RNA–Protein interactions for RNA: ENST00000378078.4

RGP1-201, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGP1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-201ENST00000378078 ARHGAP28Q9P2N2 729 aa16.54■□□□□ 0.24
RGP1-201ENST00000378078 KIAA1257Q9ULG3 409 aa16.54■□□□□ 0.24
RGP1-201ENST00000378078 CEP170Q5SW79 1584 aa16.54■□□□□ 0.24
RGP1-201ENST00000378078 DDTLA6NHG4 134 aaPredicted RBP16.54■□□□□ 0.24
RGP1-201ENST00000378078 SSNA1O43805 119 aa16.54■□□□□ 0.24
RGP1-201ENST00000378078 SNUPNO95149 360 aaKnown RBP16.54■□□□□ 0.24
RGP1-201ENST00000378078 UQCRBP14927 111 aa16.54■□□□□ 0.24
RGP1-201ENST00000378078 PSMD8P48556 350 aa16.54■□□□□ 0.24
RGP1-201ENST00000378078 PUDPQ08623 228 aa16.54■□□□□ 0.24
RGP1-201ENST00000378078 PPIL2Q13356 520 aa16.54■□□□□ 0.24
RGP1-201ENST00000378078 SLC45A4Q5BKX6 768 aa16.54■□□□□ 0.24
RGP1-201ENST00000378078 PCNX4Q63HM2 1172 aa16.54■□□□□ 0.24
RGP1-201ENST00000378078 C4orf22Q6V702 233 aa16.54■□□□□ 0.24
RGP1-201ENST00000378078 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.54■□□□□ 0.24
RGP1-201ENST00000378078 WDR49Q8IV35 697 aa16.54■□□□□ 0.24
RGP1-201ENST00000378078 OR4A15Q8NGL6 344 aa16.54■□□□□ 0.24
RGP1-201ENST00000378078 ITFG1Q8TB96 612 aa16.54■□□□□ 0.24
RGP1-201ENST00000378078 FANCEQ9HB96 536 aa16.54■□□□□ 0.24
RGP1-201ENST00000378078 UBAP1Q9NZ09 502 aa16.54■□□□□ 0.24
RGP1-201ENST00000378078 FBXO21O94952 628 aa16.54■□□□□ 0.24
RGP1-201ENST00000378078 MATN4O95460 622 aa16.54■□□□□ 0.24
RGP1-201ENST00000378078 CXCL14O95715 111 aa16.54■□□□□ 0.24
RGP1-201ENST00000378078 MUTP22033 750 aa16.54■□□□□ 0.24
RGP1-201ENST00000378078 SGMS1Q86VZ5 419 aa16.54■□□□□ 0.24
RGP1-201ENST00000378078 ACSS2Q9NR19 701 aa16.54■□□□□ 0.24
RGP1-201ENST00000378078 TAS2R13Q9NYV9 303 aa16.54■□□□□ 0.24
RGP1-201ENST00000378078 ZBTB11O95625 1053 aaPredicted RBP16.54■□□□□ 0.24
RGP1-201ENST00000378078 WDR93Q6P2C0 686 aa16.54■□□□□ 0.24
RGP1-201ENST00000378078 DEFB119Q8N690 84 aa16.54■□□□□ 0.24
RGP1-201ENST00000378078 NSMCE2Q96MF7 247 aa16.54■□□□□ 0.24
RGP1-201ENST00000378078 CDK12Q9NYV4 1490 aaPredicted RBP16.54■□□□□ 0.24
RGP1-201ENST00000378078 CCNYL3P0C7X3 344 aa16.53■□□□□ 0.24
RGP1-201ENST00000378078 NR2F1P10589 423 aa16.53■□□□□ 0.24
RGP1-201ENST00000378078 ACAP1Q15027 740 aa16.53■□□□□ 0.24
RGP1-201ENST00000378078 OR52L1Q8NGH7 329 aa16.53■□□□□ 0.24
RGP1-201ENST00000378078 VANGL1Q8TAA9 524 aaPredicted RBP16.53■□□□□ 0.24
RGP1-201ENST00000378078 TRIM63Q969Q1 353 aa16.53■□□□□ 0.24
RGP1-201ENST00000378078 CDC42EP4Q9H3Q1 356 aaKnown RBP16.53■□□□□ 0.24
RGP1-201ENST00000378078 PLK2Q9NYY3 685 aa16.53■□□□□ 0.24
RGP1-201ENST00000378078 EHD3Q9NZN3 535 aa16.53■□□□□ 0.24
RGP1-201ENST00000378078 NCKIPSDQ9NZQ3 722 aa16.53■□□□□ 0.24
RGP1-201ENST00000378078 UXTQ9UBK9 157 aaPredicted RBP16.53■□□□□ 0.24
RGP1-201ENST00000378078 TAGLN3Q9UI15 199 aa16.53■□□□□ 0.24
RGP1-201ENST00000378078 GPC6Q9Y625 555 aaPredicted RBP16.53■□□□□ 0.24
RGP1-201ENST00000378078 ZNF839A8K0R7 811 aa16.53■□□□□ 0.24
RGP1-201ENST00000378078 PPP1R3GB7ZBB8 358 aa16.53■□□□□ 0.24
RGP1-201ENST00000378078 OR5F1O95221 314 aa16.53■□□□□ 0.24
RGP1-201ENST00000378078 F9P00740 461 aa16.53■□□□□ 0.24
RGP1-201ENST00000378078 S100A3P33764 101 aa16.53■□□□□ 0.24
RGP1-201ENST00000378078 FXR2P51116 673 aaKnown RBP eCLIP16.53■□□□□ 0.24
RGP1-201ENST00000378078 GIT2Q14161 759 aa16.53■□□□□ 0.24
RGP1-201ENST00000378078 PCDH20Q8N6Y1 951 aaKnown RBP16.53■□□□□ 0.24
RGP1-201ENST00000378078 OR56A4Q8NGH8 313 aa16.53■□□□□ 0.24
RGP1-201ENST00000378078 PNPT1Q8TCS8 783 aaKnown RBP16.53■□□□□ 0.24
RGP1-201ENST00000378078 SELENOMQ8WWX9 145 aa16.53■□□□□ 0.24
RGP1-201ENST00000378078 GPER1Q99527 375 aa16.53■□□□□ 0.24
RGP1-201ENST00000378078 ITGA11Q9UKX5 1188 aa16.53■□□□□ 0.24
RGP1-201ENST00000378078 BANF1O75531 89 aa16.53■□□□□ 0.24
RGP1-201ENST00000378078 OMPP47874 163 aa16.53■□□□□ 0.24
RGP1-201ENST00000378078 WSCD1Q658N2 575 aa16.53■□□□□ 0.24
RGP1-201ENST00000378078 GCNT7Q6ZNI0 430 aa16.53■□□□□ 0.24
RGP1-201ENST00000378078 GDPD5Q8WTR4 605 aa16.53■□□□□ 0.24
RGP1-201ENST00000378078 FAM92AA1XBS5 289 aa16.53■□□□□ 0.24
RGP1-201ENST00000378078 TSPAN9O75954 239 aa16.53■□□□□ 0.24
RGP1-201ENST00000378078 HDCP19113 662 aa16.53■□□□□ 0.24
RGP1-201ENST00000378078 TRAF3Q13114 568 aa16.53■□□□□ 0.24
RGP1-201ENST00000378078 C7orf61Q8IZ16 206 aa16.53■□□□□ 0.24
RGP1-201ENST00000378078 NAXEQ8NCW5 288 aa16.53■□□□□ 0.24
RGP1-201ENST00000378078 CYP2W1Q8TAV3 490 aa16.53■□□□□ 0.24
RGP1-201ENST00000378078 LMLNQ96KR4 655 aa16.53■□□□□ 0.24
RGP1-201ENST00000378078 ATP9AO75110 1047 aa16.53■□□□□ 0.24
RGP1-201ENST00000378078 RTN3O95197 1032 aaPredicted RBP16.53■□□□□ 0.24
RGP1-201ENST00000378078 CD44P16070 742 aaKnown RBP16.53■□□□□ 0.24
RGP1-201ENST00000378078 FASP25445 335 aa16.53■□□□□ 0.24
RGP1-201ENST00000378078 EPB41L4BQ9H329 900 aa16.53■□□□□ 0.24
RGP1-201ENST00000378078 DMGDHQ9UI17 866 aaKnown RBP16.53■□□□□ 0.24
RGP1-201ENST00000378078 TPP1O14773 563 aa16.53■□□□□ 0.24
RGP1-201ENST00000378078 FAM228BP0C875 321 aa16.53■□□□□ 0.24
RGP1-201ENST00000378078 SSTR1P30872 391 aa16.53■□□□□ 0.24
RGP1-201ENST00000378078 RFX4Q33E94 735 aa16.53■□□□□ 0.24
RGP1-201ENST00000378078 ZC3H12AQ5D1E8 599 aaKnown RBP16.53■□□□□ 0.24
RGP1-201ENST00000378078 GRTP1Q5TC63 336 aa16.53■□□□□ 0.24
RGP1-201ENST00000378078 RETSATQ6NUM9 610 aa16.53■□□□□ 0.24
RGP1-201ENST00000378078 SLC28A2O43868 658 aa16.52■□□□□ 0.24
RGP1-201ENST00000378078 FAM151BQ6UXP7 276 aa16.52■□□□□ 0.24
RGP1-201ENST00000378078 PACS2Q86VP3 889 aa16.52■□□□□ 0.24
RGP1-201ENST00000378078 MCEMP1Q8IX19 187 aa16.52■□□□□ 0.24
RGP1-201ENST00000378078 ATL1Q8WXF7 558 aa16.52■□□□□ 0.24
RGP1-201ENST00000378078 EPB41L1Q9H4G0 881 aa16.52■□□□□ 0.24
RGP1-201ENST00000378078 BARX2Q9UMQ3 279 aaPredicted RBP16.52■□□□□ 0.24
RGP1-201ENST00000378078 TRPV2Q9Y5S1 764 aa16.52■□□□□ 0.24
RGP1-201ENST00000378078 SPATA31A1Q5TZJ5 1347 aa16.52■□□□□ 0.24
RGP1-201ENST00000378078 PIAS1O75925 651 aa16.52■□□□□ 0.24
RGP1-201ENST00000378078 VEGFAP15692 232 aaPredicted RBP16.52■□□□□ 0.24
RGP1-201ENST00000378078 CDC25CP30307 473 aa16.52■□□□□ 0.24
RGP1-201ENST00000378078 RCVRNP35243 200 aa16.52■□□□□ 0.24
RGP1-201ENST00000378078 PIK3CGP48736 1102 aa16.52■□□□□ 0.24
RGP1-201ENST00000378078 C15orf59Q2T9L4 293 aaPredicted RBP16.52■□□□□ 0.24
RGP1-201ENST00000378078 EIF3MQ7L2H7 374 aaKnown RBP16.52■□□□□ 0.24
RGP1-201ENST00000378078 BPIFB6Q8NFQ5 453 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms