RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 PPP1R3GB7ZBB8 358 aa13.39□□□□□ -0.27
SRGAP3-201ENST00000360413 TRIM3O75382 744 aaPredicted RBP13.39□□□□□ -0.27
SRGAP3-201ENST00000360413 NTSP30990 170 aa13.39□□□□□ -0.27
SRGAP3-201ENST00000360413 UGT1A5P35504 534 aa13.39□□□□□ -0.27
SRGAP3-201ENST00000360413 EMC2Q15006 297 aa13.39□□□□□ -0.27
SRGAP3-201ENST00000360413 ZDHHC17Q8IUH5 632 aa13.39□□□□□ -0.27
SRGAP3-201ENST00000360413 AENQ8WTP8 325 aaKnown RBP13.39□□□□□ -0.27
SRGAP3-201ENST00000360413 EHD4Q9H223 541 aa13.39□□□□□ -0.27
SRGAP3-201ENST00000360413 SMURF2Q9HAU4 748 aa13.39□□□□□ -0.27
SRGAP3-201ENST00000360413 MOV10Q9HCE1 1003 aaKnown RBP13.39□□□□□ -0.27
SRGAP3-201ENST00000360413 TCEA3O75764 348 aa13.39□□□□□ -0.27
SRGAP3-201ENST00000360413 OR56A5P0C7T3 313 aa13.39□□□□□ -0.27
SRGAP3-201ENST00000360413 CAPGP40121 348 aa13.39□□□□□ -0.27
SRGAP3-201ENST00000360413 ARF3P61204 181 aaPredicted RBP13.39□□□□□ -0.27
SRGAP3-201ENST00000360413 ARF1P84077 181 aaKnown RBP13.39□□□□□ -0.27
SRGAP3-201ENST00000360413 DDR1Q08345 913 aa13.39□□□□□ -0.27
SRGAP3-201ENST00000360413 MPP3Q13368 585 aa13.39□□□□□ -0.27
SRGAP3-201ENST00000360413 SCAF8Q9UPN6 1271 aaKnown RBP13.39□□□□□ -0.27
SRGAP3-201ENST00000360413 ERGIC3Q9Y282 383 aa13.39□□□□□ -0.27
SRGAP3-201ENST00000360413 TNPO3Q9Y5L0 923 aaKnown RBP13.39□□□□□ -0.27
SRGAP3-201ENST00000360413 ARHGEF33A8MVX0 844 aa13.39□□□□□ -0.27
SRGAP3-201ENST00000360413 AVILO75366 819 aa13.39□□□□□ -0.27
SRGAP3-201ENST00000360413 DHFRP00374 187 aa13.39□□□□□ -0.27
SRGAP3-201ENST00000360413 HMBSP08397 361 aa13.39□□□□□ -0.27
SRGAP3-201ENST00000360413 MAGP20916 626 aa13.39□□□□□ -0.27
SRGAP3-201ENST00000360413 RAB27AP51159 221 aa13.39□□□□□ -0.27
SRGAP3-201ENST00000360413 EPC2Q52LR7 807 aa13.39□□□□□ -0.27
SRGAP3-201ENST00000360413 FNBP1LQ5T0N5 605 aa13.39□□□□□ -0.27
SRGAP3-201ENST00000360413 RNF220Q5VTB9 566 aa13.39□□□□□ -0.27
SRGAP3-201ENST00000360413 FAM131AQ6UXB0 335 aa13.39□□□□□ -0.27
SRGAP3-201ENST00000360413 KAT2BQ92831 832 aa13.39□□□□□ -0.27
SRGAP3-201ENST00000360413 MED8Q96G25 268 aa13.39□□□□□ -0.27
SRGAP3-201ENST00000360413 RPS6KA6Q9UK32 745 aa13.39□□□□□ -0.27
SRGAP3-201ENST00000360413 EFR3BQ9Y2G0 817 aa13.39□□□□□ -0.27
SRGAP3-201ENST00000360413 PCDHGA10Q9Y5H3 936 aa13.39□□□□□ -0.27
SRGAP3-201ENST00000360413 SAGE2PA6NJ88 616 aa13.39□□□□□ -0.27
SRGAP3-201ENST00000360413 MDM4O15151 490 aa13.39□□□□□ -0.27
SRGAP3-201ENST00000360413 MAP3K6O95382 1288 aa13.39□□□□□ -0.27
SRGAP3-201ENST00000360413 TOP3BO95985 862 aaKnown RBP13.39□□□□□ -0.27
SRGAP3-201ENST00000360413 PGK1P00558 417 aa13.39□□□□□ -0.27
SRGAP3-201ENST00000360413 CES1P23141 567 aa13.39□□□□□ -0.27
SRGAP3-201ENST00000360413 LRRN4CLQ8ND94 238 aa13.39□□□□□ -0.27
SRGAP3-201ENST00000360413 ACOX2Q99424 681 aa13.39□□□□□ -0.27
SRGAP3-201ENST00000360413 OSGEPL1Q9H4B0 414 aa13.39□□□□□ -0.27
SRGAP3-201ENST00000360413 IKZF3Q9UKT9 509 aa13.39□□□□□ -0.27
SRGAP3-201ENST00000360413 ERI2A8K979 691 aaKnown RBP13.38□□□□□ -0.27
SRGAP3-201ENST00000360413 NAB1Q13506 487 aa13.38□□□□□ -0.27
SRGAP3-201ENST00000360413 PKN1Q16512 942 aa13.38□□□□□ -0.27
SRGAP3-201ENST00000360413 PI4K2AQ9BTU6 479 aa13.38□□□□□ -0.27
SRGAP3-201ENST00000360413 AASDHPPTQ9NRN7 309 aa13.38□□□□□ -0.27
SRGAP3-201ENST00000360413 CCNT2O60583 730 aaKnown RBP13.38□□□□□ -0.27
SRGAP3-201ENST00000360413 S100A2P29034 98 aa13.38□□□□□ -0.27
SRGAP3-201ENST00000360413 TNFAIP8L3Q5GJ75 292 aa13.38□□□□□ -0.27
SRGAP3-201ENST00000360413 CXXC5Q7LFL8 322 aaKnown RBP13.38□□□□□ -0.27
SRGAP3-201ENST00000360413 CRISPLD1Q9H336 500 aa13.38□□□□□ -0.27
SRGAP3-201ENST00000360413 RASSF1Q9NS23 344 aa13.38□□□□□ -0.27
SRGAP3-201ENST00000360413 USP18Q9UMW8 372 aa13.38□□□□□ -0.27
SRGAP3-201ENST00000360413 GMPPBQ9Y5P6 360 aa13.38□□□□□ -0.27
SRGAP3-201ENST00000360413 CPSF1Q10570 1443 aaKnown RBP13.38□□□□□ -0.27
SRGAP3-201ENST00000360413 CHURC1-FNTBB4DL54 471 aa13.38□□□□□ -0.27
SRGAP3-201ENST00000360413 NADKO95544 446 aaPredicted RBP13.38□□□□□ -0.27
SRGAP3-201ENST00000360413 HLA-DQA2P01906 255 aa13.38□□□□□ -0.27
SRGAP3-201ENST00000360413 RPS12P25398 132 aaKnown RBP13.38□□□□□ -0.27
SRGAP3-201ENST00000360413 CEBPGP53567 150 aa13.38□□□□□ -0.27
SRGAP3-201ENST00000360413 RNF43Q68DV7 783 aa13.38□□□□□ -0.27
SRGAP3-201ENST00000360413 CLHC1Q8NHS4 586 aa13.38□□□□□ -0.27
SRGAP3-201ENST00000360413 MCFD2Q8NI22 146 aa13.38□□□□□ -0.27
SRGAP3-201ENST00000360413 RASSF5Q8WWW0 418 aa13.38□□□□□ -0.27
SRGAP3-201ENST00000360413 EXO5Q9H790 373 aa13.38□□□□□ -0.27
SRGAP3-201ENST00000360413 TRIM64CA6NLI5 447 aa13.38□□□□□ -0.27
SRGAP3-201ENST00000360413 EPN2O95208 641 aa13.38□□□□□ -0.27
SRGAP3-201ENST00000360413 STAU1O95793 577 aaKnown RBP13.38□□□□□ -0.27
SRGAP3-201ENST00000360413 SERPINA1P01009 418 aa13.38□□□□□ -0.27
SRGAP3-201ENST00000360413 APOC1P02654 83 aa13.38□□□□□ -0.27
SRGAP3-201ENST00000360413 ZNF7P17097 686 aaPredicted RBP13.38□□□□□ -0.27
SRGAP3-201ENST00000360413 CCR3P51677 355 aa13.38□□□□□ -0.27
SRGAP3-201ENST00000360413 EIF2S3LQ2VIR3 472 aaKnown RBP13.38□□□□□ -0.27
SRGAP3-201ENST00000360413 GJD3Q8N144 294 aa13.38□□□□□ -0.27
SRGAP3-201ENST00000360413 ATL1Q8WXF7 558 aa13.38□□□□□ -0.27
SRGAP3-201ENST00000360413 ACOT12Q8WYK0 555 aa13.38□□□□□ -0.27
SRGAP3-201ENST00000360413 TBC1D24Q9ULP9 559 aa13.38□□□□□ -0.27
SRGAP3-201ENST00000360413 RGS14O43566 566 aa13.38□□□□□ -0.27
SRGAP3-201ENST00000360413 SERPINF2P08697 491 aa13.38□□□□□ -0.27
SRGAP3-201ENST00000360413 CYP2C9P11712 490 aa13.38□□□□□ -0.27
SRGAP3-201ENST00000360413 TNK2Q07912 1038 aa13.38□□□□□ -0.27
SRGAP3-201ENST00000360413 PLET1Q6UQ28 207 aa13.38□□□□□ -0.27
SRGAP3-201ENST00000360413 UBA3Q8TBC4 463 aa13.38□□□□□ -0.27
SRGAP3-201ENST00000360413 TRIM2Q9C040 744 aa13.38□□□□□ -0.27
SRGAP3-201ENST00000360413 NARFQ9UHQ1 456 aa13.38□□□□□ -0.27
SRGAP3-201ENST00000360413 SSR3Q9UNL2 185 aa13.38□□□□□ -0.27
SRGAP3-201ENST00000360413 LYVE1Q9Y5Y7 322 aa13.38□□□□□ -0.27
SRGAP3-201ENST00000360413 KMOO15229 486 aa13.38□□□□□ -0.27
SRGAP3-201ENST00000360413 SEPHS1P49903 392 aa13.38□□□□□ -0.27
SRGAP3-201ENST00000360413 NEK3P51956 506 aa13.38□□□□□ -0.27
SRGAP3-201ENST00000360413 CARTPTQ16568 116 aa13.38□□□□□ -0.27
SRGAP3-201ENST00000360413 FAM20CQ8IXL6 584 aa13.38□□□□□ -0.27
SRGAP3-201ENST00000360413 MINDY2Q8NBR6 621 aa13.38□□□□□ -0.27
SRGAP3-201ENST00000360413 DCLK3Q9C098 648 aa13.38□□□□□ -0.27
SRGAP3-201ENST00000360413 A1CFQ9NQ94 594 aaKnown RBP13.38□□□□□ -0.27
SRGAP3-201ENST00000360413 VPS28Q9UK41 221 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms