RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 CLIC5Q9NZA1 410 aa4.03□□□□□ -1.76
RNU6-28P-201ENST00000362378 IL1RAPL1Q9NZN1 696 aa4.03□□□□□ -1.76
RNU6-28P-201ENST00000362378 ARPP21Q9UBL0 812 aaPredicted RBP4.03□□□□□ -1.76
RNU6-28P-201ENST00000362378 FBXO40Q9UH90 709 aa4.03□□□□□ -1.76
RNU6-28P-201ENST00000362378 TLK1Q9UKI8 766 aa4.03□□□□□ -1.76
RNU6-28P-201ENST00000362378 TNFSF13BQ9Y275 285 aa4.03□□□□□ -1.76
RNU6-28P-201ENST00000362378 WNT6Q9Y6F9 365 aa4.03□□□□□ -1.76
RNU6-28P-201ENST00000362378 RPS6KL1Q9Y6S9 549 aa4.03□□□□□ -1.76
RNU6-28P-201ENST00000362378 TEX13CA0A0J9YWL9 993 aa4.02□□□□□ -1.77
RNU6-28P-201ENST00000362378 LDLRAD4O15165 306 aa4.02□□□□□ -1.77
RNU6-28P-201ENST00000362378 STRNO43815 780 aa4.02□□□□□ -1.77
RNU6-28P-201ENST00000362378 CEP104O60308 925 aa4.02□□□□□ -1.77
RNU6-28P-201ENST00000362378 USP12O75317 370 aa4.02□□□□□ -1.77
RNU6-28P-201ENST00000362378 SEC14L2O76054 403 aa4.02□□□□□ -1.77
RNU6-28P-201ENST00000362378 PLAUP00749 431 aa4.02□□□□□ -1.77
RNU6-28P-201ENST00000362378 SERPINC1P01008 464 aa4.02□□□□□ -1.77
RNU6-28P-201ENST00000362378 NHLRC4P0CG21 123 aaPredicted RBP4.02□□□□□ -1.77
RNU6-28P-201ENST00000362378 CYP2A6P11509 494 aaPredicted RBP4.02□□□□□ -1.77
RNU6-28P-201ENST00000362378 ST6GAL1P15907 406 aa4.02□□□□□ -1.77
RNU6-28P-201ENST00000362378 ALOX12P18054 663 aa4.02□□□□□ -1.77
RNU6-28P-201ENST00000362378 TNFRSF1AP19438 455 aa4.02□□□□□ -1.77
RNU6-28P-201ENST00000362378 CD72P21854 359 aa4.02□□□□□ -1.77
RNU6-28P-201ENST00000362378 HOXA7P31268 230 aaPredicted RBP4.02□□□□□ -1.77
RNU6-28P-201ENST00000362378 ICAM3P32942 547 aa4.02□□□□□ -1.77
RNU6-28P-201ENST00000362378 HOXD13P35453 343 aa4.02□□□□□ -1.77
RNU6-28P-201ENST00000362378 ARL3P36405 182 aa4.02□□□□□ -1.77
RNU6-28P-201ENST00000362378 MLH1P40692 756 aa4.02□□□□□ -1.77
RNU6-28P-201ENST00000362378 PTPN9P43378 593 aa4.02□□□□□ -1.77
RNU6-28P-201ENST00000362378 CLK3P49761 638 aaKnown RBP4.02□□□□□ -1.77
RNU6-28P-201ENST00000362378 BLKP51451 505 aa4.02□□□□□ -1.77
RNU6-28P-201ENST00000362378 CYP4A11Q02928 519 aa4.02□□□□□ -1.77
RNU6-28P-201ENST00000362378 MTA1Q13330 715 aa4.02□□□□□ -1.77
RNU6-28P-201ENST00000362378 TOMM20Q15388 145 aa4.02□□□□□ -1.77
RNU6-28P-201ENST00000362378 FBXO43Q4G163 708 aa4.02□□□□□ -1.77
RNU6-28P-201ENST00000362378 ARL13AQ5H913 290 aaPredicted RBP4.02□□□□□ -1.77
RNU6-28P-201ENST00000362378 KIAA1755Q5JYT7 1200 aa4.02□□□□□ -1.77
RNU6-28P-201ENST00000362378 SUMO4Q6EEV6 95 aa4.02□□□□□ -1.77
RNU6-28P-201ENST00000362378 ZNF813Q6ZN06 617 aa4.02□□□□□ -1.77
RNU6-28P-201ENST00000362378 CCDC129Q6ZRS4 1044 aa4.02□□□□□ -1.77
RNU6-28P-201ENST00000362378 LDLRAD3Q86YD5 345 aa4.02□□□□□ -1.77
RNU6-28P-201ENST00000362378 CCDC105Q8IYK2 499 aa4.02□□□□□ -1.77
RNU6-28P-201ENST00000362378 TMEM217Q8N7C4 229 aa4.02□□□□□ -1.77
RNU6-28P-201ENST00000362378 BCAS4Q8TDM0 211 aa4.02□□□□□ -1.77
RNU6-28P-201ENST00000362378 IP6K1Q92551 441 aa4.02□□□□□ -1.77
RNU6-28P-201ENST00000362378 PIGKQ92643 395 aa4.02□□□□□ -1.77
RNU6-28P-201ENST00000362378 USP6NLQ92738 828 aa4.02□□□□□ -1.77
RNU6-28P-201ENST00000362378 KAT2BQ92831 832 aa4.02□□□□□ -1.77
RNU6-28P-201ENST00000362378 NSUN4Q96CB9 384 aaKnown RBP4.02□□□□□ -1.77
RNU6-28P-201ENST00000362378 KLHL29Q96CT2 875 aa4.02□□□□□ -1.77
RNU6-28P-201ENST00000362378 ASB2Q96Q27 587 aa4.02□□□□□ -1.77
RNU6-28P-201ENST00000362378 TEFMQ96QE5 360 aaKnown RBP4.02□□□□□ -1.77
RNU6-28P-201ENST00000362378 CCDC68Q9H2F9 335 aa4.02□□□□□ -1.77
RNU6-28P-201ENST00000362378 PCDHB16Q9NRJ7 776 aa4.02□□□□□ -1.77
RNU6-28P-201ENST00000362378 ATP8A2Q9NTI2 1148 aa4.02□□□□□ -1.77
RNU6-28P-201ENST00000362378 PEMTQ9UBM1 199 aa4.02□□□□□ -1.77
RNU6-28P-201ENST00000362378 HSPB7Q9UBY9 170 aa4.02□□□□□ -1.77
RNU6-28P-201ENST00000362378 FBXO4Q9UKT5 387 aa4.02□□□□□ -1.77
RNU6-28P-201ENST00000362378 ICKQ9UPZ9 632 aa4.02□□□□□ -1.77
RNU6-28P-201ENST00000362378 DHDHQ9UQ10 334 aa4.02□□□□□ -1.77
RNU6-28P-201ENST00000362378 RSF1Q96T23 1441 aaPredicted RBP4.02□□□□□ -1.77
RNU6-28P-201ENST00000362378 AOX1Q06278 1338 aa4.01□□□□□ -1.77
RNU6-28P-201ENST00000362378 PABPN1LA6NDY0 278 aaKnown RBP4.01□□□□□ -1.77
RNU6-28P-201ENST00000362378 B8ZZF3 427 aa4.01□□□□□ -1.77
RNU6-28P-201ENST00000362378 SMIM22K7EJ46 135 aa4.01□□□□□ -1.77
RNU6-28P-201ENST00000362378 TAF4O00268 1085 aa4.01□□□□□ -1.77
RNU6-28P-201ENST00000362378 INPPL1O15357 1258 aa4.01□□□□□ -1.77
RNU6-28P-201ENST00000362378 FIBPO43427 364 aa4.01□□□□□ -1.77
RNU6-28P-201ENST00000362378 DDAH2O95865 285 aa4.01□□□□□ -1.77
RNU6-28P-201ENST00000362378 ADAP00813 363 aa4.01□□□□□ -1.77
RNU6-28P-201ENST00000362378 TFEBP19484 476 aa4.01□□□□□ -1.77
RNU6-28P-201ENST00000362378 TACR2P21452 398 aa4.01□□□□□ -1.77
RNU6-28P-201ENST00000362378 CPOXP36551 454 aa4.01□□□□□ -1.77
RNU6-28P-201ENST00000362378 SKIV2L2P42285 1042 aaKnown RBP4.01□□□□□ -1.77
RNU6-28P-201ENST00000362378 RARSP54136 660 aaKnown RBP4.01□□□□□ -1.77
RNU6-28P-201ENST00000362378 NEXNQ0ZGT2 675 aa4.01□□□□□ -1.77
RNU6-28P-201ENST00000362378 C5orf22Q49AR2 442 aa4.01□□□□□ -1.77
RNU6-28P-201ENST00000362378 FAM171A1Q5VUB5 890 aa4.01□□□□□ -1.77
RNU6-28P-201ENST00000362378 TMEM268Q5VZI3 342 aa4.01□□□□□ -1.77
RNU6-28P-201ENST00000362378 OLFML1Q6UWY5 402 aa4.01□□□□□ -1.77
RNU6-28P-201ENST00000362378 IL20RBQ6UXL0 311 aa4.01□□□□□ -1.77
RNU6-28P-201ENST00000362378 PRSS45Q7RTY3 260 aa4.01□□□□□ -1.77
RNU6-28P-201ENST00000362378 RPAP2Q8IXW5 612 aaPredicted RBP4.01□□□□□ -1.77
RNU6-28P-201ENST00000362378 Q8N1X5 172 aa4.01□□□□□ -1.77
RNU6-28P-201ENST00000362378 GHDCQ8N2G8 530 aa4.01□□□□□ -1.77
RNU6-28P-201ENST00000362378 ARL14EPQ8N8R7 260 aaPredicted RBP4.01□□□□□ -1.77
RNU6-28P-201ENST00000362378 PNLDC1Q8NA58 520 aaKnown RBP4.01□□□□□ -1.77
RNU6-28P-201ENST00000362378 HDAC7Q8WUI4 952 aa4.01□□□□□ -1.77
RNU6-28P-201ENST00000362378 PERPQ96FX8 193 aa4.01□□□□□ -1.77
RNU6-28P-201ENST00000362378 SERINC2Q96SA4 455 aa4.01□□□□□ -1.77
RNU6-28P-201ENST00000362378 PIP5K1AQ99755 562 aa4.01□□□□□ -1.77
RNU6-28P-201ENST00000362378 SLC32A1Q9H598 525 aa4.01□□□□□ -1.77
RNU6-28P-201ENST00000362378 ENTPD7Q9NQZ7 604 aa4.01□□□□□ -1.77
RNU6-28P-201ENST00000362378 GRHL1Q9NZI5 618 aa4.01□□□□□ -1.77
RNU6-28P-201ENST00000362378 NLKQ9UBE8 527 aa4.01□□□□□ -1.77
RNU6-28P-201ENST00000362378 TBC1D29Q9UFV1 150 aa4.01□□□□□ -1.77
RNU6-28P-201ENST00000362378 POLG2Q9UHN1 485 aa4.01□□□□□ -1.77
RNU6-28P-201ENST00000362378 VPS28Q9UK41 221 aa4.01□□□□□ -1.77
RNU6-28P-201ENST00000362378 TTLL3Q9Y4R7 772 aa4.01□□□□□ -1.77
RNU6-28P-201ENST00000362378 LYVE1Q9Y5Y7 322 aa4.01□□□□□ -1.77
RNU6-28P-201ENST00000362378 MST1RQ04912 1400 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms