RNA–Protein interactions for RNA: ENST00000394243.5

SYNPO-202, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNPO, Length 7,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-202ENST00000394243 BANF1O75531 89 aa12□□□□□ -0.49
SYNPO-202ENST00000394243 MMP13P45452 471 aa12□□□□□ -0.49
SYNPO-202ENST00000394243 TPTEP56180 551 aa12□□□□□ -0.49
SYNPO-202ENST00000394243 RTP1P59025 263 aa12□□□□□ -0.49
SYNPO-202ENST00000394243 SLC9A4Q6AI14 798 aa12□□□□□ -0.49
SYNPO-202ENST00000394243 C3orf67Q6ZVT6 689 aa12□□□□□ -0.49
SYNPO-202ENST00000394243 ZNF720Q7Z2F6 126 aa12□□□□□ -0.49
SYNPO-202ENST00000394243 TAMM41Q96BW9 452 aa12□□□□□ -0.49
SYNPO-202ENST00000394243 CELF6Q96J87 481 aaKnown RBP12□□□□□ -0.49
SYNPO-202ENST00000394243 MOV10Q9HCE1 1003 aaKnown RBP12□□□□□ -0.49
SYNPO-202ENST00000394243 TAS2R13Q9NYV9 303 aa12□□□□□ -0.49
SYNPO-202ENST00000394243 KIAA1257Q9ULG3 409 aa12□□□□□ -0.49
SYNPO-202ENST00000394243 FADS3Q9Y5Q0 445 aa12□□□□□ -0.49
SYNPO-202ENST00000394243 E7ENX8 843 aa12□□□□□ -0.49
SYNPO-202ENST00000394243 CYP27B1O15528 508 aa12□□□□□ -0.49
SYNPO-202ENST00000394243 NR4A1P22736 598 aa12□□□□□ -0.49
SYNPO-202ENST00000394243 SLC41A1Q8IVJ1 513 aa12□□□□□ -0.49
SYNPO-202ENST00000394243 ABI2Q9NYB9 513 aaPredicted RBP12□□□□□ -0.49
SYNPO-202ENST00000394243 N6AMT1Q9Y5N5 214 aa12□□□□□ -0.49
SYNPO-202ENST00000394243 ASB14A6NK59 587 aa12□□□□□ -0.49
SYNPO-202ENST00000394243 TTLL13PA6NNM8 815 aa12□□□□□ -0.49
SYNPO-202ENST00000394243 ZNF879B4DU55 563 aa12□□□□□ -0.49
SYNPO-202ENST00000394243 STK25O00506 426 aa12□□□□□ -0.49
SYNPO-202ENST00000394243 CYP2C9P11712 490 aa12□□□□□ -0.49
SYNPO-202ENST00000394243 PRG2P13727 222 aa12□□□□□ -0.49
SYNPO-202ENST00000394243 CDC42EP1Q00587 391 aa12□□□□□ -0.49
SYNPO-202ENST00000394243 BNIP2Q12982 314 aa12□□□□□ -0.49
SYNPO-202ENST00000394243 CDH18Q13634 790 aa12□□□□□ -0.49
SYNPO-202ENST00000394243 CRYL1Q9Y2S2 319 aa12□□□□□ -0.49
SYNPO-202ENST00000394243 H3BNX3 289 aa12□□□□□ -0.49
SYNPO-202ENST00000394243 NCAM2O15394 837 aa12□□□□□ -0.49
SYNPO-202ENST00000394243 EDF1O60869 148 aaKnown RBP12□□□□□ -0.49
SYNPO-202ENST00000394243 SH3BGRLO75368 114 aa12□□□□□ -0.49
SYNPO-202ENST00000394243 ACAT1P24752 427 aaKnown RBP12□□□□□ -0.49
SYNPO-202ENST00000394243 EPHA3P29320 983 aa12□□□□□ -0.49
SYNPO-202ENST00000394243 GPR15P49685 360 aa12□□□□□ -0.49
SYNPO-202ENST00000394243 PRR5LQ6MZQ0 368 aa12□□□□□ -0.49
SYNPO-202ENST00000394243 ARMC8Q8IUR7 673 aa12□□□□□ -0.49
SYNPO-202ENST00000394243 OR8H3Q8N146 312 aa12□□□□□ -0.49
SYNPO-202ENST00000394243 GALNT15Q8N3T1 639 aa12□□□□□ -0.49
SYNPO-202ENST00000394243 ADCY4Q8NFM4 1077 aa12□□□□□ -0.49
SYNPO-202ENST00000394243 TMEM176AQ96HP8 235 aa12□□□□□ -0.49
SYNPO-202ENST00000394243 DNAJC1Q96KC8 554 aaKnown RBP12□□□□□ -0.49
SYNPO-202ENST00000394243 CCDC115Q96NT0 180 aa12□□□□□ -0.49
SYNPO-202ENST00000394243 NPAS2Q99743 824 aa12□□□□□ -0.49
SYNPO-202ENST00000394243 CIB1Q99828 191 aa12□□□□□ -0.49
SYNPO-202ENST00000394243 GPATCH1Q9BRR8 931 aaKnown RBP12□□□□□ -0.49
SYNPO-202ENST00000394243 SAE1Q9UBE0 346 aaPredicted RBP12□□□□□ -0.49
SYNPO-202ENST00000394243 RPS6KA6Q9UK32 745 aa12□□□□□ -0.49
SYNPO-202ENST00000394243 SQORQ9Y6N5 450 aa12□□□□□ -0.49
SYNPO-202ENST00000394243 DNM1LO00429 736 aa11.99□□□□□ -0.49
SYNPO-202ENST00000394243 NRP2O60462 931 aa11.99□□□□□ -0.49
SYNPO-202ENST00000394243 F9P00740 461 aa11.99□□□□□ -0.49
SYNPO-202ENST00000394243 ZNF12P17014 697 aa11.99□□□□□ -0.49
SYNPO-202ENST00000394243 AMPD1P23109 780 aa11.99□□□□□ -0.49
SYNPO-202ENST00000394243 NR2C2P49116 596 aa11.99□□□□□ -0.49
SYNPO-202ENST00000394243 TROAPQ12815 778 aa11.99□□□□□ -0.49
SYNPO-202ENST00000394243 MTMR2Q13614 643 aa11.99□□□□□ -0.49
SYNPO-202ENST00000394243 PFKFB4Q16877 469 aa11.99□□□□□ -0.49
SYNPO-202ENST00000394243 ART4Q93070 314 aa11.99□□□□□ -0.49
SYNPO-202ENST00000394243 ABCB9Q9NP78 766 aa11.99□□□□□ -0.49
SYNPO-202ENST00000394243 KLK14Q9P0G3 267 aa11.99□□□□□ -0.49
SYNPO-202ENST00000394243 LEF1Q9UJU2 399 aaPredicted RBP11.99□□□□□ -0.49
SYNPO-202ENST00000394243 PCDHGA10Q9Y5H3 936 aa11.99□□□□□ -0.49
SYNPO-202ENST00000394243 C2orf71A6NGG8 1288 aa11.99□□□□□ -0.49
SYNPO-202ENST00000394243 SAGE2PA6NJ88 616 aa11.99□□□□□ -0.49
SYNPO-202ENST00000394243 PEX11AO75192 247 aa11.99□□□□□ -0.49
SYNPO-202ENST00000394243 CRATP43155 626 aa11.99□□□□□ -0.49
SYNPO-202ENST00000394243 SLC5A3P53794 718 aa11.99□□□□□ -0.49
SYNPO-202ENST00000394243 MYL6P60660 151 aa11.99□□□□□ -0.49
SYNPO-202ENST00000394243 IL18Q14116 193 aa11.99□□□□□ -0.49
SYNPO-202ENST00000394243 RNASE12Q5GAN4 147 aaKnown RBP11.99□□□□□ -0.49
SYNPO-202ENST00000394243 CBWD3Q5JTY5 395 aa11.99□□□□□ -0.49
SYNPO-202ENST00000394243 CBWD5Q5RIA9 395 aa11.99□□□□□ -0.49
SYNPO-202ENST00000394243 ZNF613Q6PF04 617 aa11.99□□□□□ -0.49
SYNPO-202ENST00000394243 ARCQ7LC44 396 aa11.99□□□□□ -0.49
SYNPO-202ENST00000394243 MASTLQ96GX5 879 aa11.99□□□□□ -0.49
SYNPO-202ENST00000394243 CGRRF1Q99675 332 aa11.99□□□□□ -0.49
SYNPO-202ENST00000394243 PCDHA11Q9Y5I1 949 aa11.99□□□□□ -0.49
SYNPO-202ENST00000394243 ALDH1A2O94788 518 aa11.99□□□□□ -0.49
SYNPO-202ENST00000394243 GJB6O95452 261 aa11.99□□□□□ -0.49
SYNPO-202ENST00000394243 PGK1P00558 417 aa11.99□□□□□ -0.49
SYNPO-202ENST00000394243 CYP1A1P04798 512 aaPredicted RBP11.99□□□□□ -0.49
SYNPO-202ENST00000394243 ZNF806P0C7X5 589 aa11.99□□□□□ -0.49
SYNPO-202ENST00000394243 RBL1P28749 1068 aa11.99□□□□□ -0.49
SYNPO-202ENST00000394243 BCAT1P54687 386 aa11.99□□□□□ -0.49
SYNPO-202ENST00000394243 CRADDP78560 199 aa11.99□□□□□ -0.49
SYNPO-202ENST00000394243 SV2AQ7L0J3 742 aa11.99□□□□□ -0.49
SYNPO-202ENST00000394243 SYT12Q8IV01 421 aa11.99□□□□□ -0.49
SYNPO-202ENST00000394243 HERC6Q8IVU3 1022 aa11.99□□□□□ -0.49
SYNPO-202ENST00000394243 AADATQ8N5Z0 425 aa11.99□□□□□ -0.49
SYNPO-202ENST00000394243 TPK1Q9H3S4 243 aa11.99□□□□□ -0.49
SYNPO-202ENST00000394243 PTTG2Q9NZH5 202 aa11.99□□□□□ -0.49
SYNPO-202ENST00000394243 SNX7Q9UNH6 387 aa11.99□□□□□ -0.49
SYNPO-202ENST00000394243 PRKAB1Q9Y478 270 aa11.99□□□□□ -0.49
SYNPO-202ENST00000394243 FAM86B1E9PN63 330 aa11.99□□□□□ -0.49
SYNPO-202ENST00000394243 F5H5T6 163 aa11.99□□□□□ -0.49
SYNPO-202ENST00000394243 C21orf2O43822 256 aa11.99□□□□□ -0.49
SYNPO-202ENST00000394243 CTSHP09668 335 aa11.99□□□□□ -0.49
SYNPO-202ENST00000394243 MYL9P24844 172 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms