RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 ANKRD26Q9UPS8 1709 aa16.15■□□□□ 0.18
COL17A1-202ENST00000369733 NID2Q14112 1375 aa16.15■□□□□ 0.18
COL17A1-202ENST00000369733 DHRS12A0PJE2 317 aa16.15■□□□□ 0.18
COL17A1-202ENST00000369733 OR1G1P47890 313 aa16.15■□□□□ 0.18
COL17A1-202ENST00000369733 ALDH6A1Q02252 535 aaKnown RBP16.15■□□□□ 0.18
COL17A1-202ENST00000369733 CNTN1Q12860 1018 aa16.15■□□□□ 0.18
COL17A1-202ENST00000369733 BNIP2Q12982 314 aa16.15■□□□□ 0.18
COL17A1-202ENST00000369733 VPS72Q15906 364 aa16.15■□□□□ 0.18
COL17A1-202ENST00000369733 APOBEC3HQ6NTF7 200 aaKnown RBP16.15■□□□□ 0.18
COL17A1-202ENST00000369733 OLFML1Q6UWY5 402 aa16.15■□□□□ 0.18
COL17A1-202ENST00000369733 ZDHHC18Q9NUE0 388 aa16.15■□□□□ 0.18
COL17A1-202ENST00000369733 HACL1Q9UJ83 578 aa16.15■□□□□ 0.18
COL17A1-202ENST00000369733 SPATA31A5Q5VU36 1347 aa16.14■□□□□ 0.17
COL17A1-202ENST00000369733 SPATA31A7Q8IWB4 1347 aa16.14■□□□□ 0.17
COL17A1-202ENST00000369733 MGAT4DA6NG13 374 aa16.14■□□□□ 0.17
COL17A1-202ENST00000369733 RAD51BO15315 384 aa16.14■□□□□ 0.17
COL17A1-202ENST00000369733 SLC11A2P49281 568 aa16.14■□□□□ 0.17
COL17A1-202ENST00000369733 LSM3P62310 102 aaKnown RBP16.14■□□□□ 0.17
COL17A1-202ENST00000369733 ILF2Q12905 390 aaKnown RBP16.14■□□□□ 0.17
COL17A1-202ENST00000369733 TDRPQ86YL5 185 aa16.14■□□□□ 0.17
COL17A1-202ENST00000369733 TPD52L3Q96J77 140 aa16.14■□□□□ 0.17
COL17A1-202ENST00000369733 DEPDC7Q96QD5 511 aa16.14■□□□□ 0.17
COL17A1-202ENST00000369733 ZNF670Q9BS34 389 aa16.14■□□□□ 0.17
COL17A1-202ENST00000369733 HGH1Q9BTY7 390 aa16.14■□□□□ 0.17
COL17A1-202ENST00000369733 TMEM134Q9H6X4 195 aa16.14■□□□□ 0.17
COL17A1-202ENST00000369733 ADAM30Q9UKF2 790 aa16.14■□□□□ 0.17
COL17A1-202ENST00000369733 INVSQ9Y283 1065 aa16.14■□□□□ 0.17
COL17A1-202ENST00000369733 CRYL1Q9Y2S2 319 aa16.14■□□□□ 0.17
COL17A1-202ENST00000369733 MST1RQ04912 1400 aa16.14■□□□□ 0.17
COL17A1-202ENST00000369733 CD3EAPO15446 510 aaKnown RBP16.14■□□□□ 0.17
COL17A1-202ENST00000369733 SIN3BO75182 1162 aa16.14■□□□□ 0.17
COL17A1-202ENST00000369733 SEC22BO75396 215 aa16.14■□□□□ 0.17
COL17A1-202ENST00000369733 KRT6AP02538 564 aa16.14■□□□□ 0.17
COL17A1-202ENST00000369733 KRT6BP04259 564 aa16.14■□□□□ 0.17
COL17A1-202ENST00000369733 CCDC166P0CW27 439 aa16.14■□□□□ 0.17
COL17A1-202ENST00000369733 KRT6CP48668 564 aa16.14■□□□□ 0.17
COL17A1-202ENST00000369733 RENBPP51606 427 aa16.14■□□□□ 0.17
COL17A1-202ENST00000369733 SLC16A1P53985 500 aa16.14■□□□□ 0.17
COL17A1-202ENST00000369733 NANOGNBQ7Z5D8 188 aa16.14■□□□□ 0.17
COL17A1-202ENST00000369733 ENKURQ8TC29 256 aa16.14■□□□□ 0.17
COL17A1-202ENST00000369733 MFSD14AQ96MC6 490 aa16.14■□□□□ 0.17
COL17A1-202ENST00000369733 EBF2Q9HAK2 575 aa16.14■□□□□ 0.17
COL17A1-202ENST00000369733 ABCB10Q9NRK6 738 aa16.14■□□□□ 0.17
COL17A1-202ENST00000369733 DDX43Q9NXZ2 648 aaKnown RBP16.14■□□□□ 0.17
COL17A1-202ENST00000369733 VAV3Q9UKW4 847 aa16.14■□□□□ 0.17
COL17A1-202ENST00000369733 STXBP5LQ9Y2K9 1186 aa16.14■□□□□ 0.17
COL17A1-202ENST00000369733 FOXN2P32314 431 aa16.14■□□□□ 0.17
COL17A1-202ENST00000369733 HPCAP84074 193 aa16.14■□□□□ 0.17
COL17A1-202ENST00000369733 LY6KQ17RY6 165 aa16.14■□□□□ 0.17
COL17A1-202ENST00000369733 VSTM1Q6UX27 236 aa16.14■□□□□ 0.17
COL17A1-202ENST00000369733 PIWIL4Q7Z3Z4 852 aaKnown RBP16.14■□□□□ 0.17
COL17A1-202ENST00000369733 TBC1D19Q8N5T2 526 aa16.14■□□□□ 0.17
COL17A1-202ENST00000369733 DNERQ8NFT8 737 aa16.14■□□□□ 0.17
COL17A1-202ENST00000369733 CPT1BQ92523 772 aa16.14■□□□□ 0.17
COL17A1-202ENST00000369733 SMAD5Q99717 465 aaKnown RBP16.14■□□□□ 0.17
COL17A1-202ENST00000369733 SELENONQ9NZV5 590 aa16.14■□□□□ 0.17
COL17A1-202ENST00000369733 DSEQ9UL01 958 aa16.14■□□□□ 0.17
COL17A1-202ENST00000369733 BTN3A1O00481 513 aa16.14■□□□□ 0.17
COL17A1-202ENST00000369733 RPS6KA3P51812 740 aa16.14■□□□□ 0.17
COL17A1-202ENST00000369733 EFEMP1Q12805 493 aa16.14■□□□□ 0.17
COL17A1-202ENST00000369733 ZNF846Q147U1 533 aa16.14■□□□□ 0.17
COL17A1-202ENST00000369733 GLB1LQ6UWU2 654 aa16.14■□□□□ 0.17
COL17A1-202ENST00000369733 SAMD7Q7Z3H4 446 aa16.14■□□□□ 0.17
COL17A1-202ENST00000369733 SATL1Q86VE3 508 aa16.14■□□□□ 0.17
COL17A1-202ENST00000369733 CYP4Z1Q86W10 505 aa16.14■□□□□ 0.17
COL17A1-202ENST00000369733 C12orf56Q8IXR9 622 aa16.14■□□□□ 0.17
COL17A1-202ENST00000369733 C2orf69Q8N8R5 385 aa16.14■□□□□ 0.17
COL17A1-202ENST00000369733 KLHL23Q8NBE8 558 aa16.14■□□□□ 0.17
COL17A1-202ENST00000369733 PRDM5Q9NQX1 630 aaPredicted RBP16.14■□□□□ 0.17
COL17A1-202ENST00000369733 ENTPD7Q9NQZ7 604 aa16.14■□□□□ 0.17
COL17A1-202ENST00000369733 FAM25AB3EWG3 89 aa16.13■□□□□ 0.17
COL17A1-202ENST00000369733 FAM25CB3EWG5 89 aa16.13■□□□□ 0.17
COL17A1-202ENST00000369733 FAM25GB3EWG6 89 aa16.13■□□□□ 0.17
COL17A1-202ENST00000369733 ITGALP20701 1170 aa16.13■□□□□ 0.17
COL17A1-202ENST00000369733 PFKFB4Q16877 469 aa16.13■□□□□ 0.17
COL17A1-202ENST00000369733 CMC1Q7Z7K0 106 aa16.13■□□□□ 0.17
COL17A1-202ENST00000369733 TMEM132CQ8N3T6 1108 aa16.13■□□□□ 0.17
COL17A1-202ENST00000369733 OR5B17Q8NGF7 314 aa16.13■□□□□ 0.17
COL17A1-202ENST00000369733 TADA1Q96BN2 335 aa16.13■□□□□ 0.17
COL17A1-202ENST00000369733 DYRK4Q9NR20 520 aa16.13■□□□□ 0.17
COL17A1-202ENST00000369733 EURLQ9NYK6 297 aa16.13■□□□□ 0.17
COL17A1-202ENST00000369733 NBNO60934 754 aa16.13■□□□□ 0.17
COL17A1-202ENST00000369733 PEX2P28328 305 aa16.13■□□□□ 0.17
COL17A1-202ENST00000369733 CDC16Q13042 620 aa16.13■□□□□ 0.17
COL17A1-202ENST00000369733 NOL11Q9H8H0 719 aaKnown RBP16.13■□□□□ 0.17
COL17A1-202ENST00000369733 TMEM165Q9HC07 324 aa16.13■□□□□ 0.17
COL17A1-202ENST00000369733 DNAJC28Q9NX36 388 aa16.13■□□□□ 0.17
COL17A1-202ENST00000369733 CDH9Q9ULB4 789 aa16.13■□□□□ 0.17
COL17A1-202ENST00000369733 GNG14A0A1W2PPG7 69 aa16.13■□□□□ 0.17
COL17A1-202ENST00000369733 RAB10P61026 200 aa16.13■□□□□ 0.17
COL17A1-202ENST00000369733 CNPY1Q3B7I2 92 aa16.13■□□□□ 0.17
COL17A1-202ENST00000369733 TYW3Q6IPR3 259 aaKnown RBP16.13■□□□□ 0.17
COL17A1-202ENST00000369733 MILR1Q7Z6M3 343 aa16.13■□□□□ 0.17
COL17A1-202ENST00000369733 POC5Q8NA72 575 aa16.13■□□□□ 0.17
COL17A1-202ENST00000369733 PSMA8Q8TAA3 256 aa16.13■□□□□ 0.17
COL17A1-202ENST00000369733 S100ZQ8WXG8 99 aa16.13■□□□□ 0.17
COL17A1-202ENST00000369733 MRPL57Q9BQC6 102 aaKnown RBP16.13■□□□□ 0.17
COL17A1-202ENST00000369733 EBF3Q9H4W6 596 aa16.13■□□□□ 0.17
COL17A1-202ENST00000369733 DHX33Q9H6R0 707 aaKnown RBP16.13■□□□□ 0.17
COL17A1-202ENST00000369733 WDR55Q9H6Y2 383 aaPredicted RBP16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms