RNA–Protein interactions for RNA: ENST00000394609.6

RTN4-205, Transcript of reticulon 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-205ENST00000394609 VANGL2Q9ULK5 521 aa7.11□□□□□ -1.27
RTN4-205ENST00000394609 RPL26L1Q9UNX3 145 aaKnown RBP7.11□□□□□ -1.27
RTN4-205ENST00000394609 NEU3Q9UQ49 428 aa7.11□□□□□ -1.27
RTN4-205ENST00000394609 YIPF1Q9Y548 306 aa7.11□□□□□ -1.27
RTN4-205ENST00000394609 INSL6Q9Y581 213 aa7.11□□□□□ -1.27
RTN4-205ENST00000394609 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.11□□□□□ -1.27
RTN4-205ENST00000394609 SLC4A7Q9Y6M7 1214 aa7.11□□□□□ -1.27
RTN4-205ENST00000394609 ZNF840PA6NDX5 716 aa7.1□□□□□ -1.27
RTN4-205ENST00000394609 HACD1B0YJ81 288 aa7.1□□□□□ -1.27
RTN4-205ENST00000394609 DFFAO00273 331 aa7.1□□□□□ -1.27
RTN4-205ENST00000394609 CXCL14O95715 111 aa7.1□□□□□ -1.27
RTN4-205ENST00000394609 APOEP02649 317 aa7.1□□□□□ -1.27
RTN4-205ENST00000394609 CNPP09543 421 aaKnown RBP7.1□□□□□ -1.27
RTN4-205ENST00000394609 ZDHHC11BP0C7U3 371 aa7.1□□□□□ -1.27
RTN4-205ENST00000394609 SLC2A3P11169 496 aa7.1□□□□□ -1.27
RTN4-205ENST00000394609 NEFHP12036 1026 aa7.1□□□□□ -1.27
RTN4-205ENST00000394609 ATP2A2P16615 1042 aaKnown RBP7.1□□□□□ -1.27
RTN4-205ENST00000394609 MX2P20592 715 aa7.1□□□□□ -1.27
RTN4-205ENST00000394609 PPM1AP35813 382 aa7.1□□□□□ -1.27
RTN4-205ENST00000394609 MMP13P45452 471 aa7.1□□□□□ -1.27
RTN4-205ENST00000394609 WASHC5Q12768 1159 aa7.1□□□□□ -1.27
RTN4-205ENST00000394609 AUHQ13825 339 aaKnown RBP7.1□□□□□ -1.27
RTN4-205ENST00000394609 TRIP4Q15650 581 aaPredicted RBP7.1□□□□□ -1.27
RTN4-205ENST00000394609 PDCD2Q16342 344 aaPredicted RBP7.1□□□□□ -1.27
RTN4-205ENST00000394609 BBS9Q3SYG4 887 aa7.1□□□□□ -1.27
RTN4-205ENST00000394609 MS4A13Q5J8X5 152 aa7.1□□□□□ -1.27
RTN4-205ENST00000394609 ANKRD20A2Q5SQ80 823 aa7.1□□□□□ -1.27
RTN4-205ENST00000394609 ARTNQ5T4W7 220 aa7.1□□□□□ -1.27
RTN4-205ENST00000394609 ANKRD20A1Q5TYW2 823 aa7.1□□□□□ -1.27
RTN4-205ENST00000394609 ANKRD20A3Q5VUR7 823 aa7.1□□□□□ -1.27
RTN4-205ENST00000394609 CAPRIN2Q6IMN6 1127 aaKnown RBP7.1□□□□□ -1.27
RTN4-205ENST00000394609 ARHGEF18Q6ZSZ5 1173 aa7.1□□□□□ -1.27
RTN4-205ENST00000394609 CENPUQ71F23 418 aa7.1□□□□□ -1.27
RTN4-205ENST00000394609 PDZD4Q76G19 769 aaPredicted RBP7.1□□□□□ -1.27
RTN4-205ENST00000394609 TMC7Q7Z402 723 aa7.1□□□□□ -1.27
RTN4-205ENST00000394609 SPRED2Q7Z698 418 aa7.1□□□□□ -1.27
RTN4-205ENST00000394609 TFAP2DQ7Z6R9 452 aa7.1□□□□□ -1.27
RTN4-205ENST00000394609 DNAJB7Q7Z6W7 309 aaPredicted RBP7.1□□□□□ -1.27
RTN4-205ENST00000394609 HERC6Q8IVU3 1022 aa7.1□□□□□ -1.27
RTN4-205ENST00000394609 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.1□□□□□ -1.27
RTN4-205ENST00000394609 EPS8L3Q8TE67 593 aaKnown RBP7.1□□□□□ -1.27
RTN4-205ENST00000394609 NSMCE1Q8WV22 266 aa7.1□□□□□ -1.27
RTN4-205ENST00000394609 FAM210AQ96ND0 272 aa7.1□□□□□ -1.27
RTN4-205ENST00000394609 TTLL2Q9BWV7 592 aa7.1□□□□□ -1.27
RTN4-205ENST00000394609 KLC2Q9H0B6 622 aa7.1□□□□□ -1.27
RTN4-205ENST00000394609 RABEP2Q9H5N1 569 aa7.1□□□□□ -1.27
RTN4-205ENST00000394609 PRDM16Q9HAZ2 1276 aa7.1□□□□□ -1.27
RTN4-205ENST00000394609 TIMMDC1Q9NPL8 285 aa7.1□□□□□ -1.27
RTN4-205ENST00000394609 OLA1Q9NTK5 396 aaKnown RBP7.1□□□□□ -1.27
RTN4-205ENST00000394609 SAMD15Q9P1V8 674 aa7.1□□□□□ -1.27
RTN4-205ENST00000394609 PTPRDP23468 1912 aa7.1□□□□□ -1.27
RTN4-205ENST00000394609 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.09□□□□□ -1.27
RTN4-205ENST00000394609 A0A0A0MRY4 1105 aa7.09□□□□□ -1.27
RTN4-205ENST00000394609 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.09□□□□□ -1.27
RTN4-205ENST00000394609 A6NHS1 94 aa7.09□□□□□ -1.27
RTN4-205ENST00000394609 ALOX15BO15296 676 aa7.09□□□□□ -1.27
RTN4-205ENST00000394609 COCHO43405 550 aa7.09□□□□□ -1.27
RTN4-205ENST00000394609 TGM5O43548 720 aa7.09□□□□□ -1.27
RTN4-205ENST00000394609 PIAS1O75925 651 aa7.09□□□□□ -1.27
RTN4-205ENST00000394609 STK10O94804 968 aaKnown RBP7.09□□□□□ -1.27
RTN4-205ENST00000394609 AGTP01019 485 aa7.09□□□□□ -1.27
RTN4-205ENST00000394609 F11P03951 625 aa7.09□□□□□ -1.27
RTN4-205ENST00000394609 CSH1P0DML2 217 aa7.09□□□□□ -1.27
RTN4-205ENST00000394609 CSH2P0DML3 217 aa7.09□□□□□ -1.27
RTN4-205ENST00000394609 CTSAP10619 480 aa7.09□□□□□ -1.27
RTN4-205ENST00000394609 MYOGP15173 224 aa7.09□□□□□ -1.27
RTN4-205ENST00000394609 HPDP32754 393 aaPredicted RBP7.09□□□□□ -1.27
RTN4-205ENST00000394609 GCKP35557 465 aa7.09□□□□□ -1.27
RTN4-205ENST00000394609 ATP5C1P36542 298 aaKnown RBP7.09□□□□□ -1.27
RTN4-205ENST00000394609 GARSP41250 739 aaKnown RBP7.09□□□□□ -1.27
RTN4-205ENST00000394609 NUMBP49757 651 aa7.09□□□□□ -1.27
RTN4-205ENST00000394609 ZNF135P52742 658 aaPredicted RBP7.09□□□□□ -1.27
RTN4-205ENST00000394609 ARL4CP56559 192 aa7.09□□□□□ -1.27
RTN4-205ENST00000394609 ERVFC1P60507 584 aa7.09□□□□□ -1.27
RTN4-205ENST00000394609 GALNT2Q10471 571 aa7.09□□□□□ -1.27
RTN4-205ENST00000394609 KCNJ11Q14654 390 aa7.09□□□□□ -1.27
RTN4-205ENST00000394609 VEPH1Q14D04 833 aa7.09□□□□□ -1.27
RTN4-205ENST00000394609 LONRF1Q17RB8 773 aa7.09□□□□□ -1.27
RTN4-205ENST00000394609 GALNTL6Q49A17 601 aa7.09□□□□□ -1.27
RTN4-205ENST00000394609 HECTD3Q5T447 861 aa7.09□□□□□ -1.27
RTN4-205ENST00000394609 MANEALQ5VSG8 457 aa7.09□□□□□ -1.27
RTN4-205ENST00000394609 RAP1GAP2Q684P5 730 aa7.09□□□□□ -1.27
RTN4-205ENST00000394609 ARHGAP36Q6ZRI8 547 aa7.09□□□□□ -1.27
RTN4-205ENST00000394609 TRPM8Q7Z2W7 1104 aa7.09□□□□□ -1.27
RTN4-205ENST00000394609 PID1Q7Z2X4 250 aa7.09□□□□□ -1.27
RTN4-205ENST00000394609 CIR1Q86X95 450 aaPredicted RBP7.09□□□□□ -1.27
RTN4-205ENST00000394609 PDIK1LQ8N165 341 aa7.09□□□□□ -1.27
RTN4-205ENST00000394609 ZNF567Q8N184 647 aa7.09□□□□□ -1.27
RTN4-205ENST00000394609 ZFAND2BQ8WV99 257 aa7.09□□□□□ -1.27
RTN4-205ENST00000394609 CLP1Q92989 425 aaKnown RBP7.09□□□□□ -1.27
RTN4-205ENST00000394609 TBC1D31Q96DN5 1066 aa7.09□□□□□ -1.27
RTN4-205ENST00000394609 SPATA13Q96N96 652 aa7.09□□□□□ -1.27
RTN4-205ENST00000394609 AGAP3Q96P47 875 aa7.09□□□□□ -1.27
RTN4-205ENST00000394609 RAD9AQ99638 391 aa7.09□□□□□ -1.27
RTN4-205ENST00000394609 TCF25Q9BQ70 676 aa7.09□□□□□ -1.27
RTN4-205ENST00000394609 WDR83Q9BRX9 315 aaKnown RBP7.09□□□□□ -1.27
RTN4-205ENST00000394609 FOXP3Q9BZS1 431 aa7.09□□□□□ -1.27
RTN4-205ENST00000394609 RNF38Q9H0F5 515 aa7.09□□□□□ -1.27
RTN4-205ENST00000394609 ZBP1Q9H171 429 aa7.09□□□□□ -1.27
RTN4-205ENST00000394609 VPS37BQ9H9H4 285 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms