RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 RAB6CQ9H0N0 254 aa8.88□□□□□ -0.99
SNRNP40-202ENST00000373720 MAGEH1Q9H213 219 aa8.88□□□□□ -0.99
SNRNP40-202ENST00000373720 C1orf21Q9H246 121 aa8.88□□□□□ -0.99
SNRNP40-202ENST00000373720 RHOJQ9H4E5 214 aa8.88□□□□□ -0.99
SNRNP40-202ENST00000373720 SLC40A1Q9NP59 571 aa8.88□□□□□ -0.99
SNRNP40-202ENST00000373720 TRMT13Q9NUP7 481 aaKnown RBP8.88□□□□□ -0.99
SNRNP40-202ENST00000373720 TLK1Q9UKI8 766 aa8.88□□□□□ -0.99
SNRNP40-202ENST00000373720 INPP5FQ9Y2H2 1132 aa8.88□□□□□ -0.99
SNRNP40-202ENST00000373720 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.88□□□□□ -0.99
SNRNP40-202ENST00000373720 TIMM13Q9Y5L4 95 aaPredicted RBP8.88□□□□□ -0.99
SNRNP40-202ENST00000373720 CDY1Q9Y6F8 540 aa8.88□□□□□ -0.99
SNRNP40-202ENST00000373720 JCHAINP01591 159 aa8.87□□□□□ -0.99
SNRNP40-202ENST00000373720 INHAP05111 366 aa8.87□□□□□ -0.99
SNRNP40-202ENST00000373720 SERPINE1P05121 402 aa8.87□□□□□ -0.99
SNRNP40-202ENST00000373720 DLDP09622 509 aaKnown RBP8.87□□□□□ -0.99
SNRNP40-202ENST00000373720 HAPLN1P10915 354 aaPredicted RBP8.87□□□□□ -0.99
SNRNP40-202ENST00000373720 NQO1P15559 274 aaKnown RBP8.87□□□□□ -0.99
SNRNP40-202ENST00000373720 CCND1P24385 295 aa8.87□□□□□ -0.99
SNRNP40-202ENST00000373720 MGAT1P26572 445 aa8.87□□□□□ -0.99
SNRNP40-202ENST00000373720 SLC11A2P49281 568 aa8.87□□□□□ -0.99
SNRNP40-202ENST00000373720 TMPRSS15P98073 1019 aa8.87□□□□□ -0.99
SNRNP40-202ENST00000373720 GAD2Q05329 585 aa8.87□□□□□ -0.99
SNRNP40-202ENST00000373720 STX3Q13277 289 aa8.87□□□□□ -0.99
SNRNP40-202ENST00000373720 PROX2Q3B8N5 592 aa8.87□□□□□ -0.99
SNRNP40-202ENST00000373720 USP41Q3LFD5 358 aa8.87□□□□□ -0.99
SNRNP40-202ENST00000373720 CLLU1OSQ5K130 101 aa8.87□□□□□ -0.99
SNRNP40-202ENST00000373720 RABGAP1LQ5R372 815 aa8.87□□□□□ -0.99
SNRNP40-202ENST00000373720 SH2D4BQ5SQS7 431 aa8.87□□□□□ -0.99
SNRNP40-202ENST00000373720 WASHC2DQ5SRD0 308 aa8.87□□□□□ -0.99
SNRNP40-202ENST00000373720 HP1BP3Q5SSJ5 553 aaPredicted RBP8.87□□□□□ -0.99
SNRNP40-202ENST00000373720 MARC1Q5VT66 337 aa8.87□□□□□ -0.99
SNRNP40-202ENST00000373720 RWDD4Q6NW29 188 aaKnown RBP8.87□□□□□ -0.99
SNRNP40-202ENST00000373720 CYB5D1Q6P9G0 228 aa8.87□□□□□ -0.99
SNRNP40-202ENST00000373720 RANBP10Q6VN20 620 aa8.87□□□□□ -0.99
SNRNP40-202ENST00000373720 CAPN12Q6ZSI9 719 aa8.87□□□□□ -0.99
SNRNP40-202ENST00000373720 GPRIN1Q7Z2K8 1008 aa8.87□□□□□ -0.99
SNRNP40-202ENST00000373720 ANKRD33Q7Z3H0 272 aa8.87□□□□□ -0.99
SNRNP40-202ENST00000373720 RTN4RL1Q86UN2 441 aaPredicted RBP8.87□□□□□ -0.99
SNRNP40-202ENST00000373720 FAM126BQ8IXS8 530 aa8.87□□□□□ -0.99
SNRNP40-202ENST00000373720 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.87□□□□□ -0.99
SNRNP40-202ENST00000373720 PPP1R14CQ8TAE6 165 aa8.87□□□□□ -0.99
SNRNP40-202ENST00000373720 PIWIL2Q8TC59 973 aaKnown RBP8.87□□□□□ -0.99
SNRNP40-202ENST00000373720 EDEM1Q92611 657 aa8.87□□□□□ -0.99
SNRNP40-202ENST00000373720 USP13Q92995 863 aaPredicted RBP8.87□□□□□ -0.99
SNRNP40-202ENST00000373720 PLD4Q96BZ4 506 aa8.87□□□□□ -0.99
SNRNP40-202ENST00000373720 ZBTB9Q96C00 473 aa8.87□□□□□ -0.99
SNRNP40-202ENST00000373720 SERAC1Q96JX3 654 aa8.87□□□□□ -0.99
SNRNP40-202ENST00000373720 FAM111AQ96PZ2 611 aa8.87□□□□□ -0.99
SNRNP40-202ENST00000373720 TBL1YQ9BQ87 522 aa8.87□□□□□ -0.99
SNRNP40-202ENST00000373720 LPIN3Q9BQK8 851 aa8.87□□□□□ -0.99
SNRNP40-202ENST00000373720 TTPALQ9BTX7 342 aa8.87□□□□□ -0.99
SNRNP40-202ENST00000373720 FSD1LQ9BXM9 530 aa8.87□□□□□ -0.99
SNRNP40-202ENST00000373720 RABEP2Q9H5N1 569 aa8.87□□□□□ -0.99
SNRNP40-202ENST00000373720 TLE6Q9H808 572 aa8.87□□□□□ -0.99
SNRNP40-202ENST00000373720 C10orf88Q9H8K7 445 aa8.87□□□□□ -0.99
SNRNP40-202ENST00000373720 ECT2Q9H8V3 914 aa8.87□□□□□ -0.99
SNRNP40-202ENST00000373720 PRDM5Q9NQX1 630 aaPredicted RBP8.87□□□□□ -0.99
SNRNP40-202ENST00000373720 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.87□□□□□ -0.99
SNRNP40-202ENST00000373720 SEPT10Q9P0V9 454 aa8.87□□□□□ -0.99
SNRNP40-202ENST00000373720 UXTQ9UBK9 157 aaPredicted RBP8.87□□□□□ -0.99
SNRNP40-202ENST00000373720 VTI1BQ9UEU0 232 aa8.87□□□□□ -0.99
SNRNP40-202ENST00000373720 ZFP69BQ9UJL9 534 aa8.87□□□□□ -0.99
SNRNP40-202ENST00000373720 SYNJ2BP-COX16A0A087WUM0 186 aa8.86□□□□□ -0.99
SNRNP40-202ENST00000373720 A0A087X1B8 175 aa8.86□□□□□ -0.99
SNRNP40-202ENST00000373720 ZCWPW2A0A1B0GU75 182 aa8.86□□□□□ -0.99
SNRNP40-202ENST00000373720 SOBPA7XYQ1 873 aa8.86□□□□□ -0.99
SNRNP40-202ENST00000373720 FAM72CH0Y354 149 aa8.86□□□□□ -0.99
SNRNP40-202ENST00000373720 KCNK1O00180 336 aa8.86□□□□□ -0.99
SNRNP40-202ENST00000373720 SLC7A4O43246 635 aa8.86□□□□□ -0.99
SNRNP40-202ENST00000373720 PLIN3O60664 434 aa8.86□□□□□ -0.99
SNRNP40-202ENST00000373720 DDHD2O94830 711 aa8.86□□□□□ -0.99
SNRNP40-202ENST00000373720 UBOX5O94941 541 aa8.86□□□□□ -0.99
SNRNP40-202ENST00000373720 CSH1P0DML2 217 aa8.86□□□□□ -0.99
SNRNP40-202ENST00000373720 CSH2P0DML3 217 aa8.86□□□□□ -0.99
SNRNP40-202ENST00000373720 ALOX15P16050 662 aaPredicted RBP8.86□□□□□ -0.99
SNRNP40-202ENST00000373720 NFKB1P19838 968 aa8.86□□□□□ -0.99
SNRNP40-202ENST00000373720 HLA-DPA1P20036 260 aa8.86□□□□□ -0.99
SNRNP40-202ENST00000373720 ATP5C1P36542 298 aaKnown RBP8.86□□□□□ -0.99
SNRNP40-202ENST00000373720 ALDH7A1P49419 539 aaKnown RBP8.86□□□□□ -0.99
SNRNP40-202ENST00000373720 HARS2P49590 506 aaKnown RBP8.86□□□□□ -0.99
SNRNP40-202ENST00000373720 AFF1P51825 1210 aaKnown RBP8.86□□□□□ -0.99
SNRNP40-202ENST00000373720 OXCT1P55809 520 aa8.86□□□□□ -0.99
SNRNP40-202ENST00000373720 SESN2P58004 480 aaPredicted RBP8.86□□□□□ -0.99
SNRNP40-202ENST00000373720 POU4F1Q01851 419 aa8.86□□□□□ -0.99
SNRNP40-202ENST00000373720 OCRLQ01968 901 aa8.86□□□□□ -0.99
SNRNP40-202ENST00000373720 ZBTB16Q05516 673 aa8.86□□□□□ -0.99
SNRNP40-202ENST00000373720 GALNT1Q10472 559 aaPredicted RBP8.86□□□□□ -0.99
SNRNP40-202ENST00000373720 PLD1Q13393 1074 aa8.86□□□□□ -0.99
SNRNP40-202ENST00000373720 SERINC3Q13530 473 aa8.86□□□□□ -0.99
SNRNP40-202ENST00000373720 SLC12A1Q13621 1099 aa8.86□□□□□ -0.99
SNRNP40-202ENST00000373720 PABPC1LQ4VXU2 614 aaKnown RBP8.86□□□□□ -0.99
SNRNP40-202ENST00000373720 FSCBQ5H9T9 825 aa8.86□□□□□ -0.99
SNRNP40-202ENST00000373720 TEDDM1Q5T9Z0 273 aa8.86□□□□□ -0.99
SNRNP40-202ENST00000373720 MROH9Q5TGP6 573 aa8.86□□□□□ -0.99
SNRNP40-202ENST00000373720 FAM72AQ5TYM5 149 aa8.86□□□□□ -0.99
SNRNP40-202ENST00000373720 ALG1LQ6GMV1 187 aa8.86□□□□□ -0.99
SNRNP40-202ENST00000373720 FAM72DQ6L9T8 149 aa8.86□□□□□ -0.99
SNRNP40-202ENST00000373720 CLNKQ7Z7G1 428 aa8.86□□□□□ -0.99
SNRNP40-202ENST00000373720 SCD5Q86SK9 330 aa8.86□□□□□ -0.99
SNRNP40-202ENST00000373720 PRPF39Q86UA1 669 aaKnown RBP8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms