RNA–Protein interactions for RNA: ENST00000390990.1

RNU6-239P-201, Transcript of RNA, U6 small nuclear 239, pseudogene, humanhuman

BASIC

Gene RNU6-239P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-239P-201ENST00000390990 LRFN1Q9P244 771 aa1.5□□□□□ -2.17
RNU6-239P-201ENST00000390990 FNIP2Q9P278 1114 aa1.5□□□□□ -2.17
RNU6-239P-201ENST00000390990 PNMA8BQ9ULN7 279 aaPredicted RBP1.5□□□□□ -2.17
RNU6-239P-201ENST00000390990 UBE2J1Q9Y385 318 aaPredicted RBP1.5□□□□□ -2.17
RNU6-239P-201ENST00000390990 PRSS21Q9Y6M0 314 aa1.5□□□□□ -2.17
RNU6-239P-201ENST00000390990 GREB1LQ9C091 1923 aaPredicted RBP1.5□□□□□ -2.17
RNU6-239P-201ENST00000390990 ADAMTS9Q9P2N4 1935 aa1.5□□□□□ -2.17
RNU6-239P-201ENST00000390990 GXYLT2A0PJZ3 443 aa1.49□□□□□ -2.17
RNU6-239P-201ENST00000390990 CTNND1O60716 968 aaKnown RBP1.49□□□□□ -2.17
RNU6-239P-201ENST00000390990 CLDN7O95471 211 aa1.49□□□□□ -2.17
RNU6-239P-201ENST00000390990 WEE2P0C1S8 567 aa1.49□□□□□ -2.17
RNU6-239P-201ENST00000390990 CETPP11597 493 aa1.49□□□□□ -2.17
RNU6-239P-201ENST00000390990 MYF5P13349 255 aa1.49□□□□□ -2.17
RNU6-239P-201ENST00000390990 NR1D1P20393 614 aa1.49□□□□□ -2.17
RNU6-239P-201ENST00000390990 TYK2P29597 1187 aa1.49□□□□□ -2.17
RNU6-239P-201ENST00000390990 NEK2P51955 445 aa1.49□□□□□ -2.17
RNU6-239P-201ENST00000390990 FUT6P51993 359 aa1.49□□□□□ -2.17
RNU6-239P-201ENST00000390990 FOXL2P58012 376 aa1.49□□□□□ -2.17
RNU6-239P-201ENST00000390990 SREBF2Q12772 1141 aa1.49□□□□□ -2.17
RNU6-239P-201ENST00000390990 ARHGAP15Q53QZ3 475 aa1.49□□□□□ -2.17
RNU6-239P-201ENST00000390990 RAP1GAP2Q684P5 730 aa1.49□□□□□ -2.17
RNU6-239P-201ENST00000390990 MRNIPQ6NTE8 343 aa1.49□□□□□ -2.17
RNU6-239P-201ENST00000390990 KIAA0408Q6ZU52 694 aa1.49□□□□□ -2.17
RNU6-239P-201ENST00000390990 EPM2AIP1Q7L775 607 aaPredicted RBP1.49□□□□□ -2.17
RNU6-239P-201ENST00000390990 OR13A1Q8NGR1 328 aa1.49□□□□□ -2.17
RNU6-239P-201ENST00000390990 FAM110DQ8TAY7 271 aaPredicted RBP1.49□□□□□ -2.17
RNU6-239P-201ENST00000390990 DEPTORQ8TB45 409 aa1.49□□□□□ -2.17
RNU6-239P-201ENST00000390990 MCRS1Q96EZ8 462 aa1.49□□□□□ -2.17
RNU6-239P-201ENST00000390990 APIPQ96GX9 242 aa1.49□□□□□ -2.17
RNU6-239P-201ENST00000390990 NUDT22Q9BRQ3 303 aa1.49□□□□□ -2.17
RNU6-239P-201ENST00000390990 CDK19Q9BWU1 502 aa1.49□□□□□ -2.17
RNU6-239P-201ENST00000390990 FSCN3Q9NQT6 498 aa1.49□□□□□ -2.17
RNU6-239P-201ENST00000390990 PAK5Q9P286 719 aa1.49□□□□□ -2.17
RNU6-239P-201ENST00000390990 KDM4EB2RXH2 506 aaPredicted RBP1.48□□□□□ -2.17
RNU6-239P-201ENST00000390990 C16orf97H3BN30 126 aa1.48□□□□□ -2.17
RNU6-239P-201ENST00000390990 NKX2-8O15522 239 aa1.48□□□□□ -2.17
RNU6-239P-201ENST00000390990 CH25HO95992 272 aa1.48□□□□□ -2.17
RNU6-239P-201ENST00000390990 ALDOAP04075 364 aaKnown RBP1.48□□□□□ -2.17
RNU6-239P-201ENST00000390990 ANXA2P07355 339 aaKnown RBP1.48□□□□□ -2.17
RNU6-239P-201ENST00000390990 ITGA5P08648 1049 aa1.48□□□□□ -2.17
RNU6-239P-201ENST00000390990 ENO3P13929 434 aaPredicted RBP1.48□□□□□ -2.17
RNU6-239P-201ENST00000390990 BRWD1-AS2P59051 145 aa1.48□□□□□ -2.17
RNU6-239P-201ENST00000390990 TAS2R50P59544 299 aa1.48□□□□□ -2.17
RNU6-239P-201ENST00000390990 AAK1Q2M2I8 961 aa1.48□□□□□ -2.17
RNU6-239P-201ENST00000390990 PLK5Q496M5 336 aa1.48□□□□□ -2.17
RNU6-239P-201ENST00000390990 BRDTQ58F21 947 aaPredicted RBP1.48□□□□□ -2.17
RNU6-239P-201ENST00000390990 TMEM88Q6PEY1 159 aa1.48□□□□□ -2.17
RNU6-239P-201ENST00000390990 STXBP4Q6ZWJ1 553 aa1.48□□□□□ -2.17
RNU6-239P-201ENST00000390990 ADAD2Q8NCV1 583 aaKnown RBP1.48□□□□□ -2.17
RNU6-239P-201ENST00000390990 ZNF248Q8NDW4 579 aa1.48□□□□□ -2.17
RNU6-239P-201ENST00000390990 CADM4Q8NFZ8 388 aa1.48□□□□□ -2.17
RNU6-239P-201ENST00000390990 PJA1Q8NG27 643 aa1.48□□□□□ -2.17
RNU6-239P-201ENST00000390990 GPT2Q8TD30 523 aa1.48□□□□□ -2.17
RNU6-239P-201ENST00000390990 GRAMD1AQ96CP6 724 aa1.48□□□□□ -2.17
RNU6-239P-201ENST00000390990 LGALS12Q96DT0 336 aa1.48□□□□□ -2.17
RNU6-239P-201ENST00000390990 LRRC46Q96FV0 321 aa1.48□□□□□ -2.17
RNU6-239P-201ENST00000390990 FAR2Q96K12 515 aa1.48□□□□□ -2.17
RNU6-239P-201ENST00000390990 PAAF1Q9BRP4 392 aa1.48□□□□□ -2.17
RNU6-239P-201ENST00000390990 UBXN6Q9BZV1 441 aa1.48□□□□□ -2.17
RNU6-239P-201ENST00000390990 LRRC27Q9C0I9 530 aa1.48□□□□□ -2.17
RNU6-239P-201ENST00000390990 CLK4Q9HAZ1 481 aaKnown RBP1.48□□□□□ -2.17
RNU6-239P-201ENST00000390990 CCDC177Q9NQR7 707 aaPredicted RBP1.48□□□□□ -2.17
RNU6-239P-201ENST00000390990 ARL15Q9NXU5 204 aa1.48□□□□□ -2.17
RNU6-239P-201ENST00000390990 CDH22Q9UJ99 828 aa1.48□□□□□ -2.17
RNU6-239P-201ENST00000390990 ZMYND8Q9ULU4 1186 aaPredicted RBP1.48□□□□□ -2.17
RNU6-239P-201ENST00000390990 KCNK7Q9Y2U2 307 aa1.48□□□□□ -2.17
RNU6-239P-201ENST00000390990 ZNF318Q5VUA4 2279 aa1.47□□□□□ -2.17
RNU6-239P-201ENST00000390990 CYP3A7-CYP3A51PA0A087WV96 503 aa1.47□□□□□ -2.17
RNU6-239P-201ENST00000390990 LOC105369274A0A096LPK9 316 aa1.47□□□□□ -2.17
RNU6-239P-201ENST00000390990 LOC102723532A0A0G2JNH3 316 aa1.47□□□□□ -2.17
RNU6-239P-201ENST00000390990 A6NNZ2 444 aa1.47□□□□□ -2.17
RNU6-239P-201ENST00000390990 RASA4BC9J798 803 aa1.47□□□□□ -2.17
RNU6-239P-201ENST00000390990 TIMM23O14925 209 aa1.47□□□□□ -2.17
RNU6-239P-201ENST00000390990 TAF5LO75529 589 aa1.47□□□□□ -2.17
RNU6-239P-201ENST00000390990 TMCC1O94876 653 aa1.47□□□□□ -2.17
RNU6-239P-201ENST00000390990 KDM4BO94953 1096 aa1.47□□□□□ -2.17
RNU6-239P-201ENST00000390990 IGHV4-30-4P0DP06 118 aa1.47□□□□□ -2.17
RNU6-239P-201ENST00000390990 SLC5A1P13866 664 aa1.47□□□□□ -2.17
RNU6-239P-201ENST00000390990 PECAM1P16284 738 aaPredicted RBP1.47□□□□□ -2.17
RNU6-239P-201ENST00000390990 CYP3A7P24462 503 aa1.47□□□□□ -2.17
RNU6-239P-201ENST00000390990 FMO4P31512 558 aa1.47□□□□□ -2.17
RNU6-239P-201ENST00000390990 CYP2J2P51589 502 aa1.47□□□□□ -2.17
RNU6-239P-201ENST00000390990 LUMP51884 338 aaPredicted RBP1.47□□□□□ -2.17
RNU6-239P-201ENST00000390990 RPL15P61313 204 aaKnown RBP1.47□□□□□ -2.17
RNU6-239P-201ENST00000390990 CYP4A11Q02928 519 aa1.47□□□□□ -2.17
RNU6-239P-201ENST00000390990 POLD3Q15054 466 aaPredicted RBP1.47□□□□□ -2.17
RNU6-239P-201ENST00000390990 CALCRLQ16602 461 aa1.47□□□□□ -2.17
RNU6-239P-201ENST00000390990 VWA5B1Q5TIE3 1220 aa1.47□□□□□ -2.17
RNU6-239P-201ENST00000390990 FAM69BQ5VUD6 431 aa1.47□□□□□ -2.17
RNU6-239P-201ENST00000390990 SLC30A9Q6PML9 568 aa1.47□□□□□ -2.17
RNU6-239P-201ENST00000390990 SATL1Q86VE3 508 aa1.47□□□□□ -2.17
RNU6-239P-201ENST00000390990 TMEM200AQ86VY9 491 aa1.47□□□□□ -2.17
RNU6-239P-201ENST00000390990 OR4N4Q8N0Y3 316 aa1.47□□□□□ -2.17
RNU6-239P-201ENST00000390990 LRTOMTQ8WZ04 291 aa1.47□□□□□ -2.17
RNU6-239P-201ENST00000390990 TMEM18Q96B42 140 aa1.47□□□□□ -2.17
RNU6-239P-201ENST00000390990 SEL1LQ9UBV2 794 aa1.47□□□□□ -2.17
RNU6-239P-201ENST00000390990 RNF215Q9Y6U7 377 aa1.47□□□□□ -2.17
RNU6-239P-201ENST00000390990 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP1.46□□□□□ -2.18
RNU6-239P-201ENST00000390990 MBD3L5A6NJ08 208 aaPredicted RBP1.46□□□□□ -2.18
RNU6-239P-201ENST00000390990 PMS2P5A8MQ11 134 aa1.46□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms