RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 MTFMTQ96DP5 389 aaKnown RBP11.77□□□□□ -0.53
SYNE1-204ENST00000367248 CPNE1Q99829 537 aa11.77□□□□□ -0.53
SYNE1-204ENST00000367248 EVA1BQ9NVM1 165 aa11.77□□□□□ -0.53
SYNE1-204ENST00000367248 HEY2Q9UBP5 337 aa11.77□□□□□ -0.53
SYNE1-204ENST00000367248 MSI1O43347 362 aaKnown RBP11.77□□□□□ -0.53
SYNE1-204ENST00000367248 CST3P01034 146 aaPredicted RBP11.77□□□□□ -0.53
SYNE1-204ENST00000367248 C4BPAP04003 597 aaKnown RBP11.77□□□□□ -0.53
SYNE1-204ENST00000367248 CYP2A7P20853 494 aa11.77□□□□□ -0.53
SYNE1-204ENST00000367248 PTPN3P26045 913 aa11.77□□□□□ -0.53
SYNE1-204ENST00000367248 CRABP2P29373 138 aa11.77□□□□□ -0.53
SYNE1-204ENST00000367248 PBX1P40424 430 aa11.77□□□□□ -0.53
SYNE1-204ENST00000367248 AQP5P55064 265 aa11.77□□□□□ -0.53
SYNE1-204ENST00000367248 MAXP61244 160 aa11.77□□□□□ -0.53
SYNE1-204ENST00000367248 DEC1Q9P2X7 70 aa11.77□□□□□ -0.53
SYNE1-204ENST00000367248 SOX13Q9UN79 622 aa11.77□□□□□ -0.53
SYNE1-204ENST00000367248 MAT2AP31153 395 aaKnown RBP11.76□□□□□ -0.53
SYNE1-204ENST00000367248 ADRA1BP35368 520 aa11.76□□□□□ -0.53
SYNE1-204ENST00000367248 PSMD8P48556 350 aa11.76□□□□□ -0.53
SYNE1-204ENST00000367248 HSPA14Q0VDF9 509 aa11.76□□□□□ -0.53
SYNE1-204ENST00000367248 INTS6LQ5JSJ4 861 aaKnown RBP11.76□□□□□ -0.53
SYNE1-204ENST00000367248 SCARA3Q6AZY7 606 aa11.76□□□□□ -0.53
SYNE1-204ENST00000367248 PRELID2Q8N945 189 aa11.76□□□□□ -0.53
SYNE1-204ENST00000367248 PHF21BQ96EK2 531 aa11.76□□□□□ -0.53
SYNE1-204ENST00000367248 PLEKHA8Q96JA3 519 aa11.76□□□□□ -0.53
SYNE1-204ENST00000367248 SEMA3CQ99985 751 aa11.76□□□□□ -0.53
SYNE1-204ENST00000367248 BGNP21810 368 aa11.76□□□□□ -0.53
SYNE1-204ENST00000367248 AIF1P55008 147 aa11.76□□□□□ -0.53
SYNE1-204ENST00000367248 PLA2G4EQ3MJ16 856 aa11.76□□□□□ -0.53
SYNE1-204ENST00000367248 TRIM60Q495X7 471 aa11.76□□□□□ -0.53
SYNE1-204ENST00000367248 FBXO39Q8N4B4 442 aa11.76□□□□□ -0.53
SYNE1-204ENST00000367248 OR52K1Q8NGK4 314 aa11.76□□□□□ -0.53
SYNE1-204ENST00000367248 OR14C36Q8NHC7 312 aa11.76□□□□□ -0.53
SYNE1-204ENST00000367248 DTX3LQ8TDB6 740 aa11.76□□□□□ -0.53
SYNE1-204ENST00000367248 NDRG1Q92597 394 aaKnown RBP11.76□□□□□ -0.53
SYNE1-204ENST00000367248 COL26A1Q96A83 441 aa11.76□□□□□ -0.53
SYNE1-204ENST00000367248 RIPOR3Q96MK2 946 aa11.76□□□□□ -0.53
SYNE1-204ENST00000367248 THUMPD3Q9BV44 507 aaKnown RBP11.76□□□□□ -0.53
SYNE1-204ENST00000367248 CDHR5Q9HBB8 845 aa11.76□□□□□ -0.53
SYNE1-204ENST00000367248 TXNRD2Q9NNW7 524 aa11.76□□□□□ -0.53
SYNE1-204ENST00000367248 RNF186Q9NXI6 227 aa11.76□□□□□ -0.53
SYNE1-204ENST00000367248 IFNA16P05015 189 aa11.76□□□□□ -0.53
SYNE1-204ENST00000367248 HTR1BP28222 390 aa11.76□□□□□ -0.53
SYNE1-204ENST00000367248 CLCNKBP51801 687 aa11.76□□□□□ -0.53
SYNE1-204ENST00000367248 ACTN3Q08043 901 aaPredicted RBP11.76□□□□□ -0.53
SYNE1-204ENST00000367248 UAP1L1Q3KQV9 507 aa11.76□□□□□ -0.53
SYNE1-204ENST00000367248 CRTC3Q6UUV7 619 aa11.76□□□□□ -0.53
SYNE1-204ENST00000367248 CPA6Q8N4T0 437 aa11.76□□□□□ -0.53
SYNE1-204ENST00000367248 NTPCRQ9BSD7 190 aaKnown RBP11.76□□□□□ -0.53
SYNE1-204ENST00000367248 CREBZFQ9NS37 354 aa11.76□□□□□ -0.53
SYNE1-204ENST00000367248 ZNF112Q9UJU3 913 aa11.76□□□□□ -0.53
SYNE1-204ENST00000367248 CHADO15335 359 aa11.76□□□□□ -0.53
SYNE1-204ENST00000367248 NRSN1Q8IZ57 195 aa11.76□□□□□ -0.53
SYNE1-204ENST00000367248 ALLCQ8N6M5 410 aa11.76□□□□□ -0.53
SYNE1-204ENST00000367248 MPP6Q9NZW5 540 aa11.76□□□□□ -0.53
SYNE1-204ENST00000367248 THRAP10827 490 aa11.76□□□□□ -0.53
SYNE1-204ENST00000367248 CCNB1P14635 433 aa11.76□□□□□ -0.53
SYNE1-204ENST00000367248 CD86P42081 329 aa11.76□□□□□ -0.53
SYNE1-204ENST00000367248 VN1R5Q7Z5H4 357 aa11.76□□□□□ -0.53
SYNE1-204ENST00000367248 METTL3Q86U44 580 aaKnown RBP11.76□□□□□ -0.53
SYNE1-204ENST00000367248 COLGALT2Q8IYK4 626 aa11.76□□□□□ -0.53
SYNE1-204ENST00000367248 C12orf50Q8NA57 414 aaPredicted RBP11.76□□□□□ -0.53
SYNE1-204ENST00000367248 MYCBPAPQ8TBZ2 947 aa11.76□□□□□ -0.53
SYNE1-204ENST00000367248 MLPHQ9BV36 600 aaPredicted RBP11.76□□□□□ -0.53
SYNE1-204ENST00000367248 GDF3Q9NR23 364 aa11.76□□□□□ -0.53
SYNE1-204ENST00000367248 SERPINE1P05121 402 aa11.75□□□□□ -0.53
SYNE1-204ENST00000367248 TAS2R40P59535 323 aa11.75□□□□□ -0.53
SYNE1-204ENST00000367248 ARHGAP1Q07960 439 aa11.75□□□□□ -0.53
SYNE1-204ENST00000367248 PLEKHA7Q6IQ23 1121 aa11.75□□□□□ -0.53
SYNE1-204ENST00000367248 STRADAQ7RTN6 431 aa11.75□□□□□ -0.53
SYNE1-204ENST00000367248 STK40Q8N2I9 435 aa11.75□□□□□ -0.53
SYNE1-204ENST00000367248 SNX27Q96L92 541 aa11.75□□□□□ -0.53
SYNE1-204ENST00000367248 ECSITQ9BQ95 431 aa11.75□□□□□ -0.53
SYNE1-204ENST00000367248 B3GNT5Q9BYG0 378 aa11.75□□□□□ -0.53
SYNE1-204ENST00000367248 TRIM4Q9C037 500 aa11.75□□□□□ -0.53
SYNE1-204ENST00000367248 IL22Q9GZX6 179 aa11.75□□□□□ -0.53
SYNE1-204ENST00000367248 MIEF1Q9NQG6 463 aa11.75□□□□□ -0.53
SYNE1-204ENST00000367248 UBXN8O00124 270 aa11.75□□□□□ -0.53
SYNE1-204ENST00000367248 PDE2AO00408 941 aaPredicted RBP11.75□□□□□ -0.53
SYNE1-204ENST00000367248 RAD51BO15315 384 aa11.75□□□□□ -0.53
SYNE1-204ENST00000367248 FLT3P36888 993 aa11.75□□□□□ -0.53
SYNE1-204ENST00000367248 C2orf27AQ580R0 203 aa11.75□□□□□ -0.53
SYNE1-204ENST00000367248 CPXM1Q96SM3 734 aa11.75□□□□□ -0.53
SYNE1-204ENST00000367248 LGMNQ99538 433 aa11.75□□□□□ -0.53
SYNE1-204ENST00000367248 NLNQ9BYT8 704 aa11.75□□□□□ -0.53
SYNE1-204ENST00000367248 LRRC19Q9H756 370 aa11.75□□□□□ -0.53
SYNE1-204ENST00000367248 N6AMT1Q9Y5N5 214 aa11.75□□□□□ -0.53
SYNE1-204ENST00000367248 PEX19P40855 299 aa11.75□□□□□ -0.53
SYNE1-204ENST00000367248 CCR4P51679 360 aa11.75□□□□□ -0.53
SYNE1-204ENST00000367248 FAAP100Q0VG06 881 aa11.75□□□□□ -0.53
SYNE1-204ENST00000367248 GDF6Q6KF10 455 aaPredicted RBP11.75□□□□□ -0.53
SYNE1-204ENST00000367248 KIF2BQ8N4N8 673 aa11.75□□□□□ -0.53
SYNE1-204ENST00000367248 PGM2Q96G03 612 aa11.75□□□□□ -0.53
SYNE1-204ENST00000367248 APOPT1Q96IL0 206 aa11.75□□□□□ -0.53
SYNE1-204ENST00000367248 ZMYM5Q9UJ78 669 aa11.75□□□□□ -0.53
SYNE1-204ENST00000367248 FAM153BP0C7A2 387 aa11.75□□□□□ -0.53
SYNE1-204ENST00000367248 TYMPP19971 482 aa11.75□□□□□ -0.53
SYNE1-204ENST00000367248 NUDT2P50583 147 aa11.75□□□□□ -0.53
SYNE1-204ENST00000367248 CNTN1Q12860 1018 aa11.75□□□□□ -0.53
SYNE1-204ENST00000367248 PKN2Q16513 984 aaKnown RBP11.75□□□□□ -0.53
SYNE1-204ENST00000367248 FAM153CQ494X1 144 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms