547 VWA5AO00534 786 aa9.99□□□□□ -0.81
TRIM39-203ENST00000396547 MSCO60682 206 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms