RNA–Protein interactions for RNA: ENST00000372244.3

TMEM53-205, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-205ENST00000372244 ALOX15BO15296 676 aa20.47■□□□□ 0.87
TMEM53-205ENST00000372244 LRCH4O75427 683 aa20.47■□□□□ 0.87
TMEM53-205ENST00000372244 ADH1BP00325 375 aa20.47■□□□□ 0.87
TMEM53-205ENST00000372244 ACVRL1P37023 503 aa20.47■□□□□ 0.87
TMEM53-205ENST00000372244 GALCP54803 685 aa20.47■□□□□ 0.87
TMEM53-205ENST00000372244 ARF5P84085 180 aa20.47■□□□□ 0.87
TMEM53-205ENST00000372244 SLC18A3Q16572 532 aa20.47■□□□□ 0.87
TMEM53-205ENST00000372244 DUOXA1Q1HG43 343 aa20.47■□□□□ 0.87
TMEM53-205ENST00000372244 TRIM61Q5EBN2 209 aa20.47■□□□□ 0.87
TMEM53-205ENST00000372244 Q6ZVU0 165 aa20.47■□□□□ 0.87
TMEM53-205ENST00000372244 RABEPKQ7Z6M1 372 aa20.47■□□□□ 0.87
TMEM53-205ENST00000372244 AADATQ8N5Z0 425 aa20.47■□□□□ 0.87
TMEM53-205ENST00000372244 OR2A12Q8NGT7 310 aa20.47■□□□□ 0.87
TMEM53-205ENST00000372244 C1orf216Q8TAB5 229 aa20.47■□□□□ 0.87
TMEM53-205ENST00000372244 FAM131CQ96AQ9 280 aa20.47■□□□□ 0.87
TMEM53-205ENST00000372244 C6orf106Q9H6K1 298 aaPredicted RBP20.47■□□□□ 0.87
TMEM53-205ENST00000372244 CAPN10Q9HC96 672 aa20.47■□□□□ 0.87
TMEM53-205ENST00000372244 ABHD10Q9NUJ1 306 aa20.47■□□□□ 0.87
TMEM53-205ENST00000372244 CDV3Q9UKY7 258 aaKnown RBP20.47■□□□□ 0.87
TMEM53-205ENST00000372244 SARDHQ9UL12 918 aa20.47■□□□□ 0.87
TMEM53-205ENST00000372244 FZD4Q9ULV1 537 aa20.47■□□□□ 0.87
TMEM53-205ENST00000372244 NCKAP1Q9Y2A7 1128 aa20.47■□□□□ 0.87
TMEM53-205ENST00000372244 KNL1Q8NG31 2342 aa20.47■□□□□ 0.87
TMEM53-205ENST00000372244 CEP192Q8TEP8 1941 aa20.47■□□□□ 0.87
TMEM53-205ENST00000372244 TNRC6BQ9UPQ9 1833 aaKnown RBP20.47■□□□□ 0.87
TMEM53-205ENST00000372244 TM4SF5O14894 197 aa20.46■□□□□ 0.87
TMEM53-205ENST00000372244 CREB3O43889 395 aa20.46■□□□□ 0.87
TMEM53-205ENST00000372244 MFAP3LO75121 409 aa20.46■□□□□ 0.87
TMEM53-205ENST00000372244 SEMA4FO95754 770 aa20.46■□□□□ 0.87
TMEM53-205ENST00000372244 SERPINF2P08697 491 aa20.46■□□□□ 0.87
TMEM53-205ENST00000372244 GOT1P17174 413 aa20.46■□□□□ 0.87
TMEM53-205ENST00000372244 MAOBP27338 520 aa20.46■□□□□ 0.87
TMEM53-205ENST00000372244 ADKP55263 362 aaKnown RBP20.46■□□□□ 0.87
TMEM53-205ENST00000372244 GFPT1Q06210 699 aaPredicted RBP20.46■□□□□ 0.87
TMEM53-205ENST00000372244 POLD3Q15054 466 aaPredicted RBP20.46■□□□□ 0.87
TMEM53-205ENST00000372244 CA9Q16790 459 aa20.46■□□□□ 0.87
TMEM53-205ENST00000372244 DCAF12L1Q5VU92 463 aa20.46■□□□□ 0.87
TMEM53-205ENST00000372244 DSG4Q86SJ6 1040 aa20.46■□□□□ 0.87
TMEM53-205ENST00000372244 UMODL1-AS1Q8N2C9 162 aa20.46■□□□□ 0.87
TMEM53-205ENST00000372244 OR8D1Q8WZ84 308 aa20.46■□□□□ 0.87
TMEM53-205ENST00000372244 RTKNQ9BST9 563 aa20.46■□□□□ 0.87
TMEM53-205ENST00000372244 ZNHIT6Q9NWK9 470 aaKnown RBP20.46■□□□□ 0.87
TMEM53-205ENST00000372244 GPATCH2LQ9NWQ4 482 aa20.46■□□□□ 0.87
TMEM53-205ENST00000372244 AP4E1Q9UPM8 1137 aa20.46■□□□□ 0.87
TMEM53-205ENST00000372244 CACNA1EQ15878 2313 aa20.46■□□□□ 0.87
TMEM53-205ENST00000372244 ATXN2Q99700 1313 aaKnown RBP20.45■□□□□ 0.86
TMEM53-205ENST00000372244 CHD5Q8TDI0 1954 aa20.45■□□□□ 0.86
TMEM53-205ENST00000372244 A0A1W2PP55 124 aa20.45■□□□□ 0.86
TMEM53-205ENST00000372244 CDX4O14627 284 aaPredicted RBP20.45■□□□□ 0.86
TMEM53-205ENST00000372244 PRPSAP2O60256 369 aa20.45■□□□□ 0.86
TMEM53-205ENST00000372244 RAMP2O60895 175 aa20.45■□□□□ 0.86
TMEM53-205ENST00000372244 IL1BP01584 269 aa20.45■□□□□ 0.86
TMEM53-205ENST00000372244 TPM1P09493 284 aa20.45■□□□□ 0.86
TMEM53-205ENST00000372244 SERPINH1P50454 418 aaKnown RBP20.45■□□□□ 0.86
TMEM53-205ENST00000372244 PIGHQ14442 188 aaPredicted RBP20.45■□□□□ 0.86
TMEM53-205ENST00000372244 TSR1Q2NL82 804 aaKnown RBP20.45■□□□□ 0.86
TMEM53-205ENST00000372244 IL31Q6EBC2 164 aa20.45■□□□□ 0.86
TMEM53-205ENST00000372244 NIPA2Q8N8Q9 360 aa20.45■□□□□ 0.86
TMEM53-205ENST00000372244 ARHGEF26Q96DR7 871 aa20.45■□□□□ 0.86
TMEM53-205ENST00000372244 CHP1Q99653 195 aa20.45■□□□□ 0.86
TMEM53-205ENST00000372244 OMDQ99983 421 aa20.45■□□□□ 0.86
TMEM53-205ENST00000372244 SNRNP25Q9BV90 132 aaKnown RBP20.45■□□□□ 0.86
TMEM53-205ENST00000372244 NUP85Q9BW27 656 aa20.45■□□□□ 0.86
TMEM53-205ENST00000372244 CEP44Q9C0F1 390 aa20.45■□□□□ 0.86
TMEM53-205ENST00000372244 RBSNQ9H1K0 784 aa20.45■□□□□ 0.86
TMEM53-205ENST00000372244 CATSPERBQ9H7T0 1116 aa20.45■□□□□ 0.86
TMEM53-205ENST00000372244 SLC6A14Q9UN76 642 aa20.45■□□□□ 0.86
TMEM53-205ENST00000372244 ZBTB32Q9Y2Y4 487 aaPredicted RBP20.45■□□□□ 0.86
TMEM53-205ENST00000372244 SPTBN2O15020 2390 aa20.45■□□□□ 0.86
TMEM53-205ENST00000372244 FGF10O15520 208 aaPredicted RBP20.44■□□□□ 0.86
TMEM53-205ENST00000372244 KDELR3O43731 214 aa20.44■□□□□ 0.86
TMEM53-205ENST00000372244 RNASEH2AO75792 299 aaKnown RBP20.44■□□□□ 0.86
TMEM53-205ENST00000372244 DRD3P35462 400 aa20.44■□□□□ 0.86
TMEM53-205ENST00000372244 PSMD8P48556 350 aa20.44■□□□□ 0.86
TMEM53-205ENST00000372244 HCAR3P49019 387 aa20.44■□□□□ 0.86
TMEM53-205ENST00000372244 METAP1P53582 386 aa20.44■□□□□ 0.86
TMEM53-205ENST00000372244 YBEYP58557 167 aaPredicted RBP20.44■□□□□ 0.86
TMEM53-205ENST00000372244 STPG1Q5TH74 334 aa20.44■□□□□ 0.86
TMEM53-205ENST00000372244 FAM46CQ5VWP2 391 aa20.44■□□□□ 0.86
TMEM53-205ENST00000372244 PLPP6Q8IY26 295 aa20.44■□□□□ 0.86
TMEM53-205ENST00000372244 RGL4Q8IZJ4 473 aa20.44■□□□□ 0.86
TMEM53-205ENST00000372244 HDDC3Q8N4P3 179 aa20.44■□□□□ 0.86
TMEM53-205ENST00000372244 TMIEQ8NEW7 156 aa20.44■□□□□ 0.86
TMEM53-205ENST00000372244 GANCQ8TET4 914 aa20.44■□□□□ 0.86
TMEM53-205ENST00000372244 ISG20Q96AZ6 181 aaKnown RBP20.44■□□□□ 0.86
TMEM53-205ENST00000372244 NUSAP1Q9BXS6 441 aaKnown RBP20.44■□□□□ 0.86
TMEM53-205ENST00000372244 TRIM5Q9C035 493 aa20.44■□□□□ 0.86
TMEM53-205ENST00000372244 DHX35Q9H5Z1 703 aaKnown RBP20.44■□□□□ 0.86
TMEM53-205ENST00000372244 FARP1Q9Y4F1 1045 aaPredicted RBP20.44■□□□□ 0.86
TMEM53-205ENST00000372244 CTSLP07711 333 aa20.43■□□□□ 0.86
TMEM53-205ENST00000372244 IL1R2P27930 398 aa20.43■□□□□ 0.86
TMEM53-205ENST00000372244 BOLA3Q53S33 107 aa20.43■□□□□ 0.86
TMEM53-205ENST00000372244 DAB2IPQ5VWQ8 1189 aa20.43■□□□□ 0.86
TMEM53-205ENST00000372244 C22orf39Q6P5X5 142 aa20.43■□□□□ 0.86
TMEM53-205ENST00000372244 PIP4K2CQ8TBX8 421 aa20.43■□□□□ 0.86
TMEM53-205ENST00000372244 BIRC7Q96CA5 298 aa20.43■□□□□ 0.86
TMEM53-205ENST00000372244 KCTD15Q96SI1 283 aaPredicted RBP20.43■□□□□ 0.86
TMEM53-205ENST00000372244 DONSONQ9NYP3 566 aa20.43■□□□□ 0.86
TMEM53-205ENST00000372244 SUSD2Q9UGT4 822 aa20.43■□□□□ 0.86
TMEM53-205ENST00000372244 IP6K2Q9UHH9 426 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms