RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 VPS45Q9NRW7 570 aa16.43■□□□□ 0.22
SNX6-202ENST00000396526 TMEM248Q9NWD8 314 aa16.43■□□□□ 0.22
SNX6-202ENST00000396526 MYCP01106 439 aaPredicted RBP16.42■□□□□ 0.22
SNX6-202ENST00000396526 VEGFBP49765 207 aa16.42■□□□□ 0.22
SNX6-202ENST00000396526 GATMP50440 423 aa16.42■□□□□ 0.22
SNX6-202ENST00000396526 CCDC153Q494R4 210 aa16.42■□□□□ 0.22
SNX6-202ENST00000396526 MS4A13Q5J8X5 152 aa16.42■□□□□ 0.22
SNX6-202ENST00000396526 N4BP2L1Q5TBK1 243 aaPredicted RBP16.42■□□□□ 0.22
SNX6-202ENST00000396526 PIK3R6Q5UE93 754 aa16.42■□□□□ 0.22
SNX6-202ENST00000396526 PKN3Q6P5Z2 889 aa16.42■□□□□ 0.22
SNX6-202ENST00000396526 TFAP2DQ7Z6R9 452 aa16.42■□□□□ 0.22
SNX6-202ENST00000396526 PTPRN2Q92932 1015 aa16.42■□□□□ 0.22
SNX6-202ENST00000396526 B3GALT6Q96L58 329 aa16.42■□□□□ 0.22
SNX6-202ENST00000396526 FCRL3Q96P31 734 aaPredicted RBP16.42■□□□□ 0.22
SNX6-202ENST00000396526 BEGAINQ9BUH8 593 aa16.42■□□□□ 0.22
SNX6-202ENST00000396526 SLC25A51Q9H1U9 297 aa16.42■□□□□ 0.22
SNX6-202ENST00000396526 SIRPGQ9P1W8 387 aa16.42■□□□□ 0.22
SNX6-202ENST00000396526 TLR5O60602 858 aa16.42■□□□□ 0.22
SNX6-202ENST00000396526 RAMP2O60895 175 aa16.42■□□□□ 0.22
SNX6-202ENST00000396526 UNC5CO95185 931 aa16.42■□□□□ 0.22
SNX6-202ENST00000396526 HMBSP08397 361 aa16.42■□□□□ 0.22
SNX6-202ENST00000396526 YBEYP58557 167 aaPredicted RBP16.42■□□□□ 0.22
SNX6-202ENST00000396526 OLIG2Q13516 323 aa16.42■□□□□ 0.22
SNX6-202ENST00000396526 SPOUT1Q5T280 376 aaKnown RBP16.42■□□□□ 0.22
SNX6-202ENST00000396526 ARHGAP36Q6ZRI8 547 aa16.42■□□□□ 0.22
SNX6-202ENST00000396526 PACS2Q86VP3 889 aa16.42■□□□□ 0.22
SNX6-202ENST00000396526 SPATA22Q8NHS9 363 aa16.42■□□□□ 0.22
SNX6-202ENST00000396526 RNF208Q9H0X6 261 aa16.42■□□□□ 0.22
SNX6-202ENST00000396526 MYLK2Q9H1R3 596 aa16.42■□□□□ 0.22
SNX6-202ENST00000396526 IARS2Q9NSE4 1012 aaKnown RBP16.42■□□□□ 0.22
SNX6-202ENST00000396526 THAP1Q9NVV9 213 aa16.42■□□□□ 0.22
SNX6-202ENST00000396526 HBS1LQ9Y450 684 aaKnown RBP16.42■□□□□ 0.22
SNX6-202ENST00000396526 CDY1Q9Y6F8 540 aa16.42■□□□□ 0.22
SNX6-202ENST00000396526 HMX2A2RU54 273 aa16.41■□□□□ 0.22
SNX6-202ENST00000396526 NCALDP61601 193 aa16.41■□□□□ 0.22
SNX6-202ENST00000396526 IRX4P78413 519 aa16.41■□□□□ 0.22
SNX6-202ENST00000396526 BST1Q10588 318 aa16.41■□□□□ 0.22
SNX6-202ENST00000396526 TEDDM1Q5T9Z0 273 aa16.41■□□□□ 0.22
SNX6-202ENST00000396526 CYB5D1Q6P9G0 228 aa16.41■□□□□ 0.22
SNX6-202ENST00000396526 RNF19BQ6ZMZ0 732 aa16.41■□□□□ 0.22
SNX6-202ENST00000396526 WDR75Q8IWA0 830 aaKnown RBP16.41■□□□□ 0.22
SNX6-202ENST00000396526 FBXO22Q8NEZ5 403 aa16.41■□□□□ 0.22
SNX6-202ENST00000396526 PABPC5Q96DU9 382 aaKnown RBP16.41■□□□□ 0.22
SNX6-202ENST00000396526 FAM96AQ9H5X1 160 aa16.41■□□□□ 0.22
SNX6-202ENST00000396526 SAR1AQ9NR31 198 aa16.41■□□□□ 0.22
SNX6-202ENST00000396526 SAGE1Q9NXZ1 904 aa16.41■□□□□ 0.22
SNX6-202ENST00000396526 ZCWPW2A0A1B0GU75 182 aa16.41■□□□□ 0.22
SNX6-202ENST00000396526 RASSF9O75901 435 aa16.41■□□□□ 0.22
SNX6-202ENST00000396526 GRK2P25098 689 aa16.41■□□□□ 0.22
SNX6-202ENST00000396526 CCL23P55773 120 aa16.41■□□□□ 0.22
SNX6-202ENST00000396526 PDE1CQ14123 709 aaPredicted RBP16.41■□□□□ 0.22
SNX6-202ENST00000396526 IKBKEQ14164 716 aa16.41■□□□□ 0.22
SNX6-202ENST00000396526 FASTKD1Q53R41 847 aaKnown RBP16.41■□□□□ 0.22
SNX6-202ENST00000396526 RAP1GAP2Q684P5 730 aa16.41■□□□□ 0.22
SNX6-202ENST00000396526 DCLK2Q8N568 766 aa16.41■□□□□ 0.22
SNX6-202ENST00000396526 FATE1Q969F0 183 aa16.41■□□□□ 0.22
SNX6-202ENST00000396526 ZNF512Q96ME7 567 aaPredicted RBP16.41■□□□□ 0.22
SNX6-202ENST00000396526 NEU3Q9UQ49 428 aa16.41■□□□□ 0.22
SNX6-202ENST00000396526 CHKBQ9Y259 395 aa16.41■□□□□ 0.22
SNX6-202ENST00000396526 UPP2O95045 317 aa16.41■□□□□ 0.22
SNX6-202ENST00000396526 MT-CYBP00156 380 aaPredicted RBP16.41■□□□□ 0.22
SNX6-202ENST00000396526 ALDOAP04075 364 aaKnown RBP16.41■□□□□ 0.22
SNX6-202ENST00000396526 NQO1P15559 274 aaKnown RBP16.41■□□□□ 0.22
SNX6-202ENST00000396526 ATP5C1P36542 298 aaKnown RBP16.41■□□□□ 0.22
SNX6-202ENST00000396526 HARS2P49590 506 aaKnown RBP16.41■□□□□ 0.22
SNX6-202ENST00000396526 ATN1P54259 1190 aaPredicted RBP16.41■□□□□ 0.22
SNX6-202ENST00000396526 POLD3Q15054 466 aaPredicted RBP16.41■□□□□ 0.22
SNX6-202ENST00000396526 PARP15Q460N3 678 aa16.41■□□□□ 0.22
SNX6-202ENST00000396526 TAF1BQ53T94 588 aaPredicted RBP16.41■□□□□ 0.22
SNX6-202ENST00000396526 RTP2Q5QGT7 225 aa16.41■□□□□ 0.22
SNX6-202ENST00000396526 AFMIDQ63HM1 303 aa16.41■□□□□ 0.22
SNX6-202ENST00000396526 TTC9BQ8N6N2 239 aa16.41■□□□□ 0.22
SNX6-202ENST00000396526 GIPC2Q8TF65 315 aa16.41■□□□□ 0.22
SNX6-202ENST00000396526 GORASP1Q9BQQ3 440 aa16.41■□□□□ 0.22
SNX6-202ENST00000396526 WWP1Q9H0M0 922 aa16.41■□□□□ 0.22
SNX6-202ENST00000396526 DNMT3LQ9UJW3 386 aa16.41■□□□□ 0.22
SNX6-202ENST00000396526 PSAT1Q9Y617 370 aa16.41■□□□□ 0.22
SNX6-202ENST00000396526 F5H5T6 163 aa16.4■□□□□ 0.22
SNX6-202ENST00000396526 HNRNPH1P31943 449 aaKnown RBP16.4■□□□□ 0.22
SNX6-202ENST00000396526 SLC11A2P49281 568 aa16.4■□□□□ 0.22
SNX6-202ENST00000396526 SMAD1Q15797 465 aaKnown RBP16.4■□□□□ 0.22
SNX6-202ENST00000396526 RAPH1Q70E73 1250 aa16.4■□□□□ 0.22
SNX6-202ENST00000396526 KLHDC8BQ8IXV7 354 aa16.4■□□□□ 0.22
SNX6-202ENST00000396526 ZSCAN18Q8TBC5 510 aaPredicted RBP16.4■□□□□ 0.22
SNX6-202ENST00000396526 DPF3Q92784 378 aa16.4■□□□□ 0.22
SNX6-202ENST00000396526 SCLYQ96I15 445 aa16.4■□□□□ 0.22
SNX6-202ENST00000396526 NT5MQ9NPB1 228 aa16.4■□□□□ 0.22
SNX6-202ENST00000396526 SNX15Q9NRS6 342 aa16.4■□□□□ 0.22
SNX6-202ENST00000396526 KCNK4Q9NYG8 393 aa16.4■□□□□ 0.22
SNX6-202ENST00000396526 SLC38A8A6NNN8 435 aa16.4■□□□□ 0.22
SNX6-202ENST00000396526 SOAT2O75908 522 aa16.4■□□□□ 0.22
SNX6-202ENST00000396526 HAUS5O94927 633 aa16.4■□□□□ 0.22
SNX6-202ENST00000396526 TBX18O95935 607 aa16.4■□□□□ 0.22
SNX6-202ENST00000396526 HLA-DQB2P05538 268 aa16.4■□□□□ 0.22
SNX6-202ENST00000396526 MAPKAPK2P49137 400 aa16.4■□□□□ 0.22
SNX6-202ENST00000396526 POU6F1Q14863 301 aa16.4■□□□□ 0.22
SNX6-202ENST00000396526 FBXL22Q6P050 247 aa16.4■□□□□ 0.22
SNX6-202ENST00000396526 DEFB128Q7Z7B8 93 aa16.4■□□□□ 0.22
SNX6-202ENST00000396526 SIKE1Q9BRV8 207 aa16.4■□□□□ 0.22
SNX6-202ENST00000396526 PPP1R12CQ9BZL4 782 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms