RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 FAM50BQ9Y247 325 aa11.7□□□□□ -0.54
PTCH1-203ENST00000375274 AK5Q9Y6K8 562 aa11.7□□□□□ -0.54
PTCH1-203ENST00000375274 IGLV3-22A0A075B6J6 115 aa11.7□□□□□ -0.54
PTCH1-203ENST00000375274 ATP6AP2A0A1C7CYW4 349 aa11.7□□□□□ -0.54
PTCH1-203ENST00000375274 DPPA5A6NC42 116 aa11.7□□□□□ -0.54
PTCH1-203ENST00000375274 LZTS3O60299 673 aaPredicted RBP11.7□□□□□ -0.54
PTCH1-203ENST00000375274 ATP6AP2O75787 350 aa11.7□□□□□ -0.54
PTCH1-203ENST00000375274 FAM155BO75949 473 aa11.7□□□□□ -0.54
PTCH1-203ENST00000375274 POMCP01189 267 aa11.7□□□□□ -0.54
PTCH1-203ENST00000375274 C2P06681 752 aa11.7□□□□□ -0.54
PTCH1-203ENST00000375274 TFEBP19484 476 aa11.7□□□□□ -0.54
PTCH1-203ENST00000375274 CRHR1P34998 444 aa11.7□□□□□ -0.54
PTCH1-203ENST00000375274 MAD2L1Q13257 205 aaPredicted RBP11.7□□□□□ -0.54
PTCH1-203ENST00000375274 SQLEQ14534 574 aa11.7□□□□□ -0.54
PTCH1-203ENST00000375274 CCDC142Q17RM4 750 aa11.7□□□□□ -0.54
PTCH1-203ENST00000375274 LPCAT4Q643R3 524 aa11.7□□□□□ -0.54
PTCH1-203ENST00000375274 SETD9Q8NE22 299 aa11.7□□□□□ -0.54
PTCH1-203ENST00000375274 SENP8Q96LD8 212 aa11.7□□□□□ -0.54
PTCH1-203ENST00000375274 HPS4Q9NQG7 708 aa11.7□□□□□ -0.54
PTCH1-203ENST00000375274 ARHGEF3Q9NR81 526 aa11.7□□□□□ -0.54
PTCH1-203ENST00000375274 SPATA31C2B4DYI2 1134 aa11.7□□□□□ -0.54
PTCH1-203ENST00000375274 MAGEC1O60732 1142 aa11.7□□□□□ -0.54
PTCH1-203ENST00000375274 ARIH2O95376 493 aa11.7□□□□□ -0.54
PTCH1-203ENST00000375274 CST3P01034 146 aaPredicted RBP11.7□□□□□ -0.54
PTCH1-203ENST00000375274 LGALS2P05162 132 aa11.7□□□□□ -0.54
PTCH1-203ENST00000375274 CHRNB2P17787 502 aa11.7□□□□□ -0.54
PTCH1-203ENST00000375274 HALP42357 657 aa11.7□□□□□ -0.54
PTCH1-203ENST00000375274 MAPK11Q15759 364 aa11.7□□□□□ -0.54
PTCH1-203ENST00000375274 TMEM26Q6ZUK4 368 aa11.7□□□□□ -0.54
PTCH1-203ENST00000375274 TBC1D19Q8N5T2 526 aa11.7□□□□□ -0.54
PTCH1-203ENST00000375274 DGCR14Q96DF8 476 aaKnown RBP11.7□□□□□ -0.54
PTCH1-203ENST00000375274 P2RY11Q96G91 374 aa11.7□□□□□ -0.54
PTCH1-203ENST00000375274 COLEC11Q9BWP8 271 aa11.7□□□□□ -0.54
PTCH1-203ENST00000375274 FBXO44Q9H4M3 255 aa11.7□□□□□ -0.54
PTCH1-203ENST00000375274 RERGLQ9H628 205 aa11.7□□□□□ -0.54
PTCH1-203ENST00000375274 DHX33Q9H6R0 707 aaKnown RBP11.7□□□□□ -0.54
PTCH1-203ENST00000375274 FBXO5Q9UKT4 447 aa11.7□□□□□ -0.54
PTCH1-203ENST00000375274 SATB2Q9UPW6 733 aa11.7□□□□□ -0.54
PTCH1-203ENST00000375274 TPRKBQ9Y3C4 175 aa11.7□□□□□ -0.54
PTCH1-203ENST00000375274 HES2Q9Y543 173 aa11.7□□□□□ -0.54
PTCH1-203ENST00000375274 RAD51BO15315 384 aa11.69□□□□□ -0.54
PTCH1-203ENST00000375274 B4GALT5O43286 388 aa11.69□□□□□ -0.54
PTCH1-203ENST00000375274 ATG7O95352 703 aa11.69□□□□□ -0.54
PTCH1-203ENST00000375274 C4BPAP04003 597 aaKnown RBP11.69□□□□□ -0.54
PTCH1-203ENST00000375274 AXLP30530 894 aa11.69□□□□□ -0.54
PTCH1-203ENST00000375274 MSX2P35548 267 aaPredicted RBP11.69□□□□□ -0.54
PTCH1-203ENST00000375274 RAB10P61026 200 aa11.69□□□□□ -0.54
PTCH1-203ENST00000375274 KLF10Q13118 480 aa11.69□□□□□ -0.54
PTCH1-203ENST00000375274 UTP15Q8TED0 518 aaKnown RBP11.69□□□□□ -0.54
PTCH1-203ENST00000375274 ZNF384Q8TF68 577 aa11.69□□□□□ -0.54
PTCH1-203ENST00000375274 GLT1D1Q96MS3 346 aa11.69□□□□□ -0.54
PTCH1-203ENST00000375274 HGH1Q9BTY7 390 aa11.69□□□□□ -0.54
PTCH1-203ENST00000375274 DGCR6LQ9BY27 220 aa11.69□□□□□ -0.54
PTCH1-203ENST00000375274 USE1Q9NZ43 259 aa11.69□□□□□ -0.54
PTCH1-203ENST00000375274 AJAP1Q9UKB5 411 aaPredicted RBP11.69□□□□□ -0.54
PTCH1-203ENST00000375274 NUDT5Q9UKK9 219 aa11.69□□□□□ -0.54
PTCH1-203ENST00000375274 PPP2R3BQ9Y5P8 575 aa11.69□□□□□ -0.54
PTCH1-203ENST00000375274 GNG14A0A1W2PPG7 69 aa11.69□□□□□ -0.54
PTCH1-203ENST00000375274 EME2A4GXA9 379 aaPredicted RBP11.69□□□□□ -0.54
PTCH1-203ENST00000375274 BDNFP23560 247 aa11.69□□□□□ -0.54
PTCH1-203ENST00000375274 FNBP1LQ5T0N5 605 aa11.69□□□□□ -0.54
PTCH1-203ENST00000375274 ANKRD22Q5VYY1 191 aa11.69□□□□□ -0.54
PTCH1-203ENST00000375274 FAM45BPQ6NSW5 357 aa11.69□□□□□ -0.54
PTCH1-203ENST00000375274 SVOPQ8N4V2 548 aa11.69□□□□□ -0.54
PTCH1-203ENST00000375274 STAG3L4Q8TBR4 150 aa11.69□□□□□ -0.54
PTCH1-203ENST00000375274 MTERF3Q96E29 417 aa11.69□□□□□ -0.54
PTCH1-203ENST00000375274 NDNQ99608 321 aa11.69□□□□□ -0.54
PTCH1-203ENST00000375274 MRPL57Q9BQC6 102 aaKnown RBP11.69□□□□□ -0.54
PTCH1-203ENST00000375274 MRPS26Q9BYN8 205 aaKnown RBP11.69□□□□□ -0.54
PTCH1-203ENST00000375274 ELOVL4Q9GZR5 314 aa11.69□□□□□ -0.54
PTCH1-203ENST00000375274 CDH19Q9H159 772 aa11.69□□□□□ -0.54
PTCH1-203ENST00000375274 WDR55Q9H6Y2 383 aaPredicted RBP11.69□□□□□ -0.54
PTCH1-203ENST00000375274 S100A14Q9HCY8 104 aa11.69□□□□□ -0.54
PTCH1-203ENST00000375274 VTA1Q9NP79 307 aa11.69□□□□□ -0.54
PTCH1-203ENST00000375274 SEMA4BQ9NPR2 832 aaPredicted RBP11.69□□□□□ -0.54
PTCH1-203ENST00000375274 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.69□□□□□ -0.54
PTCH1-203ENST00000375274 MTF2Q9Y483 593 aaPredicted RBP11.69□□□□□ -0.54
PTCH1-203ENST00000375274 UMODL1Q5DID0 1318 aa11.69□□□□□ -0.54
PTCH1-203ENST00000375274 CAPN8A6NHC0 703 aa11.69□□□□□ -0.54
PTCH1-203ENST00000375274 CXCL11O14625 94 aa11.69□□□□□ -0.54
PTCH1-203ENST00000375274 NKRFO15226 690 aaKnown RBP eCLIP11.69□□□□□ -0.54
PTCH1-203ENST00000375274 SEC22BO75396 215 aa11.69□□□□□ -0.54
PTCH1-203ENST00000375274 VAV1P15498 845 aa11.69□□□□□ -0.54
PTCH1-203ENST00000375274 TTC23Q5W5X9 447 aa11.69□□□□□ -0.54
PTCH1-203ENST00000375274 VSTM1Q6UX27 236 aa11.69□□□□□ -0.54
PTCH1-203ENST00000375274 MILR1Q7Z6M3 343 aa11.69□□□□□ -0.54
PTCH1-203ENST00000375274 HPS6Q86YV9 775 aa11.69□□□□□ -0.54
PTCH1-203ENST00000375274 CYP4X1Q8N118 509 aa11.69□□□□□ -0.54
PTCH1-203ENST00000375274 PTGR2Q8N8N7 351 aaPredicted RBP11.69□□□□□ -0.54
PTCH1-203ENST00000375274 RDH11Q8TC12 318 aa11.69□□□□□ -0.54
PTCH1-203ENST00000375274 BSNDQ8WZ55 320 aa11.69□□□□□ -0.54
PTCH1-203ENST00000375274 POLR1BQ9H9Y6 1135 aa11.69□□□□□ -0.54
PTCH1-203ENST00000375274 HMG20AQ9NP66 347 aa11.69□□□□□ -0.54
PTCH1-203ENST00000375274 SSU72Q9NP77 194 aaKnown RBP11.69□□□□□ -0.54
PTCH1-203ENST00000375274 ARHGAP28Q9P2N2 729 aa11.69□□□□□ -0.54
PTCH1-203ENST00000375274 SLC12A4Q9UP95 1085 aa11.69□□□□□ -0.54
PTCH1-203ENST00000375274 YDJCA8MPS7 323 aa11.69□□□□□ -0.54
PTCH1-203ENST00000375274 M0R2N6 131 aa11.69□□□□□ -0.54
PTCH1-203ENST00000375274 TRAFD1O14545 582 aaPredicted RBP11.69□□□□□ -0.54
PTCH1-203ENST00000375274 FANCGO15287 622 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms