RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 MAGEA11P43364 429 aa17.08■□□□□ 0.33
NUP50-202ENST00000396096 TUBP50607 506 aa17.08■□□□□ 0.33
NUP50-202ENST00000396096 CCNG1P51959 295 aa17.08■□□□□ 0.33
NUP50-202ENST00000396096 SMAD1Q15797 465 aaKnown RBP17.08■□□□□ 0.33
NUP50-202ENST00000396096 DENND5AQ6IQ26 1287 aa17.08■□□□□ 0.33
NUP50-202ENST00000396096 PKN3Q6P5Z2 889 aa17.08■□□□□ 0.33
NUP50-202ENST00000396096 RINLQ6ZS11 566 aa17.08■□□□□ 0.33
NUP50-202ENST00000396096 SCN4BQ8IWT1 228 aa17.08■□□□□ 0.33
NUP50-202ENST00000396096 CNTN4Q8IWV2 1026 aa17.08■□□□□ 0.33
NUP50-202ENST00000396096 NUP93Q8N1F7 819 aa17.08■□□□□ 0.33
NUP50-202ENST00000396096 ARHGAP18Q8N392 663 aa17.08■□□□□ 0.33
NUP50-202ENST00000396096 ENDOVQ8N8Q3 282 aaKnown RBP17.08■□□□□ 0.33
NUP50-202ENST00000396096 CFAP61Q8NHU2 1237 aa17.08■□□□□ 0.33
NUP50-202ENST00000396096 AZIN2Q96A70 460 aa17.08■□□□□ 0.33
NUP50-202ENST00000396096 VPS39Q96JC1 886 aa17.08■□□□□ 0.33
NUP50-202ENST00000396096 SORT1Q99523 831 aa17.08■□□□□ 0.33
NUP50-202ENST00000396096 GPR22Q99680 433 aa17.08■□□□□ 0.33
NUP50-202ENST00000396096 CCDC106Q9BWC9 280 aa17.08■□□□□ 0.33
NUP50-202ENST00000396096 FBXO44Q9H4M3 255 aa17.08■□□□□ 0.33
NUP50-202ENST00000396096 IARS2Q9NSE4 1012 aaKnown RBP17.08■□□□□ 0.33
NUP50-202ENST00000396096 OSER1Q9NX31 292 aa17.08■□□□□ 0.33
NUP50-202ENST00000396096 RNF186Q9NXI6 227 aa17.08■□□□□ 0.33
NUP50-202ENST00000396096 TAS2R1Q9NYW7 299 aa17.08■□□□□ 0.33
NUP50-202ENST00000396096 IL37Q9NZH6 218 aa17.08■□□□□ 0.33
NUP50-202ENST00000396096 MARCOQ9UEW3 520 aaPredicted RBP17.08■□□□□ 0.33
NUP50-202ENST00000396096 MCM8Q9UJA3 840 aa17.08■□□□□ 0.33
NUP50-202ENST00000396096 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.08■□□□□ 0.33
NUP50-202ENST00000396096 A0A096LPK6 155 aa17.07■□□□□ 0.32
NUP50-202ENST00000396096 SYN3O14994 580 aa17.07■□□□□ 0.32
NUP50-202ENST00000396096 GYG2O15488 501 aa17.07■□□□□ 0.32
NUP50-202ENST00000396096 LYPLA1O75608 230 aaPredicted RBP17.07■□□□□ 0.32
NUP50-202ENST00000396096 ANP32DO95626 131 aa17.07■□□□□ 0.32
NUP50-202ENST00000396096 KITP10721 976 aa17.07■□□□□ 0.32
NUP50-202ENST00000396096 SLC2A3P11169 496 aa17.07■□□□□ 0.32
NUP50-202ENST00000396096 RALBP11234 206 aa17.07■□□□□ 0.32
NUP50-202ENST00000396096 GM2AP17900 193 aa17.07■□□□□ 0.32
NUP50-202ENST00000396096 TUBB3Q13509 450 aa17.07■□□□□ 0.32
NUP50-202ENST00000396096 POTEHQ6S545 545 aa17.07■□□□□ 0.32
NUP50-202ENST00000396096 LCA5Q86VQ0 697 aa17.07■□□□□ 0.32
NUP50-202ENST00000396096 TREML1Q86YW5 311 aa17.07■□□□□ 0.32
NUP50-202ENST00000396096 PLD6Q8N2A8 252 aaKnown RBP17.07■□□□□ 0.32
NUP50-202ENST00000396096 SPATA22Q8NHS9 363 aa17.07■□□□□ 0.32
NUP50-202ENST00000396096 RHOJQ9H4E5 214 aa17.07■□□□□ 0.32
NUP50-202ENST00000396096 DENND2DQ9H6A0 471 aaPredicted RBP17.07■□□□□ 0.32
NUP50-202ENST00000396096 ENTPD7Q9NQZ7 604 aa17.07■□□□□ 0.32
NUP50-202ENST00000396096 TBC1D13Q9NVG8 400 aa17.07■□□□□ 0.32
NUP50-202ENST00000396096 ABI2Q9NYB9 513 aaPredicted RBP17.07■□□□□ 0.32
NUP50-202ENST00000396096 ARMCX1Q9P291 453 aa17.07■□□□□ 0.32
NUP50-202ENST00000396096 ABT1Q9ULW3 272 aaKnown RBP17.07■□□□□ 0.32
NUP50-202ENST00000396096 ANKRD6Q9Y2G4 727 aa17.07■□□□□ 0.32
NUP50-202ENST00000396096 C15orf41Q9Y2V0 281 aa17.07■□□□□ 0.32
NUP50-202ENST00000396096 DOCK4Q8N1I0 1966 aa17.07■□□□□ 0.32
NUP50-202ENST00000396096 VWA8A3KMH1 1905 aa17.07■□□□□ 0.32
NUP50-202ENST00000396096 MYLKQ15746 1914 aa17.07■□□□□ 0.32
NUP50-202ENST00000396096 MOXD2PA6NHM9 499 aa17.07■□□□□ 0.32
NUP50-202ENST00000396096 C2P06681 752 aa17.07■□□□□ 0.32
NUP50-202ENST00000396096 COL6A1P12109 1028 aa17.07■□□□□ 0.32
NUP50-202ENST00000396096 DNAJB1P25685 340 aa17.07■□□□□ 0.32
NUP50-202ENST00000396096 POLD2P49005 469 aa17.07■□□□□ 0.32
NUP50-202ENST00000396096 ABCE1P61221 599 aaKnown RBP17.07■□□□□ 0.32
NUP50-202ENST00000396096 ANO4Q32M45 955 aa17.07■□□□□ 0.32
NUP50-202ENST00000396096 C14orf80Q86SX3 495 aa17.07■□□□□ 0.32
NUP50-202ENST00000396096 ZC3HC1Q86WB0 502 aaKnown RBP17.07■□□□□ 0.32
NUP50-202ENST00000396096 ZNF683Q8IZ20 524 aa17.07■□□□□ 0.32
NUP50-202ENST00000396096 SLC43A3Q8NBI5 491 aa17.07■□□□□ 0.32
NUP50-202ENST00000396096 PPP4R1Q8TF05 950 aa17.07■□□□□ 0.32
NUP50-202ENST00000396096 NDFIP2Q9NV92 336 aa17.07■□□□□ 0.32
NUP50-202ENST00000396096 DNAJC28Q9NX36 388 aa17.07■□□□□ 0.32
NUP50-202ENST00000396096 TAGLN3Q9UI15 199 aa17.07■□□□□ 0.32
NUP50-202ENST00000396096 TTC3P53804 2025 aa17.07■□□□□ 0.32
NUP50-202ENST00000396096 FAM92AA1XBS5 289 aa17.06■□□□□ 0.32
NUP50-202ENST00000396096 G3V2L1 256 aa17.06■□□□□ 0.32
NUP50-202ENST00000396096 SIN3BO75182 1162 aa17.06■□□□□ 0.32
NUP50-202ENST00000396096 H2AFYO75367 372 aaKnown RBP17.06■□□□□ 0.32
NUP50-202ENST00000396096 LMNAP02545 664 aaKnown RBP17.06■□□□□ 0.32
NUP50-202ENST00000396096 HLA-DQB2P05538 268 aa17.06■□□□□ 0.32
NUP50-202ENST00000396096 APOA4P06727 396 aa17.06■□□□□ 0.32
NUP50-202ENST00000396096 PIK3R6Q5UE93 754 aa17.06■□□□□ 0.32
NUP50-202ENST00000396096 UMODL1-AS1Q8N2C9 162 aa17.06■□□□□ 0.32
NUP50-202ENST00000396096 TEX9Q8N6V9 391 aa17.06■□□□□ 0.32
NUP50-202ENST00000396096 GLT1D1Q96MS3 346 aa17.06■□□□□ 0.32
NUP50-202ENST00000396096 EBF4Q9BQW3 602 aa17.06■□□□□ 0.32
NUP50-202ENST00000396096 TSEN34Q9BSV6 310 aaKnown RBP17.06■□□□□ 0.32
NUP50-202ENST00000396096 PRDM5Q9NQX1 630 aaPredicted RBP17.06■□□□□ 0.32
NUP50-202ENST00000396096 ZNF358Q9NW07 568 aa17.06■□□□□ 0.32
NUP50-202ENST00000396096 MID2Q9UJV3 735 aa17.06■□□□□ 0.32
NUP50-202ENST00000396096 PCDHB12Q9Y5F1 795 aa17.06■□□□□ 0.32
NUP50-202ENST00000396096 TMEM114B3SHH9 223 aa17.05■□□□□ 0.32
NUP50-202ENST00000396096 MT-CYBP00156 380 aaPredicted RBP17.05■□□□□ 0.32
NUP50-202ENST00000396096 MYL4P12829 197 aa17.05■□□□□ 0.32
NUP50-202ENST00000396096 ARRB2P32121 409 aa17.05■□□□□ 0.32
NUP50-202ENST00000396096 OR1G1P47890 313 aa17.05■□□□□ 0.32
NUP50-202ENST00000396096 PAPOLAP51003 745 aaKnown RBP17.05■□□□□ 0.32
NUP50-202ENST00000396096 NDST2P52849 883 aa17.05■□□□□ 0.32
NUP50-202ENST00000396096 SP3Q02447 781 aa17.05■□□□□ 0.32
NUP50-202ENST00000396096 MRPL58Q14197 206 aaKnown RBP17.05■□□□□ 0.32
NUP50-202ENST00000396096 UGP2Q16851 508 aa17.05■□□□□ 0.32
NUP50-202ENST00000396096 ACCSLQ4AC99 568 aa17.05■□□□□ 0.32
NUP50-202ENST00000396096 RABGAP1LQ5R372 815 aa17.05■□□□□ 0.32
NUP50-202ENST00000396096 TLDC1Q6P9B6 456 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms