RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 PPP2R5DQ14738 602 aa9.52□□□□□ -0.89
PTPRA-204ENST00000380393 TBRG1Q3YBR2 411 aa9.52□□□□□ -0.89
PTPRA-204ENST00000380393 FAM171BQ6P995 826 aa9.52□□□□□ -0.89
PTPRA-204ENST00000380393 HAUS6Q7Z4H7 955 aa9.52□□□□□ -0.89
PTPRA-204ENST00000380393 ST13P5Q8NFI4 369 aaPredicted RBP9.52□□□□□ -0.89
PTPRA-204ENST00000380393 OR2T3Q8NH03 318 aa9.52□□□□□ -0.89
PTPRA-204ENST00000380393 ZFP90Q8TF47 636 aa9.52□□□□□ -0.89
PTPRA-204ENST00000380393 SNAPC3Q92966 411 aa9.52□□□□□ -0.89
PTPRA-204ENST00000380393 TMEM80Q96HE8 168 aa9.52□□□□□ -0.89
PTPRA-204ENST00000380393 OPALINQ96PE5 141 aa9.52□□□□□ -0.89
PTPRA-204ENST00000380393 TTYH2Q9BSA4 534 aa9.52□□□□□ -0.89
PTPRA-204ENST00000380393 CDADC1Q9BWV3 514 aa9.52□□□□□ -0.89
PTPRA-204ENST00000380393 TUFT1Q9NNX1 390 aa9.52□□□□□ -0.89
PTPRA-204ENST00000380393 INTS7Q9NVH2 962 aaKnown RBP9.52□□□□□ -0.89
PTPRA-204ENST00000380393 POLLQ9UGP5 575 aa9.52□□□□□ -0.89
PTPRA-204ENST00000380393 CHORDC1Q9UHD1 332 aaPredicted RBP9.52□□□□□ -0.89
PTPRA-204ENST00000380393 PCOLCE2Q9UKZ9 415 aa9.52□□□□□ -0.89
PTPRA-204ENST00000380393 PCDHA6Q9UN73 950 aa9.52□□□□□ -0.89
PTPRA-204ENST00000380393 POLIQ9UNA4 740 aa9.52□□□□□ -0.89
PTPRA-204ENST00000380393 PCDHA8Q9Y5H6 950 aa9.52□□□□□ -0.89
PTPRA-204ENST00000380393 ZNF3P17036 446 aa9.52□□□□□ -0.89
PTPRA-204ENST00000380393 CBLP22681 906 aa9.52□□□□□ -0.89
PTPRA-204ENST00000380393 EEF1B2P24534 225 aaKnown RBP9.52□□□□□ -0.89
PTPRA-204ENST00000380393 GRIK1P39086 918 aa9.52□□□□□ -0.89
PTPRA-204ENST00000380393 MARCKSL1P49006 195 aa9.52□□□□□ -0.89
PTPRA-204ENST00000380393 HSD17B7P56937 341 aa9.52□□□□□ -0.89
PTPRA-204ENST00000380393 BNIP2Q12982 314 aa9.52□□□□□ -0.89
PTPRA-204ENST00000380393 FLOT2Q14254 428 aa9.52□□□□□ -0.89
PTPRA-204ENST00000380393 CCNG2Q16589 344 aa9.52□□□□□ -0.89
PTPRA-204ENST00000380393 CRY2Q49AN0 593 aa9.52□□□□□ -0.89
PTPRA-204ENST00000380393 KRT77Q7Z794 578 aa9.52□□□□□ -0.89
PTPRA-204ENST00000380393 NEK8Q86SG6 692 aa9.52□□□□□ -0.89
PTPRA-204ENST00000380393 THNSL1Q8IYQ7 743 aa9.52□□□□□ -0.89
PTPRA-204ENST00000380393 RFFLQ8WZ73 363 aa9.52□□□□□ -0.89
PTPRA-204ENST00000380393 GTF2H4Q92759 462 aa9.52□□□□□ -0.89
PTPRA-204ENST00000380393 TSEN34Q9BSV6 310 aaKnown RBP9.52□□□□□ -0.89
PTPRA-204ENST00000380393 TTPALQ9BTX7 342 aa9.52□□□□□ -0.89
PTPRA-204ENST00000380393 AKIP1Q9NQ31 210 aa9.52□□□□□ -0.89
PTPRA-204ENST00000380393 PFDN2Q9UHV9 154 aa9.52□□□□□ -0.89
PTPRA-204ENST00000380393 STRIP2Q9ULQ0 834 aa9.52□□□□□ -0.89
PTPRA-204ENST00000380393 CACNG2Q9Y698 323 aa9.52□□□□□ -0.89
PTPRA-204ENST00000380393 PDZK1P1A8MUH7 402 aa9.51□□□□□ -0.89
PTPRA-204ENST00000380393 SERPINA6P08185 405 aa9.51□□□□□ -0.89
PTPRA-204ENST00000380393 PSKH1P11801 424 aa9.51□□□□□ -0.89
PTPRA-204ENST00000380393 NCAM1P13591 858 aa9.51□□□□□ -0.89
PTPRA-204ENST00000380393 SHMT1P34896 483 aa9.51□□□□□ -0.89
PTPRA-204ENST00000380393 ATXN3P54252 364 aaPredicted RBP9.51□□□□□ -0.89
PTPRA-204ENST00000380393 FKBP3Q00688 224 aaKnown RBP9.51□□□□□ -0.89
PTPRA-204ENST00000380393 BFSP1Q12934 665 aa9.51□□□□□ -0.89
PTPRA-204ENST00000380393 KCTD2Q14681 263 aa9.51□□□□□ -0.89
PTPRA-204ENST00000380393 Q3ZCU0 254 aa9.51□□□□□ -0.89
PTPRA-204ENST00000380393 AASDHQ4L235 1098 aaPredicted RBP9.51□□□□□ -0.89
PTPRA-204ENST00000380393 RNASEH2BQ5TBB1 312 aaKnown RBP9.51□□□□□ -0.89
PTPRA-204ENST00000380393 ZFP1Q6P2D0 407 aa9.51□□□□□ -0.89
PTPRA-204ENST00000380393 GJB7Q6PEY0 223 aa9.51□□□□□ -0.89
PTPRA-204ENST00000380393 KCTD8Q6ZWB6 473 aa9.51□□□□□ -0.89
PTPRA-204ENST00000380393 IRF2BP2Q7Z5L9 587 aa9.51□□□□□ -0.89
PTPRA-204ENST00000380393 POC5Q8NA72 575 aa9.51□□□□□ -0.89
PTPRA-204ENST00000380393 SPATA18Q8TC71 538 aa9.51□□□□□ -0.89
PTPRA-204ENST00000380393 LARP4BQ92615 738 aaKnown RBP9.51□□□□□ -0.89
PTPRA-204ENST00000380393 FBXW5Q969U6 566 aa9.51□□□□□ -0.89
PTPRA-204ENST00000380393 MAGED4Q96JG8 741 aa9.51□□□□□ -0.89
PTPRA-204ENST00000380393 BTBD6Q96KE9 485 aa9.51□□□□□ -0.89
PTPRA-204ENST00000380393 C7orf25Q9BPX7 421 aa9.51□□□□□ -0.89
PTPRA-204ENST00000380393 BRIP1Q9BX63 1249 aa9.51□□□□□ -0.89
PTPRA-204ENST00000380393 COQ10BQ9H8M1 238 aa9.51□□□□□ -0.89
PTPRA-204ENST00000380393 SP110Q9HB58 689 aa9.51□□□□□ -0.89
PTPRA-204ENST00000380393 CD93Q9NPY3 652 aa9.51□□□□□ -0.89
PTPRA-204ENST00000380393 KCNQ5Q9NR82 932 aa9.51□□□□□ -0.89
PTPRA-204ENST00000380393 KCND2Q9NZV8 630 aa9.51□□□□□ -0.89
PTPRA-204ENST00000380393 PTBP2Q9UKA9 531 aaKnown RBP9.51□□□□□ -0.89
PTPRA-204ENST00000380393 HDAC9Q9UKV0 1011 aa9.51□□□□□ -0.89
PTPRA-204ENST00000380393 C19orf81C9J6K1 198 aa9.51□□□□□ -0.89
PTPRA-204ENST00000380393 PRSS44E7EML9 344 aa9.51□□□□□ -0.89
PTPRA-204ENST00000380393 TM9SF1O15321 606 aa9.51□□□□□ -0.89
PTPRA-204ENST00000380393 SSX5O60225 188 aa9.51□□□□□ -0.89
PTPRA-204ENST00000380393 KCNK2O95069 426 aa9.51□□□□□ -0.89
PTPRA-204ENST00000380393 GGPS1O95749 300 aa9.51□□□□□ -0.89
PTPRA-204ENST00000380393 ZNF26P17031 533 aaPredicted RBP9.51□□□□□ -0.89
PTPRA-204ENST00000380393 NT5C2P49902 561 aa9.51□□□□□ -0.89
PTPRA-204ENST00000380393 TRIM25Q14258 630 aaKnown RBP9.51□□□□□ -0.89
PTPRA-204ENST00000380393 DOK7Q18PE1 504 aa9.51□□□□□ -0.89
PTPRA-204ENST00000380393 GTF2IRD2BQ6EKJ0 949 aa9.51□□□□□ -0.89
PTPRA-204ENST00000380393 GTF2IRD2Q86UP8 949 aa9.51□□□□□ -0.89
PTPRA-204ENST00000380393 ARRDC4Q8NCT1 418 aa9.51□□□□□ -0.89
PTPRA-204ENST00000380393 C1orf54Q8WWF1 131 aa9.51□□□□□ -0.89
PTPRA-204ENST00000380393 B3GALT6Q96L58 329 aa9.51□□□□□ -0.89
PTPRA-204ENST00000380393 SEMA6AQ9H2E6 1030 aa9.51□□□□□ -0.89
PTPRA-204ENST00000380393 TOR3AQ9H497 397 aa9.51□□□□□ -0.89
PTPRA-204ENST00000380393 ABCB10Q9NRK6 738 aa9.51□□□□□ -0.89
PTPRA-204ENST00000380393 ZNF804BA4D1E1 1349 aa9.51□□□□□ -0.89
PTPRA-204ENST00000380393 LOC100653049A0A140TA62 436 aa9.51□□□□□ -0.89
PTPRA-204ENST00000380393 APOL1O14791 398 aa9.51□□□□□ -0.89
PTPRA-204ENST00000380393 KRT34O76011 436 aa9.51□□□□□ -0.89
PTPRA-204ENST00000380393 HMGN1P05114 100 aa9.51□□□□□ -0.89
PTPRA-204ENST00000380393 AOC1P19801 751 aa9.51□□□□□ -0.89
PTPRA-204ENST00000380393 MATN1P21941 496 aa9.51□□□□□ -0.89
PTPRA-204ENST00000380393 CYP2C18P33260 490 aa9.51□□□□□ -0.89
PTPRA-204ENST00000380393 GRIA1P42261 906 aa9.51□□□□□ -0.89
PTPRA-204ENST00000380393 HARS2P49590 506 aaKnown RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms