RNA–Protein interactions for RNA: ENST00000379236.3

TNFRSF4-201, Transcript of TNF receptor superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF4, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-201ENST00000379236 MT-CO1P00395 513 aa25.23■■□□□ 1.63
TNFRSF4-201ENST00000379236 SERPINC1P01008 464 aa25.23■■□□□ 1.63
TNFRSF4-201ENST00000379236 GNA12Q03113 381 aa25.23■■□□□ 1.63
TNFRSF4-201ENST00000379236 TRIP6Q15654 476 aaKnown RBP25.23■■□□□ 1.63
TNFRSF4-201ENST00000379236 RAB6CQ53S08 254 aa25.23■■□□□ 1.63
TNFRSF4-201ENST00000379236 C22orf39Q6P5X5 142 aa25.23■■□□□ 1.63
TNFRSF4-201ENST00000379236 DCUN1D2Q6PH85 259 aa25.23■■□□□ 1.63
TNFRSF4-201ENST00000379236 WDR59Q6PJI9 974 aa25.23■■□□□ 1.63
TNFRSF4-201ENST00000379236 LAYNQ6UX15 382 aa25.23■■□□□ 1.63
TNFRSF4-201ENST00000379236 PRPF39Q86UA1 669 aaKnown RBP25.23■■□□□ 1.63
TNFRSF4-201ENST00000379236 TBC1D31Q96DN5 1066 aa25.23■■□□□ 1.63
TNFRSF4-201ENST00000379236 RAB6CQ9H0N0 254 aa25.23■■□□□ 1.63
TNFRSF4-201ENST00000379236 OSBPL2Q9H1P3 480 aa25.23■■□□□ 1.63
TNFRSF4-201ENST00000379236 KDM4CQ9H3R0 1056 aa25.23■■□□□ 1.63
TNFRSF4-201ENST00000379236 SARDHQ9UL12 918 aa25.23■■□□□ 1.63
TNFRSF4-201ENST00000379236 PPM1HQ9ULR3 514 aa25.23■■□□□ 1.63
TNFRSF4-201ENST00000379236 CHD5Q8TDI0 1954 aa25.22■■□□□ 1.63
TNFRSF4-201ENST00000379236 PLK4O00444 970 aa25.22■■□□□ 1.63
TNFRSF4-201ENST00000379236 KPNA3O00505 521 aaPredicted RBP25.22■■□□□ 1.63
TNFRSF4-201ENST00000379236 RTN2O75298 545 aa25.22■■□□□ 1.63
TNFRSF4-201ENST00000379236 PRNPP04156 253 aa25.22■■□□□ 1.63
TNFRSF4-201ENST00000379236 CHRNA3P32297 505 aa25.22■■□□□ 1.63
TNFRSF4-201ENST00000379236 NRG1Q02297 640 aaPredicted RBP25.22■■□□□ 1.63
TNFRSF4-201ENST00000379236 ASIC2Q16515 512 aa25.22■■□□□ 1.63
TNFRSF4-201ENST00000379236 ACAD10Q6JQN1 1059 aa25.22■■□□□ 1.63
TNFRSF4-201ENST00000379236 SCYL2Q6P3W7 929 aa25.22■■□□□ 1.63
TNFRSF4-201ENST00000379236 SLFN11Q7Z7L1 901 aa25.22■■□□□ 1.63
TNFRSF4-201ENST00000379236 SERAC1Q96JX3 654 aa25.22■■□□□ 1.63
TNFRSF4-201ENST00000379236 MCEEQ96PE7 176 aa25.22■■□□□ 1.63
TNFRSF4-201ENST00000379236 RETREG1Q9H6L5 497 aa25.22■■□□□ 1.63
TNFRSF4-201ENST00000379236 ACACBO00763 2458 aa25.21■■□□□ 1.63
TNFRSF4-201ENST00000379236 LRRC53A6NM62 1247 aa25.21■■□□□ 1.63
TNFRSF4-201ENST00000379236 K7ERQ8 282 aa25.21■■□□□ 1.63
TNFRSF4-201ENST00000379236 FLRT2O43155 660 aa25.21■■□□□ 1.63
TNFRSF4-201ENST00000379236 PLRG1O43660 514 aaKnown RBP25.21■■□□□ 1.63
TNFRSF4-201ENST00000379236 TRIM16O95361 564 aa25.21■■□□□ 1.63
TNFRSF4-201ENST00000379236 PLEKP08567 350 aaPredicted RBP25.21■■□□□ 1.63
TNFRSF4-201ENST00000379236 RHOQP17081 205 aa25.21■■□□□ 1.63
TNFRSF4-201ENST00000379236 GLDCP23378 1020 aa25.21■■□□□ 1.63
TNFRSF4-201ENST00000379236 MAPKAPK2P49137 400 aa25.21■■□□□ 1.63
TNFRSF4-201ENST00000379236 CCT8P50990 548 aa25.21■■□□□ 1.63
TNFRSF4-201ENST00000379236 METAP1P53582 386 aa25.21■■□□□ 1.63
TNFRSF4-201ENST00000379236 HDAC4P56524 1084 aa25.21■■□□□ 1.63
TNFRSF4-201ENST00000379236 SLC20A2Q08357 652 aa25.21■■□□□ 1.63
TNFRSF4-201ENST00000379236 CNTN1Q12860 1018 aa25.21■■□□□ 1.63
TNFRSF4-201ENST00000379236 EFHC2Q5JST6 749 aa25.21■■□□□ 1.63
TNFRSF4-201ENST00000379236 CCDC185Q8N715 623 aa25.21■■□□□ 1.63
TNFRSF4-201ENST00000379236 CENPIQ92674 756 aaPredicted RBP25.21■■□□□ 1.63
TNFRSF4-201ENST00000379236 TNKS2Q9H2K2 1166 aa25.21■■□□□ 1.63
TNFRSF4-201ENST00000379236 DNAI1Q9UI46 699 aa25.21■■□□□ 1.63
TNFRSF4-201ENST00000379236 HPCAL4Q9UM19 191 aa25.21■■□□□ 1.63
TNFRSF4-201ENST00000379236 PCDHGB2Q9Y5G2 931 aa25.21■■□□□ 1.63
TNFRSF4-201ENST00000379236 DOCK9Q9BZ29 2069 aa25.21■■□□□ 1.63
TNFRSF4-201ENST00000379236 TPRP12270 2363 aaKnown RBP25.2■■□□□ 1.63
TNFRSF4-201ENST00000379236 TMCO5BA8MYB1 307 aa25.2■■□□□ 1.62
TNFRSF4-201ENST00000379236 VILLO15195 856 aa25.2■■□□□ 1.62
TNFRSF4-201ENST00000379236 CCP110O43303 1012 aa25.2■■□□□ 1.62
TNFRSF4-201ENST00000379236 SMAD6O43541 496 aaKnown RBP25.2■■□□□ 1.62
TNFRSF4-201ENST00000379236 DFNA5O60443 496 aa25.2■■□□□ 1.62
TNFRSF4-201ENST00000379236 CD38P28907 300 aa25.2■■□□□ 1.62
TNFRSF4-201ENST00000379236 SERPINH1P50454 418 aaKnown RBP25.2■■□□□ 1.62
TNFRSF4-201ENST00000379236 DNA2P51530 1060 aa25.2■■□□□ 1.62
TNFRSF4-201ENST00000379236 ZNF143P52747 638 aaPredicted RBP25.2■■□□□ 1.62
TNFRSF4-201ENST00000379236 ZNF423Q2M1K9 1284 aa25.2■■□□□ 1.62
TNFRSF4-201ENST00000379236 ZNF354CQ86Y25 554 aa25.2■■□□□ 1.62
TNFRSF4-201ENST00000379236 OR2A12Q8NGT7 310 aa25.2■■□□□ 1.62
TNFRSF4-201ENST00000379236 NTAN1Q96AB6 310 aa25.2■■□□□ 1.62
TNFRSF4-201ENST00000379236 PPP1R16AQ96I34 528 aa25.2■■□□□ 1.62
TNFRSF4-201ENST00000379236 ORAI3Q9BRQ5 295 aa25.2■■□□□ 1.62
TNFRSF4-201ENST00000379236 CEP44Q9C0F1 390 aa25.2■■□□□ 1.62
TNFRSF4-201ENST00000379236 IL36AQ9UHA7 158 aa25.2■■□□□ 1.62
TNFRSF4-201ENST00000379236 LRIG2O94898 1065 aa25.19■■□□□ 1.62
TNFRSF4-201ENST00000379236 SPINK2P20155 84 aa25.19■■□□□ 1.62
TNFRSF4-201ENST00000379236 NUDT1P36639 197 aa25.19■■□□□ 1.62
TNFRSF4-201ENST00000379236 CTSKP43235 329 aa25.19■■□□□ 1.62
TNFRSF4-201ENST00000379236 GEMIN4P57678 1058 aaKnown RBP25.19■■□□□ 1.62
TNFRSF4-201ENST00000379236 PPP2CBP62714 309 aa25.19■■□□□ 1.62
TNFRSF4-201ENST00000379236 PPP2CAP67775 309 aa25.19■■□□□ 1.62
TNFRSF4-201ENST00000379236 FAM193AP78312 1265 aa25.19■■□□□ 1.62
TNFRSF4-201ENST00000379236 INAVAQ3KP66 663 aa25.19■■□□□ 1.62
TNFRSF4-201ENST00000379236 AGBL4Q5VU57 503 aa25.19■■□□□ 1.62
TNFRSF4-201ENST00000379236 SFMBT2Q5VUG0 894 aa25.19■■□□□ 1.62
TNFRSF4-201ENST00000379236 IRF2BP2Q7Z5L9 587 aa25.19■■□□□ 1.62
TNFRSF4-201ENST00000379236 MCOLN2Q8IZK6 566 aa25.19■■□□□ 1.62
TNFRSF4-201ENST00000379236 PCDH20Q8N6Y1 951 aaKnown RBP25.19■■□□□ 1.62
TNFRSF4-201ENST00000379236 TMIEQ8NEW7 156 aa25.19■■□□□ 1.62
TNFRSF4-201ENST00000379236 GRIN3AQ8TCU5 1115 aa25.19■■□□□ 1.62
TNFRSF4-201ENST00000379236 RHBDD1Q8TEB9 315 aa25.19■■□□□ 1.62
TNFRSF4-201ENST00000379236 BAP1Q92560 729 aa25.19■■□□□ 1.62
TNFRSF4-201ENST00000379236 SCNM1Q9BWG6 230 aa25.19■■□□□ 1.62
TNFRSF4-201ENST00000379236 TMEM248Q9NWD8 314 aa25.19■■□□□ 1.62
TNFRSF4-201ENST00000379236 ZNF212Q9UDV6 495 aa25.19■■□□□ 1.62
TNFRSF4-201ENST00000379236 PCOLCE2Q9UKZ9 415 aa25.19■■□□□ 1.62
TNFRSF4-201ENST00000379236 CHD8Q9HCK8 2581 aa25.19■■□□□ 1.62
TNFRSF4-201ENST00000379236 A0A1W2PQC6 194 aa25.18■■□□□ 1.62
TNFRSF4-201ENST00000379236 SYCE3A1L190 88 aa25.18■■□□□ 1.62
TNFRSF4-201ENST00000379236 KCNK3O14649 394 aa25.18■■□□□ 1.62
TNFRSF4-201ENST00000379236 MAT2AP31153 395 aaKnown RBP25.18■■□□□ 1.62
TNFRSF4-201ENST00000379236 ST3GAL2Q16842 350 aa25.18■■□□□ 1.62
TNFRSF4-201ENST00000379236 MANEALQ5VSG8 457 aa25.18■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms