RNA–Protein interactions for RNA: ENST00000376899.8

YIF1A-202, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 1,042 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-202ENST00000376899 SMAD6O43541 496 aaKnown RBP23.12■■□□□ 1.29
YIF1A-202ENST00000376899 PSTPIP1O43586 416 aa23.12■■□□□ 1.29
YIF1A-202ENST00000376899 RPP40O75818 363 aaKnown RBP23.12■■□□□ 1.29
YIF1A-202ENST00000376899 VAV1P15498 845 aa23.12■■□□□ 1.29
YIF1A-202ENST00000376899 KDELR1P24390 212 aa23.12■■□□□ 1.29
YIF1A-202ENST00000376899 KIF5AQ12840 1032 aa23.12■■□□□ 1.29
YIF1A-202ENST00000376899 SRSF5Q13243 272 aaKnown RBP23.12■■□□□ 1.29
YIF1A-202ENST00000376899 MAP7D1Q3KQU3 841 aa23.12■■□□□ 1.29
YIF1A-202ENST00000376899 USP39Q53GS9 565 aaKnown RBP23.12■■□□□ 1.29
YIF1A-202ENST00000376899 C22orf39Q6P5X5 142 aa23.12■■□□□ 1.29
YIF1A-202ENST00000376899 TMCO3Q6UWJ1 677 aa23.12■■□□□ 1.29
YIF1A-202ENST00000376899 RAPGEF5Q92565 580 aa23.12■■□□□ 1.29
YIF1A-202ENST00000376899 PRCCQ92733 491 aaPredicted RBP23.12■■□□□ 1.29
YIF1A-202ENST00000376899 CELF6Q96J87 481 aaKnown RBP23.12■■□□□ 1.29
YIF1A-202ENST00000376899 PDLIM2Q96JY6 352 aa23.12■■□□□ 1.29
YIF1A-202ENST00000376899 SLC39A8Q9C0K1 460 aa23.12■■□□□ 1.29
YIF1A-202ENST00000376899 DDX56Q9NY93 547 aaKnown RBP23.12■■□□□ 1.29
YIF1A-202ENST00000376899 USP36Q9P275 1121 aaKnown RBP23.12■■□□□ 1.29
YIF1A-202ENST00000376899 MFHAS1Q9Y4C4 1052 aa23.12■■□□□ 1.29
YIF1A-202ENST00000376899 ARHGAP42A6NI28 874 aa23.11■■□□□ 1.29
YIF1A-202ENST00000376899 C3orf70A6NLC5 250 aaPredicted RBP23.11■■□□□ 1.29
YIF1A-202ENST00000376899 RPS14P62263 151 aaKnown RBP23.11■■□□□ 1.29
YIF1A-202ENST00000376899 ZBTB16Q05516 673 aa23.11■■□□□ 1.29
YIF1A-202ENST00000376899 ELAVL3Q14576 367 aaKnown RBP23.11■■□□□ 1.29
YIF1A-202ENST00000376899 ZNF776Q68DI1 518 aaPredicted RBP23.11■■□□□ 1.29
YIF1A-202ENST00000376899 KIAA1324Q6UXG2 1013 aaKnown RBP23.11■■□□□ 1.29
YIF1A-202ENST00000376899 Q6ZVU0 165 aa23.11■■□□□ 1.29
YIF1A-202ENST00000376899 LRRC57Q8N9N7 239 aa23.11■■□□□ 1.29
YIF1A-202ENST00000376899 PCDH19Q8TAB3 1148 aa23.11■■□□□ 1.29
YIF1A-202ENST00000376899 SIPA1Q96FS4 1042 aa23.11■■□□□ 1.29
YIF1A-202ENST00000376899 FAM129BQ96TA1 746 aa23.11■■□□□ 1.29
YIF1A-202ENST00000376899 PHOX2BQ99453 314 aa23.11■■□□□ 1.29
YIF1A-202ENST00000376899 CALN1Q9BXU9 219 aa23.11■■□□□ 1.29
YIF1A-202ENST00000376899 PDFQ9HBH1 243 aa23.11■■□□□ 1.29
YIF1A-202ENST00000376899 ACTL7AQ9Y615 435 aa23.11■■□□□ 1.29
YIF1A-202ENST00000376899 ALOX15BO15296 676 aa23.1■■□□□ 1.29
YIF1A-202ENST00000376899 NRDCO43847 1150 aa23.1■■□□□ 1.29
YIF1A-202ENST00000376899 ZNF217O75362 1048 aa23.1■■□□□ 1.29
YIF1A-202ENST00000376899 ZNF821O75541 412 aaPredicted RBP23.1■■□□□ 1.29
YIF1A-202ENST00000376899 IGLV3-19P01714 112 aa23.1■■□□□ 1.29
YIF1A-202ENST00000376899 SERPINB6P35237 376 aa23.1■■□□□ 1.29
YIF1A-202ENST00000376899 PAPOLAP51003 745 aaKnown RBP23.1■■□□□ 1.29
YIF1A-202ENST00000376899 BYSLQ13895 437 aaKnown RBP23.1■■□□□ 1.29
YIF1A-202ENST00000376899 GSE1Q14687 1217 aa23.1■■□□□ 1.29
YIF1A-202ENST00000376899 ACCSLQ4AC99 568 aa23.1■■□□□ 1.29
YIF1A-202ENST00000376899 ANKRD20A8PQ5CZ79 823 aa23.1■■□□□ 1.29
YIF1A-202ENST00000376899 DAAM2Q86T65 1068 aa23.1■■□□□ 1.29
YIF1A-202ENST00000376899 STK40Q8N2I9 435 aa23.1■■□□□ 1.29
YIF1A-202ENST00000376899 CASKIN2Q8WXE0 1202 aa23.1■■□□□ 1.29
YIF1A-202ENST00000376899 ISG20Q96AZ6 181 aaKnown RBP23.1■■□□□ 1.29
YIF1A-202ENST00000376899 ITM2CQ9NQX7 267 aa23.1■■□□□ 1.29
YIF1A-202ENST00000376899 TRIM10Q9UDY6 481 aa23.1■■□□□ 1.29
YIF1A-202ENST00000376899 LRRD1A4D1F6 860 aa23.09■■□□□ 1.29
YIF1A-202ENST00000376899 GRID2IPA4D2P6 1211 aa23.09■■□□□ 1.29
YIF1A-202ENST00000376899 PRAMEF11O60813 436 aa23.09■■□□□ 1.29
YIF1A-202ENST00000376899 KRT1P04264 644 aa23.09■■□□□ 1.29
YIF1A-202ENST00000376899 IFI16Q16666 785 aaKnown RBP23.09■■□□□ 1.29
YIF1A-202ENST00000376899 INO80DQ53TQ3 878 aaPredicted RBP23.09■■□□□ 1.29
YIF1A-202ENST00000376899 ZFYVE27Q5T4F4 411 aa23.09■■□□□ 1.29
YIF1A-202ENST00000376899 NCBP2-AS2Q69YL0 99 aa23.09■■□□□ 1.29
YIF1A-202ENST00000376899 C11orf74Q86VG3 221 aa23.09■■□□□ 1.29
YIF1A-202ENST00000376899 PCDH20Q8N6Y1 951 aaKnown RBP23.09■■□□□ 1.29
YIF1A-202ENST00000376899 SUMF1Q8NBK3 374 aa23.09■■□□□ 1.29
YIF1A-202ENST00000376899 RLN3Q8WXF3 142 aa23.09■■□□□ 1.29
YIF1A-202ENST00000376899 OR8D1Q8WZ84 308 aa23.09■■□□□ 1.29
YIF1A-202ENST00000376899 ANP32BQ92688 251 aaKnown RBP23.09■■□□□ 1.29
YIF1A-202ENST00000376899 SPACA7Q96KW9 195 aa23.09■■□□□ 1.29
YIF1A-202ENST00000376899 CD93Q9NPY3 652 aa23.09■■□□□ 1.29
YIF1A-202ENST00000376899 IGHV1OR15-9A0A0B4J2B8 117 aa23.08■■□□□ 1.29
YIF1A-202ENST00000376899 MCF2LO15068 1137 aa23.08■■□□□ 1.29
YIF1A-202ENST00000376899 RNASEH1O60930 286 aaKnown RBP23.08■■□□□ 1.29
YIF1A-202ENST00000376899 NAP1L1P55209 391 aaKnown RBP23.08■■□□□ 1.29
YIF1A-202ENST00000376899 SIM2Q14190 667 aaPredicted RBP23.08■■□□□ 1.29
YIF1A-202ENST00000376899 PAFAH1B3Q15102 231 aaKnown RBP23.08■■□□□ 1.29
YIF1A-202ENST00000376899 ZNF662Q6ZS27 426 aa23.08■■□□□ 1.29
YIF1A-202ENST00000376899 ZNF354CQ86Y25 554 aa23.08■■□□□ 1.29
YIF1A-202ENST00000376899 TP53INP2Q8IXH6 220 aa23.08■■□□□ 1.29
YIF1A-202ENST00000376899 PLPP6Q8IY26 295 aa23.08■■□□□ 1.29
YIF1A-202ENST00000376899 PQLC3Q8N755 202 aa23.08■■□□□ 1.29
YIF1A-202ENST00000376899 OR2A12Q8NGT7 310 aa23.08■■□□□ 1.29
YIF1A-202ENST00000376899 NKD2Q969F2 451 aaPredicted RBP23.08■■□□□ 1.29
YIF1A-202ENST00000376899 ZC3H10Q96K80 434 aaKnown RBP23.08■■□□□ 1.29
YIF1A-202ENST00000376899 CCDC114Q96M63 670 aa23.08■■□□□ 1.29
YIF1A-202ENST00000376899 RNF157Q96PX1 679 aa23.08■■□□□ 1.29
YIF1A-202ENST00000376899 TSGA10Q9BZW7 698 aa23.08■■□□□ 1.29
YIF1A-202ENST00000376899 MBD1Q9UIS9 605 aaPredicted RBP23.08■■□□□ 1.29
YIF1A-202ENST00000376899 SCML1Q9UN30 329 aa23.08■■□□□ 1.29
YIF1A-202ENST00000376899 FCF1Q9Y324 198 aaKnown RBP23.08■■□□□ 1.29
YIF1A-202ENST00000376899 MACROD2A1Z1Q3 448 aa23.07■■□□□ 1.28
YIF1A-202ENST00000376899 TMCC1O94876 653 aa23.07■■□□□ 1.28
YIF1A-202ENST00000376899 BCKDHBP21953 392 aa23.07■■□□□ 1.28
YIF1A-202ENST00000376899 CST6Q15828 149 aa23.07■■□□□ 1.28
YIF1A-202ENST00000376899 TAZQ16635 292 aa23.07■■□□□ 1.28
YIF1A-202ENST00000376899 CEP68Q76N32 757 aa23.07■■□□□ 1.28
YIF1A-202ENST00000376899 CACUL1Q86Y37 369 aa23.07■■□□□ 1.28
YIF1A-202ENST00000376899 KATNAL2Q8IYT4 538 aa23.07■■□□□ 1.28
YIF1A-202ENST00000376899 RNF10Q8N5U6 811 aaKnown RBP23.07■■□□□ 1.28
YIF1A-202ENST00000376899 NETO2Q8NC67 525 aa23.07■■□□□ 1.28
YIF1A-202ENST00000376899 KIAA1524Q8TCG1 905 aa23.07■■□□□ 1.28
YIF1A-202ENST00000376899 PABPC3Q9H361 631 aaKnown RBP23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 328.4 ms