RNA–Protein interactions for RNA: ENST00000380701.7

CCDC171-201, Transcript of coiled-coil domain containing 171, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC171, Length 6,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-201ENST00000380701 THTPAQ9BU02 230 aa7.27□□□□□ -1.25
CCDC171-201ENST00000380701 TRMOQ9BU70 441 aa7.27□□□□□ -1.25
CCDC171-201ENST00000380701 TTLL2Q9BWV7 592 aa7.27□□□□□ -1.25
CCDC171-201ENST00000380701 DUSP16Q9BY84 665 aa7.27□□□□□ -1.25
CCDC171-201ENST00000380701 B4GALT4O60513 344 aa7.27□□□□□ -1.25
CCDC171-201ENST00000380701 ALADP13716 330 aa7.27□□□□□ -1.25
CCDC171-201ENST00000380701 PTPN9P43378 593 aa7.27□□□□□ -1.25
CCDC171-201ENST00000380701 SLC12A3P55017 1021 aa7.27□□□□□ -1.25
CCDC171-201ENST00000380701 ACTR3P61158 418 aa7.27□□□□□ -1.25
CCDC171-201ENST00000380701 DMTNQ08495 405 aa7.27□□□□□ -1.25
CCDC171-201ENST00000380701 MTF1Q14872 753 aa7.27□□□□□ -1.25
CCDC171-201ENST00000380701 GALNTL6Q49A17 601 aa7.27□□□□□ -1.25
CCDC171-201ENST00000380701 RAET1GQ6H3X3 334 aa7.27□□□□□ -1.25
CCDC171-201ENST00000380701 IYDQ6PHW0 289 aa7.27□□□□□ -1.25
CCDC171-201ENST00000380701 PTF1AQ7RTS3 328 aa7.27□□□□□ -1.25
CCDC171-201ENST00000380701 ST13P5Q8NFI4 369 aaPredicted RBP7.27□□□□□ -1.25
CCDC171-201ENST00000380701 APOPT1Q96IL0 206 aa7.27□□□□□ -1.25
CCDC171-201ENST00000380701 PDGFDQ9GZP0 370 aaPredicted RBP7.27□□□□□ -1.25
CCDC171-201ENST00000380701 LHX5Q9H2C1 402 aa7.27□□□□□ -1.25
CCDC171-201ENST00000380701 TRPS1Q9UHF7 1281 aa7.27□□□□□ -1.25
CCDC171-201ENST00000380701 CORO1CQ9ULV4 474 aaPredicted RBP7.27□□□□□ -1.25
CCDC171-201ENST00000380701 CPSF4O95639 269 aaKnown RBP7.27□□□□□ -1.25
CCDC171-201ENST00000380701 LTA4HP09960 611 aaKnown RBP7.27□□□□□ -1.25
CCDC171-201ENST00000380701 VARSP26640 1264 aaKnown RBP7.27□□□□□ -1.25
CCDC171-201ENST00000380701 KCNJ1P48048 391 aa7.27□□□□□ -1.25
CCDC171-201ENST00000380701 PHYKPLQ8IUZ5 450 aa7.27□□□□□ -1.25
CCDC171-201ENST00000380701 CHPFQ8IZ52 775 aa7.27□□□□□ -1.25
CCDC171-201ENST00000380701 MIER2Q8N344 545 aa7.27□□□□□ -1.25
CCDC171-201ENST00000380701 VGLL2Q8N8G2 317 aa7.27□□□□□ -1.25
CCDC171-201ENST00000380701 MYLPFQ96A32 169 aa7.27□□□□□ -1.25
CCDC171-201ENST00000380701 S100A13Q99584 98 aa7.27□□□□□ -1.25
CCDC171-201ENST00000380701 COPS8Q99627 209 aa7.27□□□□□ -1.25
CCDC171-201ENST00000380701 HHATLQ9HCP6 504 aa7.27□□□□□ -1.25
CCDC171-201ENST00000380701 ALG13Q9NP73 1137 aaKnown RBP7.27□□□□□ -1.25
CCDC171-201ENST00000380701 PDP2Q9P2J9 529 aa7.27□□□□□ -1.25
CCDC171-201ENST00000380701 MORF4L1Q9UBU8 362 aa7.27□□□□□ -1.25
CCDC171-201ENST00000380701 NDUFAF1Q9Y375 327 aa7.27□□□□□ -1.25
CCDC171-201ENST00000380701 TIMM13Q9Y5L4 95 aaPredicted RBP7.27□□□□□ -1.25
CCDC171-201ENST00000380701 GNSP15586 552 aa7.26□□□□□ -1.25
CCDC171-201ENST00000380701 MIPP30301 263 aa7.26□□□□□ -1.25
CCDC171-201ENST00000380701 MATKP42679 507 aa7.26□□□□□ -1.25
CCDC171-201ENST00000380701 RPL21P46778 160 aaKnown RBP7.26□□□□□ -1.25
CCDC171-201ENST00000380701 MRPS35P82673 323 aaKnown RBP7.26□□□□□ -1.25
CCDC171-201ENST00000380701 GUCY1A3Q02108 690 aa7.26□□□□□ -1.25
CCDC171-201ENST00000380701 SHROOM1Q2M3G4 852 aaPredicted RBP7.26□□□□□ -1.25
CCDC171-201ENST00000380701 ANXA8L1Q5VT79 327 aa7.26□□□□□ -1.25
CCDC171-201ENST00000380701 GJB7Q6PEY0 223 aa7.26□□□□□ -1.25
CCDC171-201ENST00000380701 SLC47A2Q86VL8 602 aa7.26□□□□□ -1.25
CCDC171-201ENST00000380701 ELMO1Q92556 727 aa7.26□□□□□ -1.25
CCDC171-201ENST00000380701 CD101Q93033 1021 aa7.26□□□□□ -1.25
CCDC171-201ENST00000380701 PLD4Q96BZ4 506 aa7.26□□□□□ -1.25
CCDC171-201ENST00000380701 MED8Q96G25 268 aa7.26□□□□□ -1.25
CCDC171-201ENST00000380701 REXO5Q96IC2 774 aaKnown RBP7.26□□□□□ -1.25
CCDC171-201ENST00000380701 RAB11FIP5Q9BXF6 653 aa7.26□□□□□ -1.25
CCDC171-201ENST00000380701 ST6GALNAC4Q9H4F1 302 aa7.26□□□□□ -1.25
CCDC171-201ENST00000380701 ANGPT4Q9Y264 503 aa7.26□□□□□ -1.25
CCDC171-201ENST00000380701 TDRKHQ9Y2W6 561 aaKnown RBP7.26□□□□□ -1.25
CCDC171-201ENST00000380701 KLHL41O60662 606 aa7.26□□□□□ -1.25
CCDC171-201ENST00000380701 EPN2O95208 641 aa7.26□□□□□ -1.25
CCDC171-201ENST00000380701 ENO2P09104 434 aaPredicted RBP7.26□□□□□ -1.25
CCDC171-201ENST00000380701 IDSP22304 550 aa7.26□□□□□ -1.25
CCDC171-201ENST00000380701 RPIAP49247 311 aa7.26□□□□□ -1.25
CCDC171-201ENST00000380701 MARSP56192 900 aaKnown RBP7.26□□□□□ -1.25
CCDC171-201ENST00000380701 ZNF280AP59817 542 aaPredicted RBP7.26□□□□□ -1.25
CCDC171-201ENST00000380701 GAD2Q05329 585 aa7.26□□□□□ -1.25
CCDC171-201ENST00000380701 KLC1Q07866 573 aa7.26□□□□□ -1.25
CCDC171-201ENST00000380701 LAPTM5Q13571 262 aa7.26□□□□□ -1.25
CCDC171-201ENST00000380701 FRG1Q14331 258 aaKnown RBP7.26□□□□□ -1.25
CCDC171-201ENST00000380701 KPNB1Q14974 876 aaKnown RBP7.26□□□□□ -1.25
CCDC171-201ENST00000380701 TRMT5Q32P41 509 aaKnown RBP7.26□□□□□ -1.25
CCDC171-201ENST00000380701 TIMM50Q3ZCQ8 353 aa7.26□□□□□ -1.25
CCDC171-201ENST00000380701 SAMD4BQ5PRF9 694 aaKnown RBP7.26□□□□□ -1.25
CCDC171-201ENST00000380701 TTC33Q6PID6 262 aaPredicted RBP7.26□□□□□ -1.25
CCDC171-201ENST00000380701 KCNT2Q6UVM3 1135 aa7.26□□□□□ -1.25
CCDC171-201ENST00000380701 ZNF571Q7Z3V5 609 aaPredicted RBP7.26□□□□□ -1.25
CCDC171-201ENST00000380701 TFAP2DQ7Z6R9 452 aa7.26□□□□□ -1.25
CCDC171-201ENST00000380701 TMEM161BQ8NDZ6 487 aa7.26□□□□□ -1.25
CCDC171-201ENST00000380701 CAVIN3Q969G5 261 aa7.26□□□□□ -1.25
CCDC171-201ENST00000380701 PPP1R14AQ96A00 147 aa7.26□□□□□ -1.25
CCDC171-201ENST00000380701 FUBP3Q96I24 572 aaKnown RBP eCLIP7.26□□□□□ -1.25
CCDC171-201ENST00000380701 TCF7L2Q9NQB0 619 aa7.26□□□□□ -1.25
CCDC171-201ENST00000380701 ELOVL2Q9NXB9 296 aa7.26□□□□□ -1.25
CCDC171-201ENST00000380701 SH3BP4Q9P0V3 963 aa7.26□□□□□ -1.25
CCDC171-201ENST00000380701 SUCOQ9UBS9 1254 aaKnown RBP7.26□□□□□ -1.25
CCDC171-201ENST00000380701 RPS6KA6Q9UK32 745 aa7.26□□□□□ -1.25
CCDC171-201ENST00000380701 HEBP2Q9Y5Z4 205 aa7.26□□□□□ -1.25
CCDC171-201ENST00000380701 ACTL7BQ9Y614 415 aa7.26□□□□□ -1.25
CCDC171-201ENST00000380701 COLEC10Q9Y6Z7 277 aa7.26□□□□□ -1.25
CCDC171-201ENST00000380701 TMEM131LA2VDJ0 1609 aa7.26□□□□□ -1.25
CCDC171-201ENST00000380701 PER2O15055 1255 aa7.26□□□□□ -1.25
CCDC171-201ENST00000380701 MGRN1O60291 552 aa7.26□□□□□ -1.25
CCDC171-201ENST00000380701 TBL1XO60907 577 aa7.26□□□□□ -1.25
CCDC171-201ENST00000380701 PGK1P00558 417 aa7.26□□□□□ -1.25
CCDC171-201ENST00000380701 MMP3P08254 477 aa7.26□□□□□ -1.25
CCDC171-201ENST00000380701 MAPKAPK2P49137 400 aa7.26□□□□□ -1.25
CCDC171-201ENST00000380701 PCYT1AP49585 367 aa7.26□□□□□ -1.25
CCDC171-201ENST00000380701 TOB1P50616 345 aaPredicted RBP7.26□□□□□ -1.25
CCDC171-201ENST00000380701 AP1S1P61966 158 aa7.26□□□□□ -1.25
CCDC171-201ENST00000380701 CCDC85BQ15834 202 aaPredicted RBP7.26□□□□□ -1.25
CCDC171-201ENST00000380701 KCNT1Q5JUK3 1230 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms