RNA–Protein interactions for RNA: ENST00000392824.8

CSHL1-204, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSHL1, Length 823 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-204ENST00000392824 SCML1Q9UN30 329 aa16.45■□□□□ 0.22
CSHL1-204ENST00000392824 TFR2Q9UP52 801 aa16.45■□□□□ 0.22
CSHL1-204ENST00000392824 NCKAP1Q9Y2A7 1128 aa16.45■□□□□ 0.22
CSHL1-204ENST00000392824 PRR23AA6NEV1 266 aa16.44■□□□□ 0.22
CSHL1-204ENST00000392824 SMAD6O43541 496 aaKnown RBP16.44■□□□□ 0.22
CSHL1-204ENST00000392824 NRDCO43847 1150 aa16.44■□□□□ 0.22
CSHL1-204ENST00000392824 GFRA3O60609 400 aa16.44■□□□□ 0.22
CSHL1-204ENST00000392824 NDUFS2O75306 463 aa16.44■□□□□ 0.22
CSHL1-204ENST00000392824 TNNT1P13805 278 aa16.44■□□□□ 0.22
CSHL1-204ENST00000392824 VAV1P15498 845 aa16.44■□□□□ 0.22
CSHL1-204ENST00000392824 AMPD1P23109 780 aa16.44■□□□□ 0.22
CSHL1-204ENST00000392824 SERPINH1P50454 418 aaKnown RBP16.44■□□□□ 0.22
CSHL1-204ENST00000392824 DNA2P51530 1060 aa16.44■□□□□ 0.22
CSHL1-204ENST00000392824 TPMTP51580 245 aa16.44■□□□□ 0.22
CSHL1-204ENST00000392824 VAV2P52735 878 aa16.44■□□□□ 0.22
CSHL1-204ENST00000392824 ARF5P84085 180 aa16.44■□□□□ 0.22
CSHL1-204ENST00000392824 SERINC3Q13530 473 aa16.44■□□□□ 0.22
CSHL1-204ENST00000392824 DPYSQ14117 519 aa16.44■□□□□ 0.22
CSHL1-204ENST00000392824 PLK5Q496M5 336 aa16.44■□□□□ 0.22
CSHL1-204ENST00000392824 TMCO3Q6UWJ1 677 aa16.44■□□□□ 0.22
CSHL1-204ENST00000392824 Q6ZVU0 165 aa16.44■□□□□ 0.22
CSHL1-204ENST00000392824 LPCAT2Q7L5N7 544 aa16.44■□□□□ 0.22
CSHL1-204ENST00000392824 ASCL5Q7RTU5 278 aa16.44■□□□□ 0.22
CSHL1-204ENST00000392824 MMAAQ8IVH4 418 aaKnown RBP16.44■□□□□ 0.22
CSHL1-204ENST00000392824 FAM160A2Q8N612 972 aaPredicted RBP16.44■□□□□ 0.22
CSHL1-204ENST00000392824 CCDC112Q8NEF3 446 aa16.44■□□□□ 0.22
CSHL1-204ENST00000392824 ANP32BQ92688 251 aaKnown RBP16.44■□□□□ 0.22
CSHL1-204ENST00000392824 ZC3H10Q96K80 434 aaKnown RBP16.44■□□□□ 0.22
CSHL1-204ENST00000392824 FAM129BQ96TA1 746 aa16.44■□□□□ 0.22
CSHL1-204ENST00000392824 CEP44Q9C0F1 390 aa16.44■□□□□ 0.22
CSHL1-204ENST00000392824 LRRC19Q9H756 370 aa16.44■□□□□ 0.22
CSHL1-204ENST00000392824 NCDNQ9UBB6 729 aa16.44■□□□□ 0.22
CSHL1-204ENST00000392824 IGHV1OR15-9A0A0B4J2B8 117 aa16.43■□□□□ 0.22
CSHL1-204ENST00000392824 DFFAO00273 331 aa16.43■□□□□ 0.22
CSHL1-204ENST00000392824 MCF2LO15068 1137 aa16.43■□□□□ 0.22
CSHL1-204ENST00000392824 BUB1BO60566 1050 aaPredicted RBP16.43■□□□□ 0.22
CSHL1-204ENST00000392824 IL1BP01584 269 aa16.43■□□□□ 0.22
CSHL1-204ENST00000392824 BCKDHBP21953 392 aa16.43■□□□□ 0.22
CSHL1-204ENST00000392824 COMTP21964 271 aa16.43■□□□□ 0.22
CSHL1-204ENST00000392824 CD6P30203 668 aa16.43■□□□□ 0.22
CSHL1-204ENST00000392824 SLC8A1P32418 973 aa16.43■□□□□ 0.22
CSHL1-204ENST00000392824 MRE11P49959 708 aa16.43■□□□□ 0.22
CSHL1-204ENST00000392824 PAPOLAP51003 745 aaKnown RBP16.43■□□□□ 0.22
CSHL1-204ENST00000392824 RPL6Q02878 288 aaKnown RBP16.43■□□□□ 0.22
CSHL1-204ENST00000392824 KIF5AQ12840 1032 aa16.43■□□□□ 0.22
CSHL1-204ENST00000392824 CST6Q15828 149 aa16.43■□□□□ 0.22
CSHL1-204ENST00000392824 LRRC38Q5VT99 294 aa16.43■□□□□ 0.22
CSHL1-204ENST00000392824 FAM46CQ5VWP2 391 aa16.43■□□□□ 0.22
CSHL1-204ENST00000392824 C22orf39Q6P5X5 142 aa16.43■□□□□ 0.22
CSHL1-204ENST00000392824 LEKR1Q6ZMV7 388 aa16.43■□□□□ 0.22
CSHL1-204ENST00000392824 RHOT1Q8IXI2 618 aa16.43■□□□□ 0.22
CSHL1-204ENST00000392824 PCDH20Q8N6Y1 951 aaKnown RBP16.43■□□□□ 0.22
CSHL1-204ENST00000392824 FRMD1Q8N878 549 aa16.43■□□□□ 0.22
CSHL1-204ENST00000392824 CASKIN2Q8WXE0 1202 aa16.43■□□□□ 0.22
CSHL1-204ENST00000392824 LOXL4Q96JB6 756 aa16.43■□□□□ 0.22
CSHL1-204ENST00000392824 SLC39A8Q9C0K1 460 aa16.43■□□□□ 0.22
CSHL1-204ENST00000392824 DUSP15Q9H1R2 295 aaPredicted RBP16.43■□□□□ 0.22
CSHL1-204ENST00000392824 TNKS2Q9H2K2 1166 aa16.43■□□□□ 0.22
CSHL1-204ENST00000392824 USP36Q9P275 1121 aaKnown RBP16.43■□□□□ 0.22
CSHL1-204ENST00000392824 FCF1Q9Y324 198 aaKnown RBP16.43■□□□□ 0.22
CSHL1-204ENST00000392824 REXO2Q9Y3B8 237 aaKnown RBP16.43■□□□□ 0.22
CSHL1-204ENST00000392824 ALG6Q9Y672 507 aa16.43■□□□□ 0.22
CSHL1-204ENST00000392824 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.42■□□□□ 0.22
CSHL1-204ENST00000392824 RCCD1A6NED2 376 aa16.42■□□□□ 0.22
CSHL1-204ENST00000392824 BTNL10A8MVZ5 291 aa16.42■□□□□ 0.22
CSHL1-204ENST00000392824 ALOX15BO15296 676 aa16.42■□□□□ 0.22
CSHL1-204ENST00000392824 ADH1BP00325 375 aa16.42■□□□□ 0.22
CSHL1-204ENST00000392824 RETP07949 1114 aa16.42■□□□□ 0.22
CSHL1-204ENST00000392824 CD48P09326 243 aa16.42■□□□□ 0.22
CSHL1-204ENST00000392824 IL4RP24394 825 aa16.42■□□□□ 0.22
CSHL1-204ENST00000392824 SERPINB6P35237 376 aa16.42■□□□□ 0.22
CSHL1-204ENST00000392824 PSMD8P48556 350 aa16.42■□□□□ 0.22
CSHL1-204ENST00000392824 ARSEP51690 589 aa16.42■□□□□ 0.22
CSHL1-204ENST00000392824 MMRN1Q13201 1228 aa16.42■□□□□ 0.22
CSHL1-204ENST00000392824 DPYSL3Q14195 570 aa16.42■□□□□ 0.22
CSHL1-204ENST00000392824 INO80DQ53TQ3 878 aaPredicted RBP16.42■□□□□ 0.22
CSHL1-204ENST00000392824 SPDYCQ5MJ68 293 aa16.42■□□□□ 0.22
CSHL1-204ENST00000392824 DAAM2Q86T65 1068 aa16.42■□□□□ 0.22
CSHL1-204ENST00000392824 FAM124AQ86V42 546 aa16.42■□□□□ 0.22
CSHL1-204ENST00000392824 ALYREFQ86V81 257 aaKnown RBP16.42■□□□□ 0.22
CSHL1-204ENST00000392824 TMEFF1Q8IYR6 380 aa16.42■□□□□ 0.22
CSHL1-204ENST00000392824 FAM71BQ8TC56 605 aa16.42■□□□□ 0.22
CSHL1-204ENST00000392824 TSC1Q92574 1164 aa16.42■□□□□ 0.22
CSHL1-204ENST00000392824 RUBCNQ92622 972 aa16.42■□□□□ 0.22
CSHL1-204ENST00000392824 ISG20Q96AZ6 181 aaKnown RBP16.42■□□□□ 0.22
CSHL1-204ENST00000392824 TOE1Q96GM8 510 aaKnown RBP16.42■□□□□ 0.22
CSHL1-204ENST00000392824 OMDQ99983 421 aa16.42■□□□□ 0.22
CSHL1-204ENST00000392824 ZNF670Q9BS34 389 aa16.42■□□□□ 0.22
CSHL1-204ENST00000392824 DESI2Q9BSY9 194 aa16.42■□□□□ 0.22
CSHL1-204ENST00000392824 MAK16Q9BXY0 300 aaKnown RBP16.42■□□□□ 0.22
CSHL1-204ENST00000392824 PABPC3Q9H361 631 aaKnown RBP16.42■□□□□ 0.22
CSHL1-204ENST00000392824 KLHL11Q9NVR0 708 aa16.42■□□□□ 0.22
CSHL1-204ENST00000392824 FBXL12Q9NXK8 326 aa16.42■□□□□ 0.22
CSHL1-204ENST00000392824 DDX56Q9NY93 547 aaKnown RBP16.42■□□□□ 0.22
CSHL1-204ENST00000392824 MBD1Q9UIS9 605 aaPredicted RBP16.42■□□□□ 0.22
CSHL1-204ENST00000392824 HYOU1Q9Y4L1 999 aa16.42■□□□□ 0.22
CSHL1-204ENST00000392824 GPR179Q6PRD1 2367 aa16.42■□□□□ 0.22
CSHL1-204ENST00000392824 PIEZO1Q92508 2521 aa16.41■□□□□ 0.22
CSHL1-204ENST00000392824 LRRD1A4D1F6 860 aa16.41■□□□□ 0.22
CSHL1-204ENST00000392824 C1QTNF3-AMACRE9PGA6 284 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms