RNA–Protein interactions for RNA: ENST00000393278.6

MBD4-202, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 1 (best) BASIC

Gene MBD4, Length 1,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-202ENST00000393278 TSPAN3O60637 253 aa17.83■□□□□ 0.44
MBD4-202ENST00000393278 PRAMEF11O60813 436 aa17.83■□□□□ 0.44
MBD4-202ENST00000393278 ANXA9O76027 345 aa17.83■□□□□ 0.44
MBD4-202ENST00000393278 HNRNPA1P09651 372 aaKnown RBP eCLIP17.83■□□□□ 0.44
MBD4-202ENST00000393278 PTPN2P17706 415 aa17.83■□□□□ 0.44
MBD4-202ENST00000393278 MGAT1P26572 445 aa17.83■□□□□ 0.44
MBD4-202ENST00000393278 HPDP32754 393 aaPredicted RBP17.83■□□□□ 0.44
MBD4-202ENST00000393278 STX2P32856 288 aa17.83■□□□□ 0.44
MBD4-202ENST00000393278 GEMIN4P57678 1058 aaKnown RBP17.83■□□□□ 0.44
MBD4-202ENST00000393278 SESN2P58004 480 aaPredicted RBP17.83■□□□□ 0.44
MBD4-202ENST00000393278 GNA12Q03113 381 aa17.83■□□□□ 0.44
MBD4-202ENST00000393278 OLIG2Q13516 323 aa17.83■□□□□ 0.44
MBD4-202ENST00000393278 STXBP5Q5T5C0 1151 aa17.83■□□□□ 0.44
MBD4-202ENST00000393278 MARC1Q5VT66 337 aa17.83■□□□□ 0.44
MBD4-202ENST00000393278 SETD3Q86TU7 594 aaPredicted RBP17.83■□□□□ 0.44
MBD4-202ENST00000393278 FAM217AQ8IXS0 508 aa17.83■□□□□ 0.44
MBD4-202ENST00000393278 ARFGAP2Q8N6H7 521 aa17.83■□□□□ 0.44
MBD4-202ENST00000393278 OR52K2Q8NGK3 314 aa17.83■□□□□ 0.44
MBD4-202ENST00000393278 OR52K1Q8NGK4 314 aa17.83■□□□□ 0.44
MBD4-202ENST00000393278 SHKBP1Q8TBC3 707 aa17.83■□□□□ 0.44
MBD4-202ENST00000393278 NSMCE1Q8WV22 266 aa17.83■□□□□ 0.44
MBD4-202ENST00000393278 PABPC5Q96DU9 382 aaKnown RBP17.83■□□□□ 0.44
MBD4-202ENST00000393278 STAMBPL1Q96FJ0 436 aa17.83■□□□□ 0.44
MBD4-202ENST00000393278 SLC46A2Q9BY10 475 aa17.83■□□□□ 0.44
MBD4-202ENST00000393278 PIH1D1Q9NWS0 290 aaKnown RBP17.83■□□□□ 0.44
MBD4-202ENST00000393278 UBP1Q9NZI7 540 aa17.83■□□□□ 0.44
MBD4-202ENST00000393278 CHD5Q8TDI0 1954 aa17.82■□□□□ 0.44
MBD4-202ENST00000393278 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.82■□□□□ 0.44
MBD4-202ENST00000393278 A0A0D9SEW6 157 aa17.82■□□□□ 0.44
MBD4-202ENST00000393278 ILVBLA1L0T0 632 aa17.82■□□□□ 0.44
MBD4-202ENST00000393278 USP12O75317 370 aa17.82■□□□□ 0.44
MBD4-202ENST00000393278 GEMP55040 296 aa17.82■□□□□ 0.44
MBD4-202ENST00000393278 PPP2R2AP63151 447 aa17.82■□□□□ 0.44
MBD4-202ENST00000393278 SLC10A7Q0GE19 358 aa17.82■□□□□ 0.44
MBD4-202ENST00000393278 ZNF177Q13360 481 aaPredicted RBP17.82■□□□□ 0.44
MBD4-202ENST00000393278 EFTUD2Q15029 972 aaKnown RBP eCLIP17.82■□□□□ 0.442e-13■□□□□ 11.3
MBD4-202ENST00000393278 TERF2Q15554 542 aa17.82■□□□□ 0.44
MBD4-202ENST00000393278 NAPEPLDQ6IQ20 393 aa17.82■□□□□ 0.44
MBD4-202ENST00000393278 UNC5AQ6ZN44 842 aa17.82■□□□□ 0.44
MBD4-202ENST00000393278 CCNJLQ8IV13 435 aa17.82■□□□□ 0.44
MBD4-202ENST00000393278 SPATA22Q8NHS9 363 aa17.82■□□□□ 0.44
MBD4-202ENST00000393278 ARNTL2Q8WYA1 636 aa17.82■□□□□ 0.44
MBD4-202ENST00000393278 CYTH2Q99418 400 aa17.82■□□□□ 0.44
MBD4-202ENST00000393278 DHRS4Q9BTZ2 278 aa17.82■□□□□ 0.44
MBD4-202ENST00000393278 PDFQ9HBH1 243 aa17.82■□□□□ 0.44
MBD4-202ENST00000393278 DNMT3BQ9UBC3 853 aaKnown RBP17.82■□□□□ 0.44
MBD4-202ENST00000393278 TBC1D30Q9Y2I9 924 aa17.82■□□□□ 0.44
MBD4-202ENST00000393278 SCAMP3O14828 347 aaKnown RBP17.81■□□□□ 0.44
MBD4-202ENST00000393278 MT-CYBP00156 380 aaPredicted RBP17.81■□□□□ 0.44
MBD4-202ENST00000393278 RHOP08100 348 aa17.81■□□□□ 0.44
MBD4-202ENST00000393278 RHOCP08134 193 aa17.81■□□□□ 0.44
MBD4-202ENST00000393278 DDX6P26196 483 aaKnown RBP eCLIP17.81■□□□□ 0.441e-5■■■□□ 17.8
MBD4-202ENST00000393278 HOXD9P28356 352 aaPredicted RBP17.81■□□□□ 0.44
MBD4-202ENST00000393278 ATP1A2P50993 1020 aa17.81■□□□□ 0.44
MBD4-202ENST00000393278 STEAP4Q687X5 459 aa17.81■□□□□ 0.44
MBD4-202ENST00000393278 HTR3DQ70Z44 454 aa17.81■□□□□ 0.44
MBD4-202ENST00000393278 LINC00523Q86TU6 105 aa17.81■□□□□ 0.44
MBD4-202ENST00000393278 EXOC3L1Q86VI1 746 aa17.81■□□□□ 0.44
MBD4-202ENST00000393278 CYP4X1Q8N118 509 aa17.81■□□□□ 0.44
MBD4-202ENST00000393278 LEMD2Q8NC56 503 aa17.81■□□□□ 0.44
MBD4-202ENST00000393278 HJURPQ8NCD3 748 aaPredicted RBP17.81■□□□□ 0.44
MBD4-202ENST00000393278 OR7D4Q8NG98 312 aa17.81■□□□□ 0.44
MBD4-202ENST00000393278 GSDMBQ8TAX9 411 aa17.81■□□□□ 0.44
MBD4-202ENST00000393278 ZNF599Q96NL3 588 aa17.81■□□□□ 0.44
MBD4-202ENST00000393278 NAT9Q9BTE0 207 aa17.81■□□□□ 0.44
MBD4-202ENST00000393278 SLC25A51Q9H1U9 297 aa17.81■□□□□ 0.44
MBD4-202ENST00000393278 SYBUQ9NX95 663 aa17.81■□□□□ 0.44
MBD4-202ENST00000393278 PSD3Q9NYI0 1048 aa17.81■□□□□ 0.44
MBD4-202ENST00000393278 CFAP97Q9P2B7 532 aa17.81■□□□□ 0.44
MBD4-202ENST00000393278 PSMC3IPQ9P2W1 217 aaPredicted RBP17.81■□□□□ 0.44
MBD4-202ENST00000393278 TBK1Q9UHD2 729 aa17.81■□□□□ 0.44
MBD4-202ENST00000393278 ZNF510Q9Y2H8 683 aa17.81■□□□□ 0.44
MBD4-202ENST00000393278 SH3BP1Q9Y3L3 701 aa17.81■□□□□ 0.44
MBD4-202ENST00000393278 CHD9Q3L8U1 2897 aa17.81■□□□□ 0.44
MBD4-202ENST00000393278 AP3B1O00203 1094 aa17.8■□□□□ 0.44
MBD4-202ENST00000393278 PER2O15055 1255 aa17.8■□□□□ 0.44
MBD4-202ENST00000393278 XYLBO75191 536 aa17.8■□□□□ 0.44
MBD4-202ENST00000393278 MOSPD3O75425 235 aa17.8■□□□□ 0.44
MBD4-202ENST00000393278 C1QAP02745 245 aa17.8■□□□□ 0.44
MBD4-202ENST00000393278 PRKCHP24723 683 aa17.8■□□□□ 0.44
MBD4-202ENST00000393278 PBX2P40425 430 aa17.8■□□□□ 0.44
MBD4-202ENST00000393278 CRADDP78560 199 aa17.8■□□□□ 0.44
MBD4-202ENST00000393278 LBRQ14739 615 aaKnown RBP17.8■□□□□ 0.44
MBD4-202ENST00000393278 TMED2Q15363 201 aa17.8■□□□□ 0.44
MBD4-202ENST00000393278 GPR158Q5T848 1215 aa17.8■□□□□ 0.44
MBD4-202ENST00000393278 TMCO4Q5TGY1 634 aa17.8■□□□□ 0.44
MBD4-202ENST00000393278 CXorf57Q6NSI4 855 aaKnown RBP17.8■□□□□ 0.44
MBD4-202ENST00000393278 CASC4Q6P4E1 433 aa17.8■□□□□ 0.44
MBD4-202ENST00000393278 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.8■□□□□ 0.44
MBD4-202ENST00000393278 DNAAF3Q8N9W5 541 aa17.8■□□□□ 0.44
MBD4-202ENST00000393278 TCEAL4Q96EI5 215 aa17.8■□□□□ 0.44
MBD4-202ENST00000393278 PAFAH2Q99487 392 aa17.8■□□□□ 0.44
MBD4-202ENST00000393278 TRIM56Q9BRZ2 755 aaKnown RBP17.8■□□□□ 0.44
MBD4-202ENST00000393278 NT5MQ9NPB1 228 aa17.8■□□□□ 0.44
MBD4-202ENST00000393278 ZDHHC7Q9NXF8 308 aa17.8■□□□□ 0.44
MBD4-202ENST00000393278 BFARQ9NZS9 450 aa17.8■□□□□ 0.44
MBD4-202ENST00000393278 DPP7Q9UHL4 492 aa17.8■□□□□ 0.44
MBD4-202ENST00000393278 ARHGAP26Q9UNA1 814 aa17.8■□□□□ 0.44
MBD4-202ENST00000393278 TBL1XO60907 577 aa17.8■□□□□ 0.44
MBD4-202ENST00000393278 POU2F2P09086 479 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms