RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 SPATA13Q96N96 652 aa13.82□□□□□ -0.2
GPC6-201ENST00000377047 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.82□□□□□ -0.2
GPC6-201ENST00000377047 DMGDHQ9UI17 866 aaKnown RBP13.82□□□□□ -0.2
GPC6-201ENST00000377047 CTPS1P17812 591 aa13.82□□□□□ -0.2
GPC6-201ENST00000377047 LAG3P18627 525 aa13.82□□□□□ -0.2
GPC6-201ENST00000377047 NFKB1P19838 968 aa13.82□□□□□ -0.2
GPC6-201ENST00000377047 VHLP40337 213 aa13.82□□□□□ -0.2
GPC6-201ENST00000377047 NEPROQ6NW34 567 aa13.82□□□□□ -0.2
GPC6-201ENST00000377047 SRLQ86TD4 932 aa13.82□□□□□ -0.2
GPC6-201ENST00000377047 SEPHS2Q99611 448 aa13.82□□□□□ -0.2
GPC6-201ENST00000377047 CERS4Q9HA82 394 aa13.82□□□□□ -0.2
GPC6-201ENST00000377047 SLC24A3Q9HC58 644 aa13.82□□□□□ -0.2
GPC6-201ENST00000377047 NDUFAF1Q9Y375 327 aa13.82□□□□□ -0.2
GPC6-201ENST00000377047 OR6C75A6NL08 312 aa13.81□□□□□ -0.2
GPC6-201ENST00000377047 FGBP02675 491 aa13.81□□□□□ -0.2
GPC6-201ENST00000377047 ARF4P18085 180 aaPredicted RBP13.81□□□□□ -0.2
GPC6-201ENST00000377047 PRKAA2P54646 552 aa13.81□□□□□ -0.2
GPC6-201ENST00000377047 DUSP4Q13115 394 aa13.81□□□□□ -0.2
GPC6-201ENST00000377047 NAB1Q13506 487 aa13.81□□□□□ -0.2
GPC6-201ENST00000377047 PKN2Q16513 984 aaKnown RBP13.81□□□□□ -0.2
GPC6-201ENST00000377047 FAM46CQ5VWP2 391 aa13.81□□□□□ -0.2
GPC6-201ENST00000377047 C9orf57Q5W0N0 161 aa13.81□□□□□ -0.2
GPC6-201ENST00000377047 FAM228AQ86W67 206 aa13.81□□□□□ -0.2
GPC6-201ENST00000377047 GATAD2AQ86YP4 633 aa13.81□□□□□ -0.2
GPC6-201ENST00000377047 GPR20Q99678 358 aa13.81□□□□□ -0.2
GPC6-201ENST00000377047 BRD9Q9H8M2 597 aa13.81□□□□□ -0.2
GPC6-201ENST00000377047 FBXO6Q9NRD1 293 aaPredicted RBP13.81□□□□□ -0.2
GPC6-201ENST00000377047 C1orf232A0A0U1RR37 186 aa13.81□□□□□ -0.2
GPC6-201ENST00000377047 HTR1BP28222 390 aa13.81□□□□□ -0.2
GPC6-201ENST00000377047 PCYT1AP49585 367 aa13.81□□□□□ -0.2
GPC6-201ENST00000377047 GPR158Q5T848 1215 aa13.81□□□□□ -0.2
GPC6-201ENST00000377047 DPP10Q8N608 796 aa13.81□□□□□ -0.2
GPC6-201ENST00000377047 COL26A1Q96A83 441 aa13.81□□□□□ -0.2
GPC6-201ENST00000377047 STARD13Q9Y3M8 1113 aa13.81□□□□□ -0.2
GPC6-201ENST00000377047 MRPS15P82914 257 aaKnown RBP13.81□□□□□ -0.2
GPC6-201ENST00000377047 ITGB3BPQ13352 177 aaPredicted RBP13.81□□□□□ -0.2
GPC6-201ENST00000377047 FAM35AQ86V20 835 aa13.81□□□□□ -0.2
GPC6-201ENST00000377047 TOP6BLQ8N6T0 577 aa13.81□□□□□ -0.2
GPC6-201ENST00000377047 ANKRD7Q92527 254 aa13.81□□□□□ -0.2
GPC6-201ENST00000377047 CLIP3Q96DZ5 547 aa13.81□□□□□ -0.2
GPC6-201ENST00000377047 SEMA3CQ99985 751 aa13.81□□□□□ -0.2
GPC6-201ENST00000377047 ALG9Q9H6U8 611 aa13.81□□□□□ -0.2
GPC6-201ENST00000377047 SLC40A1Q9NP59 571 aa13.81□□□□□ -0.2
GPC6-201ENST00000377047 PTCH2Q9Y6C5 1203 aa13.81□□□□□ -0.2
GPC6-201ENST00000377047 UMPSP11172 480 aa13.81□□□□□ -0.2
GPC6-201ENST00000377047 ATP4AP20648 1035 aa13.81□□□□□ -0.2
GPC6-201ENST00000377047 PPP1R26Q5T8A7 1209 aaPredicted RBP13.81□□□□□ -0.2
GPC6-201ENST00000377047 ICE2Q659A1 982 aa13.81□□□□□ -0.2
GPC6-201ENST00000377047 COMMD2Q86X83 199 aa13.81□□□□□ -0.2
GPC6-201ENST00000377047 TMEM132CQ8N3T6 1108 aa13.81□□□□□ -0.2
GPC6-201ENST00000377047 POMGNT2Q8NAT1 580 aa13.81□□□□□ -0.2
GPC6-201ENST00000377047 SLAIN1Q8ND83 568 aa13.81□□□□□ -0.2
GPC6-201ENST00000377047 POLR1DQ9Y2S0 133 aa13.81□□□□□ -0.2
GPC6-201ENST00000377047 YDJCA8MPS7 323 aa13.81□□□□□ -0.2
GPC6-201ENST00000377047 GUCY1B2O75343 617 aa13.81□□□□□ -0.2
GPC6-201ENST00000377047 SMNDC1O75940 238 aaKnown RBP eCLIP13.81□□□□□ -0.2
GPC6-201ENST00000377047 GNA13Q14344 377 aa13.81□□□□□ -0.2
GPC6-201ENST00000377047 GALNT3Q14435 633 aa13.81□□□□□ -0.2
GPC6-201ENST00000377047 ZNF544Q6NX49 715 aa13.81□□□□□ -0.2
GPC6-201ENST00000377047 ZNF621Q6ZSS3 439 aa13.81□□□□□ -0.2
GPC6-201ENST00000377047 REM2Q8IYK8 340 aaPredicted RBP13.81□□□□□ -0.2
GPC6-201ENST00000377047 OSBPL6Q9BZF3 934 aa13.81□□□□□ -0.2
GPC6-201ENST00000377047 TPP1O14773 563 aa13.8□□□□□ -0.2
GPC6-201ENST00000377047 ASGR1P07306 291 aa13.8□□□□□ -0.2
GPC6-201ENST00000377047 ANXA5P08758 320 aa13.8□□□□□ -0.2
GPC6-201ENST00000377047 PABPC1P11940 636 aaKnown RBP13.8□□□□□ -0.2
GPC6-201ENST00000377047 GOT1P17174 413 aa13.8□□□□□ -0.2
GPC6-201ENST00000377047 NTSP30990 170 aa13.8□□□□□ -0.2
GPC6-201ENST00000377047 FEN1P39748 380 aaKnown RBP13.8□□□□□ -0.2
GPC6-201ENST00000377047 CRY2Q49AN0 593 aa13.8□□□□□ -0.2
GPC6-201ENST00000377047 AFTPHQ6ULP2 937 aa13.8□□□□□ -0.2
GPC6-201ENST00000377047 ETNPPLQ8TBG4 499 aa13.8□□□□□ -0.2
GPC6-201ENST00000377047 UTP15Q8TED0 518 aaKnown RBP13.8□□□□□ -0.2
GPC6-201ENST00000377047 NRDE2Q9H7Z3 1164 aa13.8□□□□□ -0.2
GPC6-201ENST00000377047 PCDHGA4Q9Y5G9 962 aa13.8□□□□□ -0.2
GPC6-201ENST00000377047 ZSCAN5CA6NGD5 496 aaPredicted RBP13.8□□□□□ -0.2
GPC6-201ENST00000377047 DNTTP04053 509 aa13.8□□□□□ -0.2
GPC6-201ENST00000377047 COX7A2P14406 83 aa13.8□□□□□ -0.2
GPC6-201ENST00000377047 MAXP61244 160 aa13.8□□□□□ -0.2
GPC6-201ENST00000377047 IRX1P78414 480 aaPredicted RBP13.8□□□□□ -0.2
GPC6-201ENST00000377047 ACSM2AQ08AH3 577 aa13.8□□□□□ -0.2
GPC6-201ENST00000377047 NCF4Q15080 339 aa13.8□□□□□ -0.2
GPC6-201ENST00000377047 STXBP5Q5T5C0 1151 aa13.8□□□□□ -0.2
GPC6-201ENST00000377047 ACSM2BQ68CK6 577 aa13.8□□□□□ -0.2
GPC6-201ENST00000377047 TMEM26Q6ZUK4 368 aa13.8□□□□□ -0.2
GPC6-201ENST00000377047 FAM126BQ8IXS8 530 aa13.8□□□□□ -0.2
GPC6-201ENST00000377047 OR8D1Q8WZ84 308 aa13.8□□□□□ -0.2
GPC6-201ENST00000377047 RSPH9Q9H1X1 276 aaPredicted RBP13.8□□□□□ -0.2
GPC6-201ENST00000377047 CFAP97Q9P2B7 532 aa13.8□□□□□ -0.2
GPC6-201ENST00000377047 KLQ9UEF7 1012 aa13.8□□□□□ -0.2
GPC6-201ENST00000377047 MROH1Q8NDA8 1641 aa13.8□□□□□ -0.2
GPC6-201ENST00000377047 RGS5O15539 181 aa13.8□□□□□ -0.2
GPC6-201ENST00000377047 VPS4BO75351 444 aa13.8□□□□□ -0.2
GPC6-201ENST00000377047 MRPS5P82675 430 aaKnown RBP13.8□□□□□ -0.2
GPC6-201ENST00000377047 PFKFB4Q16877 469 aa13.8□□□□□ -0.2
GPC6-201ENST00000377047 HSDL1Q3SXM5 330 aa13.8□□□□□ -0.2
GPC6-201ENST00000377047 TBCELQ5QJ74 424 aa13.8□□□□□ -0.2
GPC6-201ENST00000377047 ZCCHC23Q6ZST2 131 aa13.8□□□□□ -0.2
GPC6-201ENST00000377047 PHACTR1Q9C0D0 580 aa13.8□□□□□ -0.2
GPC6-201ENST00000377047 GOLGA2P5Q9HBQ8 144 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms