RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 ZFP1Q6P2D0 407 aa6.64□□□□□ -1.35
SMC1A-202ENST00000375340 SAPCD2Q86UD0 394 aa6.64□□□□□ -1.35
SMC1A-202ENST00000375340 ZNF781Q8N8C0 355 aa6.64□□□□□ -1.35
SMC1A-202ENST00000375340 MAGEE2Q8TD90 523 aaPredicted RBP6.64□□□□□ -1.35
SMC1A-202ENST00000375340 TRPC4APQ8TEL6 797 aa6.64□□□□□ -1.35
SMC1A-202ENST00000375340 TPD52L3Q96J77 140 aa6.64□□□□□ -1.35
SMC1A-202ENST00000375340 AGAP2Q99490 1192 aa6.64□□□□□ -1.35
SMC1A-202ENST00000375340 BPIFA1Q9NP55 256 aa6.64□□□□□ -1.35
SMC1A-202ENST00000375340 NMRK2Q9NPI5 230 aa6.64□□□□□ -1.35
SMC1A-202ENST00000375340 PRKAG3Q9UGI9 489 aa6.64□□□□□ -1.35
SMC1A-202ENST00000375340 USP54Q70EL1 1684 aa6.64□□□□□ -1.35
SMC1A-202ENST00000375340 C2orf81A6NN90 581 aa6.64□□□□□ -1.35
SMC1A-202ENST00000375340 F5H5T6 163 aa6.64□□□□□ -1.35
SMC1A-202ENST00000375340 H3BRB1 525 aa6.64□□□□□ -1.35
SMC1A-202ENST00000375340 PSMD12O00232 456 aaPredicted RBP6.64□□□□□ -1.35
SMC1A-202ENST00000375340 B3GAT3O94766 335 aa6.64□□□□□ -1.35
SMC1A-202ENST00000375340 ABCB1P08183 1280 aaPredicted RBP6.64□□□□□ -1.35
SMC1A-202ENST00000375340 TPBGLP0DKB5 382 aa6.64□□□□□ -1.35
SMC1A-202ENST00000375340 GPX6P59796 221 aa6.64□□□□□ -1.35
SMC1A-202ENST00000375340 MRPS15P82914 257 aaKnown RBP6.64□□□□□ -1.35
SMC1A-202ENST00000375340 SDHAF4Q5VUM1 108 aa6.64□□□□□ -1.35
SMC1A-202ENST00000375340 LIPMQ5VYY2 423 aa6.64□□□□□ -1.35
SMC1A-202ENST00000375340 ARMC3Q5W041 872 aa6.64□□□□□ -1.35
SMC1A-202ENST00000375340 ZFYVE19Q96K21 471 aa6.64□□□□□ -1.35
SMC1A-202ENST00000375340 QKIQ96PU8 341 aaKnown RBP eCLIP6.64□□□□□ -1.351e-6■■■■□ 26.1
SMC1A-202ENST00000375340 PLEKHG4BQ96PX9 1271 aa6.64□□□□□ -1.35
SMC1A-202ENST00000375340 ZNF670Q9BS34 389 aa6.64□□□□□ -1.35
SMC1A-202ENST00000375340 TUT1Q9H6E5 874 aaKnown RBP6.64□□□□□ -1.35
SMC1A-202ENST00000375340 SLC30A1Q9Y6M5 507 aa6.64□□□□□ -1.35
SMC1A-202ENST00000375340 C9JVG2 144 aa6.64□□□□□ -1.35
SMC1A-202ENST00000375340 CBX4O00257 560 aa6.64□□□□□ -1.35
SMC1A-202ENST00000375340 TMEM63AO94886 807 aa6.64□□□□□ -1.35
SMC1A-202ENST00000375340 ATP5BP06576 529 aaKnown RBP6.64□□□□□ -1.35
SMC1A-202ENST00000375340 SCNN1BP51168 640 aa6.64□□□□□ -1.35
SMC1A-202ENST00000375340 GBE1Q04446 702 aa6.64□□□□□ -1.35
SMC1A-202ENST00000375340 FSTL1Q12841 308 aa6.64□□□□□ -1.35
SMC1A-202ENST00000375340 OLIG2Q13516 323 aa6.64□□□□□ -1.35
SMC1A-202ENST00000375340 ADRM1Q16186 407 aa6.64□□□□□ -1.35
SMC1A-202ENST00000375340 SLC5A9Q2M3M2 681 aa6.64□□□□□ -1.35
SMC1A-202ENST00000375340 HEATR4Q86WZ0 1026 aa6.64□□□□□ -1.35
SMC1A-202ENST00000375340 TMEM192Q8IY95 271 aa6.64□□□□□ -1.35
SMC1A-202ENST00000375340 OR12D3Q9UGF7 316 aa6.64□□□□□ -1.35
SMC1A-202ENST00000375340 BLOC1S6Q9UL45 172 aa6.64□□□□□ -1.35
SMC1A-202ENST00000375340 SLC12A8A0AV02 714 aa6.64□□□□□ -1.35
SMC1A-202ENST00000375340 BTN3A1O00481 513 aa6.64□□□□□ -1.35
SMC1A-202ENST00000375340 CLOCKO15516 846 aa6.64□□□□□ -1.35
SMC1A-202ENST00000375340 SH3BGRLO75368 114 aa6.64□□□□□ -1.35
SMC1A-202ENST00000375340 VPS26AO75436 327 aa6.64□□□□□ -1.35
SMC1A-202ENST00000375340 THP07101 528 aa6.64□□□□□ -1.35
SMC1A-202ENST00000375340 CSH1P0DML2 217 aa6.64□□□□□ -1.35
SMC1A-202ENST00000375340 CSH2P0DML3 217 aa6.64□□□□□ -1.35
SMC1A-202ENST00000375340 HARS2P49590 506 aaKnown RBP6.64□□□□□ -1.35
SMC1A-202ENST00000375340 SLC9B1Q4ZJI4 515 aa6.64□□□□□ -1.35
SMC1A-202ENST00000375340 SLC39A12Q504Y0 691 aa6.64□□□□□ -1.35
SMC1A-202ENST00000375340 REP15Q6BDI9 236 aa6.64□□□□□ -1.35
SMC1A-202ENST00000375340 MRNIPQ6NTE8 343 aa6.64□□□□□ -1.35
SMC1A-202ENST00000375340 PATL1Q86TB9 770 aaKnown RBP6.64□□□□□ -1.35
SMC1A-202ENST00000375340 PLD5Q8N7P1 536 aa6.64□□□□□ -1.35
SMC1A-202ENST00000375340 GANCQ8TET4 914 aa6.64□□□□□ -1.35
SMC1A-202ENST00000375340 NR1H4Q96RI1 486 aaPredicted RBP6.64□□□□□ -1.35
SMC1A-202ENST00000375340 RBBP8Q99708 897 aa6.64□□□□□ -1.35
SMC1A-202ENST00000375340 ABCG8Q9H221 673 aa6.64□□□□□ -1.35
SMC1A-202ENST00000375340 TM7SF2O76062 418 aa6.63□□□□□ -1.35
SMC1A-202ENST00000375340 CLK1P49759 484 aaKnown RBP6.63□□□□□ -1.35
SMC1A-202ENST00000375340 NEK3P51956 506 aa6.63□□□□□ -1.35
SMC1A-202ENST00000375340 NAGLUP54802 743 aa6.63□□□□□ -1.35
SMC1A-202ENST00000375340 PWP1Q13610 501 aa6.63□□□□□ -1.35
SMC1A-202ENST00000375340 DDX39BQ13838 428 aaKnown RBP6.63□□□□□ -1.35
SMC1A-202ENST00000375340 TTC30AQ86WT1 665 aa6.63□□□□□ -1.35
SMC1A-202ENST00000375340 ELMOD1Q8N336 334 aa6.63□□□□□ -1.35
SMC1A-202ENST00000375340 GPR152Q8TDT2 470 aa6.63□□□□□ -1.35
SMC1A-202ENST00000375340 C6orf62Q9GZU0 229 aaPredicted RBP6.63□□□□□ -1.35
SMC1A-202ENST00000375340 EGFL7Q9UHF1 273 aa6.63□□□□□ -1.35
SMC1A-202ENST00000375340 CRLS1Q9UJA2 301 aa6.63□□□□□ -1.35
SMC1A-202ENST00000375340 ADAM28Q9UKQ2 775 aa6.63□□□□□ -1.35
SMC1A-202ENST00000375340 ATP11BQ9Y2G3 1177 aa6.63□□□□□ -1.35
SMC1A-202ENST00000375340 DLEC1Q9Y238 1755 aa6.63□□□□□ -1.35
SMC1A-202ENST00000375340 SCAMP3O14828 347 aaKnown RBP6.63□□□□□ -1.35
SMC1A-202ENST00000375340 HADHBP55084 474 aaKnown RBP6.63□□□□□ -1.35
SMC1A-202ENST00000375340 OXCT1P55809 520 aa6.63□□□□□ -1.35
SMC1A-202ENST00000375340 MAXP61244 160 aa6.63□□□□□ -1.35
SMC1A-202ENST00000375340 CHRNB3Q05901 458 aa6.63□□□□□ -1.35
SMC1A-202ENST00000375340 ACSBG2Q5FVE4 666 aa6.63□□□□□ -1.35
SMC1A-202ENST00000375340 PPP1R15BQ5SWA1 713 aa6.63□□□□□ -1.35
SMC1A-202ENST00000375340 FBXO39Q8N4B4 442 aa6.63□□□□□ -1.35
SMC1A-202ENST00000375340 B3GALNT2Q8NCR0 500 aa6.63□□□□□ -1.35
SMC1A-202ENST00000375340 FAM156AQ8NDB6 213 aa6.63□□□□□ -1.35
SMC1A-202ENST00000375340 DNAJB14Q8TBM8 379 aa6.63□□□□□ -1.35
SMC1A-202ENST00000375340 SH3KBP1Q96B97 665 aa6.63□□□□□ -1.35
SMC1A-202ENST00000375340 EIF2AQ9BY44 585 aaKnown RBP6.63□□□□□ -1.35
SMC1A-202ENST00000375340 SDCBP2Q9H190 292 aa6.63□□□□□ -1.35
SMC1A-202ENST00000375340 SCN3BQ9NY72 215 aa6.63□□□□□ -1.35
SMC1A-202ENST00000375340 TNFSF13BQ9Y275 285 aa6.63□□□□□ -1.35
SMC1A-202ENST00000375340 PAPPAQ13219 1627 aa6.63□□□□□ -1.35
SMC1A-202ENST00000375340 SMIM10L2AP0DMW4 78 aa6.63□□□□□ -1.35
SMC1A-202ENST00000375340 SMIM10L2BP0DMW5 78 aa6.63□□□□□ -1.35
SMC1A-202ENST00000375340 MZF1P28698 734 aaPredicted RBP6.63□□□□□ -1.35
SMC1A-202ENST00000375340 CXCR3P49682 368 aa6.63□□□□□ -1.35
SMC1A-202ENST00000375340 CDK7P50613 346 aa6.63□□□□□ -1.35
SMC1A-202ENST00000375340 RAB10P61026 200 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms