RNA–Protein interactions for RNA: ENST00000378526.8

LIG3-202, Transcript of DNA ligase 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIG3, Length 8,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-202ENST00000378526 ZNF467Q7Z7K2 595 aaPredicted RBP8.85□□□□□ -0.99
LIG3-202ENST00000378526 GTF2IRD2Q86UP8 949 aa8.85□□□□□ -0.99
LIG3-202ENST00000378526 ARMC8Q8IUR7 673 aa8.85□□□□□ -0.99
LIG3-202ENST00000378526 ING5Q8WYH8 240 aa8.85□□□□□ -0.99
LIG3-202ENST00000378526 RRNAD1Q96FB5 475 aaKnown RBP8.85□□□□□ -0.99
LIG3-202ENST00000378526 MAGEB10Q96LZ2 347 aaPredicted RBP8.85□□□□□ -0.99
LIG3-202ENST00000378526 TIPINQ9BVW5 301 aa8.85□□□□□ -0.99
LIG3-202ENST00000378526 NCKAP1Q9Y2A7 1128 aa8.85□□□□□ -0.99
LIG3-202ENST00000378526 UGT2B15P54855 530 aa8.85□□□□□ -0.99
LIG3-202ENST00000378526 FGL2Q14314 439 aa8.85□□□□□ -0.99
LIG3-202ENST00000378526 PON3Q15166 354 aa8.85□□□□□ -0.99
LIG3-202ENST00000378526 FNBP1LQ5T0N5 605 aa8.85□□□□□ -0.99
LIG3-202ENST00000378526 PAPD7Q5XG87 772 aaKnown RBP8.85□□□□□ -0.99
LIG3-202ENST00000378526 OTUD7AQ8TE49 926 aaPredicted RBP8.85□□□□□ -0.99
LIG3-202ENST00000378526 NSUN6Q8TEA1 469 aaKnown RBP8.85□□□□□ -0.99
LIG3-202ENST00000378526 TEFMQ96QE5 360 aaKnown RBP8.85□□□□□ -0.99
LIG3-202ENST00000378526 LPIN3Q9BQK8 851 aa8.85□□□□□ -0.99
LIG3-202ENST00000378526 PHF20Q9BVI0 1012 aa8.85□□□□□ -0.99
LIG3-202ENST00000378526 APOL5Q9BWW9 433 aa8.85□□□□□ -0.99
LIG3-202ENST00000378526 RC3H2Q9HBD1 1191 aaKnown RBP8.85□□□□□ -0.99
LIG3-202ENST00000378526 PCDHB16Q9NRJ7 776 aa8.85□□□□□ -0.99
LIG3-202ENST00000378526 GNG8Q9UK08 70 aa8.85□□□□□ -0.99
LIG3-202ENST00000378526 PSME2Q9UL46 239 aa8.85□□□□□ -0.99
LIG3-202ENST00000378526 PNMA8BQ9ULN7 279 aaPredicted RBP8.85□□□□□ -0.99
LIG3-202ENST00000378526 GRIA3P42263 894 aa8.85□□□□□ -0.99
LIG3-202ENST00000378526 NKX6-1P78426 367 aaPredicted RBP8.85□□□□□ -0.99
LIG3-202ENST00000378526 DUOXA2Q1HG44 320 aa8.85□□□□□ -0.99
LIG3-202ENST00000378526 GRTP1Q5TC63 336 aa8.85□□□□□ -0.99
LIG3-202ENST00000378526 ZNF549Q6P9A3 640 aa8.85□□□□□ -0.99
LIG3-202ENST00000378526 FAM20CQ8IXL6 584 aa8.85□□□□□ -0.99
LIG3-202ENST00000378526 ZSCAN18Q8TBC5 510 aaPredicted RBP8.85□□□□□ -0.99
LIG3-202ENST00000378526 TGFBRAP1Q8WUH2 860 aa8.85□□□□□ -0.99
LIG3-202ENST00000378526 OR5B12Q96R08 314 aa8.85□□□□□ -0.99
LIG3-202ENST00000378526 KCTD15Q96SI1 283 aaPredicted RBP8.85□□□□□ -0.99
LIG3-202ENST00000378526 TXN2Q99757 166 aa8.85□□□□□ -0.99
LIG3-202ENST00000378526 NUDT15Q9NV35 164 aa8.85□□□□□ -0.99
LIG3-202ENST00000378526 STAP2Q9UGK3 403 aa8.85□□□□□ -0.99
LIG3-202ENST00000378526 DHRS12A0PJE2 317 aa8.85□□□□□ -0.99
LIG3-202ENST00000378526 TUBAL3A6NHL2 446 aa8.85□□□□□ -0.99
LIG3-202ENST00000378526 TULP2O00295 520 aa8.85□□□□□ -0.99
LIG3-202ENST00000378526 RAD17O75943 681 aa8.85□□□□□ -0.99
LIG3-202ENST00000378526 ABCG1P45844 678 aa8.85□□□□□ -0.99
LIG3-202ENST00000378526 CYP4F2P78329 520 aa8.85□□□□□ -0.99
LIG3-202ENST00000378526 CYP4F3Q08477 520 aa8.85□□□□□ -0.99
LIG3-202ENST00000378526 MB21D2Q8IYB1 491 aaPredicted RBP8.85□□□□□ -0.99
LIG3-202ENST00000378526 TOR3AQ9H497 397 aa8.85□□□□□ -0.99
LIG3-202ENST00000378526 PLK2Q9NYY3 685 aa8.85□□□□□ -0.99
LIG3-202ENST00000378526 PTH1RQ03431 593 aa8.85□□□□□ -0.99
LIG3-202ENST00000378526 PRAMEF17Q5VTA0 474 aa8.85□□□□□ -0.99
LIG3-202ENST00000378526 P2RY8Q86VZ1 359 aa8.85□□□□□ -0.99
LIG3-202ENST00000378526 REXO5Q96IC2 774 aaKnown RBP8.85□□□□□ -0.99
LIG3-202ENST00000378526 C2orf40Q9H1Z8 148 aa8.85□□□□□ -0.99
LIG3-202ENST00000378526 KCTD10Q9H3F6 313 aa8.85□□□□□ -0.99
LIG3-202ENST00000378526 ANKRA2Q9H9E1 313 aa8.85□□□□□ -0.99
LIG3-202ENST00000378526 LRFN2Q9ULH4 789 aa8.85□□□□□ -0.99
LIG3-202ENST00000378526 RPS6KL1Q9Y6S9 549 aa8.85□□□□□ -0.99
LIG3-202ENST00000378526 WDR19Q8NEZ3 1342 aa8.85□□□□□ -0.99
LIG3-202ENST00000378526 A0A0D9SFI3 127 aa8.84□□□□□ -0.99
LIG3-202ENST00000378526 MRASO14807 208 aa8.84□□□□□ -0.99
LIG3-202ENST00000378526 SPTLC1O15269 473 aa8.84□□□□□ -0.99
LIG3-202ENST00000378526 CDKN2CP42773 168 aa8.84□□□□□ -0.99
LIG3-202ENST00000378526 ARL4DP49703 201 aa8.84□□□□□ -0.99
LIG3-202ENST00000378526 CAMK2GQ13555 558 aaPredicted RBP8.84□□□□□ -0.99
LIG3-202ENST00000378526 PLA2G4EQ3MJ16 856 aa8.84□□□□□ -0.99
LIG3-202ENST00000378526 GXYLT1Q4G148 440 aa8.84□□□□□ -0.99
LIG3-202ENST00000378526 ARHGAP36Q6ZRI8 547 aa8.84□□□□□ -0.99
LIG3-202ENST00000378526 CMTR1Q8N1G2 835 aaKnown RBP8.84□□□□□ -0.99
LIG3-202ENST00000378526 FNDC5Q8NAU1 212 aa8.84□□□□□ -0.99
LIG3-202ENST00000378526 CCDC54Q8NEL0 328 aa8.84□□□□□ -0.99
LIG3-202ENST00000378526 ZNF75CPQ92670 426 aaPredicted RBP8.84□□□□□ -0.99
LIG3-202ENST00000378526 CCDC17Q96LX7 622 aa8.84□□□□□ -0.99
LIG3-202ENST00000378526 PAFAH2Q99487 392 aa8.84□□□□□ -0.99
LIG3-202ENST00000378526 LYVE1Q9Y5Y7 322 aa8.84□□□□□ -0.99
LIG3-202ENST00000378526 PIGBOS1A0A0B4J2F0 54 aa8.84□□□□□ -0.99
LIG3-202ENST00000378526 RPL3P39023 403 aaKnown RBP8.84□□□□□ -0.99
LIG3-202ENST00000378526 RCAN1P53805 252 aa8.84□□□□□ -0.99
LIG3-202ENST00000378526 RGS8P57771 180 aaPredicted RBP8.84□□□□□ -0.99
LIG3-202ENST00000378526 MGAT5Q09328 741 aa8.84□□□□□ -0.99
LIG3-202ENST00000378526 B3GALNT2Q8NCR0 500 aa8.84□□□□□ -0.99
LIG3-202ENST00000378526 AFG1LQ8WV93 481 aa8.84□□□□□ -0.99
LIG3-202ENST00000378526 AGAP3Q96P47 875 aa8.84□□□□□ -0.99
LIG3-202ENST00000378526 IFT46Q9NQC8 304 aa8.84□□□□□ -0.99
LIG3-202ENST00000378526 CFL2Q9Y281 166 aa8.84□□□□□ -0.99
LIG3-202ENST00000378526 ACTL7BQ9Y614 415 aa8.84□□□□□ -0.99
LIG3-202ENST00000378526 SERPINA6P08185 405 aa8.84□□□□□ -0.99
LIG3-202ENST00000378526 PRMT2P55345 433 aa8.84□□□□□ -0.99
LIG3-202ENST00000378526 SLC3A1Q07837 685 aa8.84□□□□□ -0.99
LIG3-202ENST00000378526 PPIL2Q13356 520 aa8.84□□□□□ -0.99
LIG3-202ENST00000378526 MOB1BQ7L9L4 216 aa8.84□□□□□ -0.99
LIG3-202ENST00000378526 OOSP2Q86WS3 158 aa8.84□□□□□ -0.99
LIG3-202ENST00000378526 GLYCTKQ8IVS8 523 aa8.84□□□□□ -0.99
LIG3-202ENST00000378526 ASCC1Q8N9N2 400 aaKnown RBP8.84□□□□□ -0.99
LIG3-202ENST00000378526 WDSUB1Q8N9V3 476 aa8.84□□□□□ -0.99
LIG3-202ENST00000378526 ZNF431Q8TF32 576 aaPredicted RBP8.84□□□□□ -0.99
LIG3-202ENST00000378526 ZNF669Q96BR6 464 aaPredicted RBP8.84□□□□□ -0.99
LIG3-202ENST00000378526 YIPF2Q9BWQ6 316 aa8.84□□□□□ -0.99
LIG3-202ENST00000378526 MTF2Q9Y483 593 aaPredicted RBP8.84□□□□□ -0.99
LIG3-202ENST00000378526 CHRM3P20309 590 aa8.84□□□□□ -0.99
LIG3-202ENST00000378526 MZF1P28698 734 aaPredicted RBP8.84□□□□□ -0.99
LIG3-202ENST00000378526 NME5P56597 212 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms