RNA–Protein interactions for RNA: ENST00000394440.7

CCT4-201, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT4, Length 2,520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-201ENST00000394440 LINC00523Q86TU6 105 aa15.23■□□□□ 0.03
CCT4-201ENST00000394440 UNC5BQ8IZJ1 945 aa15.23■□□□□ 0.03
CCT4-201ENST00000394440 MGARPQ8TDB4 240 aa15.23■□□□□ 0.03
CCT4-201ENST00000394440 CHMP6Q96FZ7 201 aa15.23■□□□□ 0.03
CCT4-201ENST00000394440 UGT1A7Q9HAW7 530 aa15.23■□□□□ 0.03
CCT4-201ENST00000394440 UGT1A10Q9HAW8 530 aa15.23■□□□□ 0.03
CCT4-201ENST00000394440 UGT1A8Q9HAW9 530 aa15.23■□□□□ 0.03
CCT4-201ENST00000394440 GKN1Q9NS71 199 aa15.23■□□□□ 0.03
CCT4-201ENST00000394440 AP3B1O00203 1094 aa15.23■□□□□ 0.03
CCT4-201ENST00000394440 ASMTLO95671 621 aa15.23■□□□□ 0.03
CCT4-201ENST00000394440 OR1E1P30953 314 aa15.23■□□□□ 0.03
CCT4-201ENST00000394440 CORO1AP31146 461 aaKnown RBP15.23■□□□□ 0.03
CCT4-201ENST00000394440 NPY2RP49146 381 aa15.23■□□□□ 0.03
CCT4-201ENST00000394440 IL10RBQ08334 325 aa15.23■□□□□ 0.03
CCT4-201ENST00000394440 POLD3Q15054 466 aaPredicted RBP15.23■□□□□ 0.03
CCT4-201ENST00000394440 SPANXN3Q5MJ09 141 aa15.23■□□□□ 0.03
CCT4-201ENST00000394440 TTC39BQ5VTQ0 682 aaPredicted RBP15.23■□□□□ 0.03
CCT4-201ENST00000394440 ITIH5Q86UX2 942 aa15.23■□□□□ 0.03
CCT4-201ENST00000394440 DENND1CQ8IV53 801 aa15.23■□□□□ 0.03
CCT4-201ENST00000394440 DNAAF3Q8N9W5 541 aa15.23■□□□□ 0.03
CCT4-201ENST00000394440 CKAP2Q8WWK9 683 aa15.23■□□□□ 0.03
CCT4-201ENST00000394440 WBP2Q969T9 261 aa15.23■□□□□ 0.03
CCT4-201ENST00000394440 APOL2Q9BQE5 337 aa15.23■□□□□ 0.03
CCT4-201ENST00000394440 NKIRAS1Q9NYS0 192 aa15.23■□□□□ 0.03
CCT4-201ENST00000394440 PRKAG2Q9UGJ0 569 aa15.23■□□□□ 0.03
CCT4-201ENST00000394440 LAMA2P24043 3122 aaKnown RBP15.23■□□□□ 0.03
CCT4-201ENST00000394440 POLBP06746 335 aa15.22■□□□□ 0.03
CCT4-201ENST00000394440 DRD4P21917 467 aa15.22■□□□□ 0.03
CCT4-201ENST00000394440 RENBPP51606 427 aa15.22■□□□□ 0.03
CCT4-201ENST00000394440 GEMP55040 296 aa15.22■□□□□ 0.03
CCT4-201ENST00000394440 SLC10A7Q0GE19 358 aa15.22■□□□□ 0.03
CCT4-201ENST00000394440 CERCAMQ5T4B2 595 aa15.22■□□□□ 0.03
CCT4-201ENST00000394440 DENND5AQ6IQ26 1287 aa15.22■□□□□ 0.03
CCT4-201ENST00000394440 PSRC1Q6PGN9 363 aaPredicted RBP15.22■□□□□ 0.03
CCT4-201ENST00000394440 HERC6Q8IVU3 1022 aa15.22■□□□□ 0.03
CCT4-201ENST00000394440 BANPQ8N9N5 519 aa15.22■□□□□ 0.03
CCT4-201ENST00000394440 ALKBH8Q96BT7 664 aaKnown RBP15.22■□□□□ 0.03
CCT4-201ENST00000394440 SERAC1Q96JX3 654 aa15.22■□□□□ 0.03
CCT4-201ENST00000394440 IL22Q9GZX6 179 aa15.22■□□□□ 0.03
CCT4-201ENST00000394440 MLXIPLQ9NP71 852 aa15.22■□□□□ 0.03
CCT4-201ENST00000394440 SAMD15Q9P1V8 674 aa15.22■□□□□ 0.03
CCT4-201ENST00000394440 STOML2Q9UJZ1 356 aa15.22■□□□□ 0.03
CCT4-201ENST00000394440 ASB3Q9Y575 518 aa15.22■□□□□ 0.03
CCT4-201ENST00000394440 IRAK3Q9Y616 596 aa15.22■□□□□ 0.03
CCT4-201ENST00000394440 RPS6KL1Q9Y6S9 549 aa15.22■□□□□ 0.03
CCT4-201ENST00000394440 HELZP42694 1942 aaKnown RBP15.22■□□□□ 0.03
CCT4-201ENST00000394440 ZCWPW2A0A1B0GU75 182 aa15.22■□□□□ 0.03
CCT4-201ENST00000394440 HMX2A2RU54 273 aa15.22■□□□□ 0.03
CCT4-201ENST00000394440 USP1O94782 785 aa15.22■□□□□ 0.03
CCT4-201ENST00000394440 CDH4P55283 916 aa15.22■□□□□ 0.03
CCT4-201ENST00000394440 SLC18A2Q05940 514 aa15.22■□□□□ 0.03
CCT4-201ENST00000394440 NAB1Q13506 487 aa15.22■□□□□ 0.03
CCT4-201ENST00000394440 CFAP52Q8N1V2 620 aa15.22■□□□□ 0.03
CCT4-201ENST00000394440 FCRL3Q96P31 734 aaPredicted RBP15.22■□□□□ 0.03
CCT4-201ENST00000394440 TBL1YQ9BQ87 522 aa15.22■□□□□ 0.03
CCT4-201ENST00000394440 LRRC3Q9BY71 257 aa15.22■□□□□ 0.03
CCT4-201ENST00000394440 SLC25A51Q9H1U9 297 aa15.22■□□□□ 0.03
CCT4-201ENST00000394440 SP110Q9HB58 689 aa15.22■□□□□ 0.03
CCT4-201ENST00000394440 PDFQ9HBH1 243 aa15.22■□□□□ 0.03
CCT4-201ENST00000394440 AGO1Q9UL18 857 aaKnown RBP15.22■□□□□ 0.03
CCT4-201ENST00000394440 SOX13Q9UN79 622 aa15.22■□□□□ 0.03
CCT4-201ENST00000394440 ZFP37Q9Y6Q3 630 aaPredicted RBP15.22■□□□□ 0.03
CCT4-201ENST00000394440 FAM237BA0A1B0GVD1 139 aa15.21■□□□□ 0.03
CCT4-201ENST00000394440 SPATA31D3P0C874 917 aa15.21■□□□□ 0.03
CCT4-201ENST00000394440 RPA3P35244 121 aaPredicted RBP15.21■□□□□ 0.03
CCT4-201ENST00000394440 ACVRL1P37023 503 aa15.21■□□□□ 0.03
CCT4-201ENST00000394440 CCT5P48643 541 aa15.21■□□□□ 0.03
CCT4-201ENST00000394440 QPCTQ16769 361 aa15.21■□□□□ 0.03
CCT4-201ENST00000394440 KDELC1Q6UW63 502 aa15.21■□□□□ 0.03
CCT4-201ENST00000394440 SPATA31D4Q6ZUB0 917 aa15.21■□□□□ 0.03
CCT4-201ENST00000394440 CCDC117Q8IWD4 279 aaPredicted RBP15.21■□□□□ 0.03
CCT4-201ENST00000394440 HERVK_113Q902F9 699 aa15.21■□□□□ 0.03
CCT4-201ENST00000394440 IMP4Q96G21 291 aaKnown RBP15.21■□□□□ 0.03
CCT4-201ENST00000394440 CERS2Q96G23 380 aa15.21■□□□□ 0.03
CCT4-201ENST00000394440 MRGPRX2Q96LB1 330 aa15.21■□□□□ 0.03
CCT4-201ENST00000394440 KLHL5Q96PQ7 755 aa15.21■□□□□ 0.03
CCT4-201ENST00000394440 SLC22A12Q96S37 553 aa15.21■□□□□ 0.03
CCT4-201ENST00000394440 RAD9AQ99638 391 aa15.21■□□□□ 0.03
CCT4-201ENST00000394440 ZBED2Q9BTP6 218 aa15.21■□□□□ 0.03
CCT4-201ENST00000394440 FAM169AQ9Y6X4 670 aa15.21■□□□□ 0.03
CCT4-201ENST00000394440 DOCK6Q96HP0 2047 aa15.21■□□□□ 0.03
CCT4-201ENST00000394440 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.21■□□□□ 0.03
CCT4-201ENST00000394440 LCHNA4D1U4 455 aa15.21■□□□□ 0.03
CCT4-201ENST00000394440 TRIM49D1C9J1S8 452 aa15.21■□□□□ 0.03
CCT4-201ENST00000394440 PRAMEF11O60813 436 aa15.21■□□□□ 0.03
CCT4-201ENST00000394440 KRT37O76014 449 aa15.21■□□□□ 0.03
CCT4-201ENST00000394440 SNRPAP09012 282 aaKnown RBP15.21■□□□□ 0.03
CCT4-201ENST00000394440 CA4P22748 312 aa15.21■□□□□ 0.03
CCT4-201ENST00000394440 HOXD9P28356 352 aaPredicted RBP15.21■□□□□ 0.03
CCT4-201ENST00000394440 RPS24P62847 133 aaKnown RBP15.21■□□□□ 0.03
CCT4-201ENST00000394440 RABGAP1LQ5R372 815 aa15.21■□□□□ 0.03
CCT4-201ENST00000394440 ADGRF1Q5T601 910 aa15.21■□□□□ 0.03
CCT4-201ENST00000394440 MARC1Q5VT66 337 aa15.21■□□□□ 0.03
CCT4-201ENST00000394440 RANBP10Q6VN20 620 aa15.21■□□□□ 0.03
CCT4-201ENST00000394440 TMC8Q8IU68 726 aa15.21■□□□□ 0.03
CCT4-201ENST00000394440 OR52K2Q8NGK3 314 aa15.21■□□□□ 0.03
CCT4-201ENST00000394440 ADAMTS19Q8TE59 1207 aa15.21■□□□□ 0.03
CCT4-201ENST00000394440 TADA1Q96BN2 335 aa15.21■□□□□ 0.03
CCT4-201ENST00000394440 PABPC5Q96DU9 382 aaKnown RBP15.21■□□□□ 0.03
CCT4-201ENST00000394440 MAGEB16A2A368 324 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms