RNA–Protein interactions for RNA: ENST00000392557.8

BRF1-204, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-204ENST00000392557 CD52P31358 61 aa11.05□□□□□ -0.64
BRF1-204ENST00000392557 PCLAFQ15004 111 aa11.05□□□□□ -0.64
BRF1-204ENST00000392557 MFSD14CQ5VZR4 134 aa11.05□□□□□ -0.64
BRF1-204ENST00000392557 ALKAL1Q6UXT8 129 aa11.05□□□□□ -0.64
BRF1-204ENST00000392557 KDELC2Q7Z4H8 507 aa11.05□□□□□ -0.64
BRF1-204ENST00000392557 TMEM110Q86TL2 294 aa11.05□□□□□ -0.64
BRF1-204ENST00000392557 DCLK2Q8N568 766 aa11.05□□□□□ -0.64
BRF1-204ENST00000392557 TRIML2Q8N7C3 387 aa11.05□□□□□ -0.64
BRF1-204ENST00000392557 SENP8Q96LD8 212 aa11.05□□□□□ -0.64
BRF1-204ENST00000392557 MTG1Q9BT17 334 aaPredicted RBP11.05□□□□□ -0.64
BRF1-204ENST00000392557 SEMA6AQ9H2E6 1030 aa11.05□□□□□ -0.64
BRF1-204ENST00000392557 HAS3O00219 553 aa11.05□□□□□ -0.64
BRF1-204ENST00000392557 XPO1O14980 1071 aaKnown RBP11.05□□□□□ -0.64
BRF1-204ENST00000392557 STAU1O95793 577 aaKnown RBP11.05□□□□□ -0.64
BRF1-204ENST00000392557 CPOXP36551 454 aa11.05□□□□□ -0.64
BRF1-204ENST00000392557 PNPLA4P41247 253 aa11.05□□□□□ -0.64
BRF1-204ENST00000392557 ADAM17P78536 824 aa11.05□□□□□ -0.64
BRF1-204ENST00000392557 ANKRD20A4Q4UJ75 823 aa11.05□□□□□ -0.64
BRF1-204ENST00000392557 KHSRPQ92945 711 aaKnown RBP eCLIP11.05□□□□□ -0.64
BRF1-204ENST00000392557 EME1Q96AY2 570 aa11.05□□□□□ -0.64
BRF1-204ENST00000392557 OR52B2Q96RD2 323 aa11.05□□□□□ -0.64
BRF1-204ENST00000392557 RHOBTB2Q9BYZ6 727 aa11.05□□□□□ -0.64
BRF1-204ENST00000392557 FAM96AQ9H5X1 160 aa11.05□□□□□ -0.64
BRF1-204ENST00000392557 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.05□□□□□ -0.64
BRF1-204ENST00000392557 BFARQ9NZS9 450 aa11.05□□□□□ -0.64
BRF1-204ENST00000392557 SORCS3Q9UPU3 1222 aa11.05□□□□□ -0.64
BRF1-204ENST00000392557 THP07101 528 aa11.04□□□□□ -0.64
BRF1-204ENST00000392557 ZFXP17010 805 aaPredicted RBP11.04□□□□□ -0.64
BRF1-204ENST00000392557 PTPN1P18031 435 aaKnown RBP11.04□□□□□ -0.64
BRF1-204ENST00000392557 FGFR3P22607 806 aa11.04□□□□□ -0.64
BRF1-204ENST00000392557 CNTFP26441 200 aa11.04□□□□□ -0.64
BRF1-204ENST00000392557 CCR10P46092 362 aa11.04□□□□□ -0.64
BRF1-204ENST00000392557 PRKCZQ05513 592 aa11.04□□□□□ -0.64
BRF1-204ENST00000392557 KLF10Q13118 480 aa11.04□□□□□ -0.64
BRF1-204ENST00000392557 C6orf52Q5T4I8 152 aa11.04□□□□□ -0.64
BRF1-204ENST00000392557 TAF2Q6P1X5 1199 aa11.04□□□□□ -0.64
BRF1-204ENST00000392557 LAYNQ6UX15 382 aa11.04□□□□□ -0.64
BRF1-204ENST00000392557 CYP4V2Q6ZWL3 525 aaPredicted RBP11.04□□□□□ -0.64
BRF1-204ENST00000392557 RNF135Q8IUD6 432 aa11.04□□□□□ -0.64
BRF1-204ENST00000392557 SPATA6LQ8N4H0 392 aa11.04□□□□□ -0.64
BRF1-204ENST00000392557 BHLHE22Q8NFJ8 381 aaPredicted RBP11.04□□□□□ -0.64
BRF1-204ENST00000392557 DCUN1D1Q96GG9 259 aa11.04□□□□□ -0.64
BRF1-204ENST00000392557 AGAP2Q99490 1192 aa11.04□□□□□ -0.64
BRF1-204ENST00000392557 ILKAPQ9H0C8 392 aaPredicted RBP11.04□□□□□ -0.64
BRF1-204ENST00000392557 C1orf21Q9H246 121 aa11.04□□□□□ -0.64
BRF1-204ENST00000392557 MIOSQ9NXC5 875 aa11.04□□□□□ -0.64
BRF1-204ENST00000392557 GTSE1Q9NYZ3 720 aa11.04□□□□□ -0.64
BRF1-204ENST00000392557 LZTS1Q9Y250 596 aa11.04□□□□□ -0.64
BRF1-204ENST00000392557 COMMD3-BMI1R4GMX3 469 aa11.04□□□□□ -0.64
BRF1-204ENST00000392557 STX16-NPEPL1H3BU86 382 aa11.04□□□□□ -0.64
BRF1-204ENST00000392557 M0QYT0 321 aa11.04□□□□□ -0.64
BRF1-204ENST00000392557 DUSP11O75319 330 aaKnown RBP11.04□□□□□ -0.64
BRF1-204ENST00000392557 B3GAT3O94766 335 aa11.04□□□□□ -0.64
BRF1-204ENST00000392557 MPSTP25325 297 aa11.04□□□□□ -0.64
BRF1-204ENST00000392557 SPRP35270 261 aaPredicted RBP11.04□□□□□ -0.64
BRF1-204ENST00000392557 GP5P40197 560 aa11.04□□□□□ -0.64
BRF1-204ENST00000392557 TKTL1P51854 596 aa11.04□□□□□ -0.64
BRF1-204ENST00000392557 IRF9Q00978 393 aa11.04□□□□□ -0.64
BRF1-204ENST00000392557 PKDCCQ504Y2 493 aa11.04□□□□□ -0.64
BRF1-204ENST00000392557 TMEM198Q66K66 360 aa11.04□□□□□ -0.64
BRF1-204ENST00000392557 KYQ8NBH2 561 aa11.04□□□□□ -0.64
BRF1-204ENST00000392557 RCN3Q96D15 328 aa11.04□□□□□ -0.64
BRF1-204ENST00000392557 CSPG4P5Q96PW8 444 aa11.04□□□□□ -0.64
BRF1-204ENST00000392557 PHF12Q96QT6 1004 aa11.04□□□□□ -0.64
BRF1-204ENST00000392557 MRPL1Q9BYD6 325 aaKnown RBP11.04□□□□□ -0.64
BRF1-204ENST00000392557 DNAI2Q9GZS0 605 aa11.04□□□□□ -0.64
BRF1-204ENST00000392557 TRPV6Q9H1D0 765 aa11.04□□□□□ -0.64
BRF1-204ENST00000392557 OCEL1Q9H607 264 aa11.04□□□□□ -0.64
BRF1-204ENST00000392557 AGO3Q9H9G7 860 aaKnown RBP11.04□□□□□ -0.64
BRF1-204ENST00000392557 DTLQ9NZJ0 730 aa11.04□□□□□ -0.64
BRF1-204ENST00000392557 TRPV2Q9Y5S1 764 aa11.04□□□□□ -0.64
BRF1-204ENST00000392557 PHGDHO43175 533 aaKnown RBP11.03□□□□□ -0.64
BRF1-204ENST00000392557 BUD23O43709 281 aaKnown RBP11.03□□□□□ -0.64
BRF1-204ENST00000392557 CSPG5O95196 566 aa11.03□□□□□ -0.64
BRF1-204ENST00000392557 MT-CO1P00395 513 aa11.03□□□□□ -0.64
BRF1-204ENST00000392557 CHRNGP07510 517 aa11.03□□□□□ -0.64
BRF1-204ENST00000392557 SETSIPP0DME0 302 aa11.03□□□□□ -0.64
BRF1-204ENST00000392557 FDFT1P37268 417 aa11.03□□□□□ -0.64
BRF1-204ENST00000392557 NAGLUP54802 743 aa11.03□□□□□ -0.64
BRF1-204ENST00000392557 TAZQ16635 292 aa11.03□□□□□ -0.64
BRF1-204ENST00000392557 PAOXQ6QHF9 649 aa11.03□□□□□ -0.64
BRF1-204ENST00000392557 BNC2Q6ZN30 1099 aaPredicted RBP11.03□□□□□ -0.64
BRF1-204ENST00000392557 PLD6Q8N2A8 252 aaKnown RBP11.03□□□□□ -0.64
BRF1-204ENST00000392557 MCUQ8NE86 351 aa11.03□□□□□ -0.64
BRF1-204ENST00000392557 EDEM1Q92611 657 aa11.03□□□□□ -0.64
BRF1-204ENST00000392557 APBB2Q92870 758 aa11.03□□□□□ -0.64
BRF1-204ENST00000392557 IFT43Q96FT9 208 aa11.03□□□□□ -0.64
BRF1-204ENST00000392557 ZNF670Q9BS34 389 aa11.03□□□□□ -0.64
BRF1-204ENST00000392557 IARS2Q9NSE4 1012 aaKnown RBP11.03□□□□□ -0.64
BRF1-204ENST00000392557 UNC80Q8N2C7 3258 aa11.03□□□□□ -0.64
BRF1-204ENST00000392557 A0A0A0MRY4 1105 aa11.03□□□□□ -0.64
BRF1-204ENST00000392557 MYBPHLA2RUH7 354 aa11.03□□□□□ -0.64
BRF1-204ENST00000392557 ZBTB14O43829 449 aa11.03□□□□□ -0.64
BRF1-204ENST00000392557 ASGR1P07306 291 aa11.03□□□□□ -0.64
BRF1-204ENST00000392557 PGAM1P18669 254 aa11.03□□□□□ -0.64
BRF1-204ENST00000392557 FCGRTP55899 365 aa11.03□□□□□ -0.64
BRF1-204ENST00000392557 CYLC2Q14093 348 aaPredicted RBP11.03□□□□□ -0.64
BRF1-204ENST00000392557 KRT80Q6KB66 452 aa11.03□□□□□ -0.64
BRF1-204ENST00000392557 HFE2Q6ZVN8 426 aa11.03□□□□□ -0.64
BRF1-204ENST00000392557 PQLC1Q8N2U9 271 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms