RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 TWF1Q12792 350 aa14.11□□□□□ -0.15
COL6A1-201ENST00000361866 ZRANB3Q5FWF4 1079 aa14.11□□□□□ -0.15
COL6A1-201ENST00000361866 FBXO27Q8NI29 283 aa14.11□□□□□ -0.15
COL6A1-201ENST00000361866 DLG3Q92796 817 aa14.11□□□□□ -0.15
COL6A1-201ENST00000361866 CCDC126Q96EE4 140 aa14.11□□□□□ -0.15
COL6A1-201ENST00000361866 RSL24D1Q9UHA3 163 aaKnown RBP14.11□□□□□ -0.15
COL6A1-201ENST00000361866 MYO18AQ92614 2054 aaKnown RBP14.11□□□□□ -0.15
COL6A1-201ENST00000361866 MAGEB16A2A368 324 aa14.11□□□□□ -0.15
COL6A1-201ENST00000361866 CASTOR2A6NHX0 329 aa14.11□□□□□ -0.15
COL6A1-201ENST00000361866 SETD1AO15047 1707 aaKnown RBP14.11□□□□□ -0.15
COL6A1-201ENST00000361866 ARF4P18085 180 aaPredicted RBP14.11□□□□□ -0.15
COL6A1-201ENST00000361866 PCSK1P29120 753 aa14.11□□□□□ -0.15
COL6A1-201ENST00000361866 RAB27AP51159 221 aa14.11□□□□□ -0.15
COL6A1-201ENST00000361866 OLIG2Q13516 323 aa14.11□□□□□ -0.15
COL6A1-201ENST00000361866 ATP6AP1LQ52LC2 224 aa14.11□□□□□ -0.15
COL6A1-201ENST00000361866 KIAA1841Q6NSI8 718 aa14.11□□□□□ -0.15
COL6A1-201ENST00000361866 ILDR2Q71H61 639 aa14.11□□□□□ -0.15
COL6A1-201ENST00000361866 BNIPLQ7Z465 357 aa14.11□□□□□ -0.15
COL6A1-201ENST00000361866 SNX19Q92543 992 aa14.11□□□□□ -0.15
COL6A1-201ENST00000361866 MOCOSQ96EN8 888 aa14.11□□□□□ -0.15
COL6A1-201ENST00000361866 FAM210AQ96ND0 272 aa14.11□□□□□ -0.15
COL6A1-201ENST00000361866 RPRD1AQ96P16 312 aaPredicted RBP14.11□□□□□ -0.15
COL6A1-201ENST00000361866 KCTD14Q9BQ13 255 aaPredicted RBP14.11□□□□□ -0.15
COL6A1-201ENST00000361866 ASPSCR1Q9BZE9 553 aa14.11□□□□□ -0.15
COL6A1-201ENST00000361866 TNFSF13BQ9Y275 285 aa14.11□□□□□ -0.15
COL6A1-201ENST00000361866 IQCA1LA6NCM1 817 aa14.11□□□□□ -0.15
COL6A1-201ENST00000361866 ZNF460Q14592 562 aa14.11□□□□□ -0.15
COL6A1-201ENST00000361866 PFKFB4Q16877 469 aa14.11□□□□□ -0.15
COL6A1-201ENST00000361866 LSM12Q3MHD2 195 aaKnown RBP14.11□□□□□ -0.15
COL6A1-201ENST00000361866 OR52K2Q8NGK3 314 aa14.11□□□□□ -0.15
COL6A1-201ENST00000361866 MRGBPQ9NV56 204 aa14.11□□□□□ -0.15
COL6A1-201ENST00000361866 FAM50BQ9Y247 325 aa14.11□□□□□ -0.15
COL6A1-201ENST00000361866 CILPO75339 1184 aa14.1□□□□□ -0.15
COL6A1-201ENST00000361866 DAB1O75553 588 aa14.1□□□□□ -0.15
COL6A1-201ENST00000361866 TRMUO75648 421 aaKnown RBP14.1□□□□□ -0.15
COL6A1-201ENST00000361866 MYCP01106 439 aaPredicted RBP14.1□□□□□ -0.15
COL6A1-201ENST00000361866 LDLRP01130 860 aa14.1□□□□□ -0.15
COL6A1-201ENST00000361866 LSM3P62310 102 aaKnown RBP14.1□□□□□ -0.15
COL6A1-201ENST00000361866 PLCL1Q15111 1095 aa14.1□□□□□ -0.15
COL6A1-201ENST00000361866 SLC9B1Q4ZJI4 515 aa14.1□□□□□ -0.15
COL6A1-201ENST00000361866 FBXO48Q5FWF7 155 aa14.1□□□□□ -0.15
COL6A1-201ENST00000361866 ZNF484Q5JVG2 852 aa14.1□□□□□ -0.15
COL6A1-201ENST00000361866 PERM1Q5SV97 790 aa14.1□□□□□ -0.15
COL6A1-201ENST00000361866 LIPMQ5VYY2 423 aa14.1□□□□□ -0.15
COL6A1-201ENST00000361866 SZRD1Q7Z422 152 aa14.1□□□□□ -0.15
COL6A1-201ENST00000361866 GIPC3Q8TF64 312 aa14.1□□□□□ -0.15
COL6A1-201ENST00000361866 CLEC4CQ8WTT0 213 aa14.1□□□□□ -0.15
COL6A1-201ENST00000361866 PCDHAC1Q9H158 963 aa14.1□□□□□ -0.15
COL6A1-201ENST00000361866 PKP3Q9Y446 797 aa14.1□□□□□ -0.15
COL6A1-201ENST00000361866 HACD1B0YJ81 288 aa14.1□□□□□ -0.15
COL6A1-201ENST00000361866 TRIM38O00635 465 aa14.1□□□□□ -0.15
COL6A1-201ENST00000361866 LTFP02788 710 aa14.1□□□□□ -0.15
COL6A1-201ENST00000361866 CPB1P15086 417 aa14.1□□□□□ -0.15
COL6A1-201ENST00000361866 SERPINB10P48595 397 aa14.1□□□□□ -0.15
COL6A1-201ENST00000361866 EIF2B2P49770 351 aaKnown RBP14.1□□□□□ -0.15
COL6A1-201ENST00000361866 GRIK3Q13003 919 aa14.1□□□□□ -0.15
COL6A1-201ENST00000361866 DMC1Q14565 340 aa14.1□□□□□ -0.15
COL6A1-201ENST00000361866 FSTL4Q6MZW2 842 aa14.1□□□□□ -0.15
COL6A1-201ENST00000361866 CCDC185Q8N715 623 aa14.1□□□□□ -0.15
COL6A1-201ENST00000361866 ENDOVQ8N8Q3 282 aaKnown RBP14.1□□□□□ -0.15
COL6A1-201ENST00000361866 FIG4Q92562 907 aa14.1□□□□□ -0.15
COL6A1-201ENST00000361866 WNT8BQ93098 351 aa14.1□□□□□ -0.15
COL6A1-201ENST00000361866 RTKNQ9BST9 563 aa14.1□□□□□ -0.15
COL6A1-201ENST00000361866 GOLGA2P5Q9HBQ8 144 aa14.1□□□□□ -0.15
COL6A1-201ENST00000361866 EXOSC4Q9NPD3 245 aaKnown RBP14.1□□□□□ -0.15
COL6A1-201ENST00000361866 SCHIP1Q9P0W5 487 aaPredicted RBP14.1□□□□□ -0.15
COL6A1-201ENST00000361866 ZNF180Q9UJW8 692 aa14.1□□□□□ -0.15
COL6A1-201ENST00000361866 C2CD4BA6NLJ0 364 aa14.1□□□□□ -0.15
COL6A1-201ENST00000361866 ESRRBO95718 433 aa14.1□□□□□ -0.15
COL6A1-201ENST00000361866 SNRPB2P08579 225 aaKnown RBP14.1□□□□□ -0.15
COL6A1-201ENST00000361866 PNPLA4P41247 253 aa14.1□□□□□ -0.15
COL6A1-201ENST00000361866 NPY2RP49146 381 aa14.1□□□□□ -0.15
COL6A1-201ENST00000361866 DGCR6Q14129 220 aa14.1□□□□□ -0.15
COL6A1-201ENST00000361866 MRNIPQ6NTE8 343 aa14.1□□□□□ -0.15
COL6A1-201ENST00000361866 SAPCD2Q86UD0 394 aa14.1□□□□□ -0.15
COL6A1-201ENST00000361866 ERO1BQ86YB8 467 aa14.1□□□□□ -0.15
COL6A1-201ENST00000361866 C18orf25Q96B23 403 aaPredicted RBP14.1□□□□□ -0.15
COL6A1-201ENST00000361866 NSMCE2Q96MF7 247 aa14.1□□□□□ -0.15
COL6A1-201ENST00000361866 OR52B2Q96RD2 323 aa14.1□□□□□ -0.15
COL6A1-201ENST00000361866 MRPS26Q9BYN8 205 aaKnown RBP14.1□□□□□ -0.15
COL6A1-201ENST00000361866 IL22Q9GZX6 179 aa14.1□□□□□ -0.15
COL6A1-201ENST00000361866 RGS18Q9NS28 235 aa14.1□□□□□ -0.15
COL6A1-201ENST00000361866 MORF4L1Q9UBU8 362 aa14.1□□□□□ -0.15
COL6A1-201ENST00000361866 BTRCQ9Y297 605 aa14.1□□□□□ -0.15
COL6A1-201ENST00000361866 PRG3Q9Y2Y8 225 aaPredicted RBP14.1□□□□□ -0.15
COL6A1-201ENST00000361866 TELO2Q9Y4R8 837 aa14.1□□□□□ -0.15
COL6A1-201ENST00000361866 TEX264Q9Y6I9 313 aa14.1□□□□□ -0.15
COL6A1-201ENST00000361866 PRRC2BQ5JSZ5 2229 aaKnown RBP14.09□□□□□ -0.15
COL6A1-201ENST00000361866 PMM2O15305 246 aa14.09□□□□□ -0.15
COL6A1-201ENST00000361866 KATNA1O75449 491 aa14.09□□□□□ -0.15
COL6A1-201ENST00000361866 SLC25A27O95847 323 aa14.09□□□□□ -0.15
COL6A1-201ENST00000361866 F9P00740 461 aa14.09□□□□□ -0.15
COL6A1-201ENST00000361866 OAS1P00973 400 aaKnown RBP14.09□□□□□ -0.15
COL6A1-201ENST00000361866 PIRTP0C851 137 aa14.09□□□□□ -0.15
COL6A1-201ENST00000361866 XRCC1P18887 633 aaPredicted RBP14.09□□□□□ -0.15
COL6A1-201ENST00000361866 SLC18A1P54219 525 aa14.09□□□□□ -0.15
COL6A1-201ENST00000361866 DCAF4L1Q3SXM0 396 aa14.09□□□□□ -0.15
COL6A1-201ENST00000361866 CMASQ8NFW8 434 aaPredicted RBP14.09□□□□□ -0.15
COL6A1-201ENST00000361866 LPGAT1Q92604 370 aa14.09□□□□□ -0.15
COL6A1-201ENST00000361866 SYT11Q9BT88 431 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms