RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 EFR3BQ9Y2G0 817 aa13.92□□□□□ -0.18
VCP-201ENST00000358901 RAP2CQ9Y3L5 183 aa13.92□□□□□ -0.18
VCP-201ENST00000358901 EME2A4GXA9 379 aaPredicted RBP13.91□□□□□ -0.18
VCP-201ENST00000358901 H7C4K7 107 aa13.91□□□□□ -0.18
VCP-201ENST00000358901 HS6ST1O60243 411 aa13.91□□□□□ -0.18
VCP-201ENST00000358901 ALDH2P05091 517 aa13.91□□□□□ -0.18
VCP-201ENST00000358901 EPHX2P34913 555 aa13.91□□□□□ -0.18
VCP-201ENST00000358901 GPC1P35052 558 aa13.91□□□□□ -0.18
VCP-201ENST00000358901 RAP1GDS1P52306 607 aa13.91□□□□□ -0.18
VCP-201ENST00000358901 ACVR2BQ13705 512 aa13.91□□□□□ -0.18
VCP-201ENST00000358901 C9orf131Q5VYM1 1079 aa13.91□□□□□ -0.18
VCP-201ENST00000358901 PPP4R4Q6NUP7 873 aa13.91□□□□□ -0.18
VCP-201ENST00000358901 ABHD15Q6UXT9 468 aa13.91□□□□□ -0.18
VCP-201ENST00000358901 NUDT18Q6ZVK8 323 aa13.91□□□□□ -0.18
VCP-201ENST00000358901 CPNE8Q86YQ8 564 aa13.91□□□□□ -0.18
VCP-201ENST00000358901 CAMK1DQ8IU85 385 aa13.91□□□□□ -0.18
VCP-201ENST00000358901 PTGR2Q8N8N7 351 aaPredicted RBP13.91□□□□□ -0.18
VCP-201ENST00000358901 SH3BP4Q9P0V3 963 aa13.91□□□□□ -0.18
VCP-201ENST00000358901 MORF4L1Q9UBU8 362 aa13.91□□□□□ -0.18
VCP-201ENST00000358901 AJAP1Q9UKB5 411 aaPredicted RBP13.91□□□□□ -0.18
VCP-201ENST00000358901 RAD51BO15315 384 aa13.91□□□□□ -0.18
VCP-201ENST00000358901 KRT75O95678 551 aa13.91□□□□□ -0.18
VCP-201ENST00000358901 C4BPAP04003 597 aaKnown RBP13.91□□□□□ -0.18
VCP-201ENST00000358901 SNRPB2P08579 225 aaKnown RBP13.91□□□□□ -0.18
VCP-201ENST00000358901 ZNF7P17097 686 aaPredicted RBP13.91□□□□□ -0.18
VCP-201ENST00000358901 ARF4P18085 180 aaPredicted RBP13.91□□□□□ -0.18
VCP-201ENST00000358901 SCNN1GP51170 649 aa13.91□□□□□ -0.18
VCP-201ENST00000358901 BLVRAP53004 296 aa13.91□□□□□ -0.18
VCP-201ENST00000358901 HPCAP84074 193 aa13.91□□□□□ -0.18
VCP-201ENST00000358901 HSDL1Q3SXM5 330 aa13.91□□□□□ -0.18
VCP-201ENST00000358901 RETSATQ6NUM9 610 aa13.91□□□□□ -0.18
VCP-201ENST00000358901 LGI2Q8N0V4 545 aa13.91□□□□□ -0.18
VCP-201ENST00000358901 TERB1Q8NA31 727 aa13.91□□□□□ -0.18
VCP-201ENST00000358901 ITFG1Q8TB96 612 aa13.91□□□□□ -0.18
VCP-201ENST00000358901 MAGEE2Q8TD90 523 aaPredicted RBP13.91□□□□□ -0.18
VCP-201ENST00000358901 EPS8L2Q9H6S3 715 aa13.91□□□□□ -0.18
VCP-201ENST00000358901 PLLPQ9Y342 182 aa13.91□□□□□ -0.18
VCP-201ENST00000358901 LRG1P02750 347 aa13.91□□□□□ -0.18
VCP-201ENST00000358901 MATKP42679 507 aa13.91□□□□□ -0.18
VCP-201ENST00000358901 NEK3P51956 506 aa13.91□□□□□ -0.18
VCP-201ENST00000358901 SLC39A12Q504Y0 691 aa13.91□□□□□ -0.18
VCP-201ENST00000358901 FAM171A1Q5VUB5 890 aa13.91□□□□□ -0.18
VCP-201ENST00000358901 ANKRD22Q5VYY1 191 aa13.91□□□□□ -0.18
VCP-201ENST00000358901 EID3Q8N140 333 aa13.91□□□□□ -0.18
VCP-201ENST00000358901 RBM15BQ8NDT2 890 aaKnown RBP13.91□□□□□ -0.18
VCP-201ENST00000358901 TRPC4APQ8TEL6 797 aa13.91□□□□□ -0.18
VCP-201ENST00000358901 CLPTM1LQ96KA5 538 aa13.91□□□□□ -0.18
VCP-201ENST00000358901 WDR55Q9H6Y2 383 aaPredicted RBP13.91□□□□□ -0.18
VCP-201ENST00000358901 CAB39LQ9H9S4 337 aa13.91□□□□□ -0.18
VCP-201ENST00000358901 PRDM16Q9HAZ2 1276 aa13.91□□□□□ -0.18
VCP-201ENST00000358901 ARHGAP28Q9P2N2 729 aa13.91□□□□□ -0.18
VCP-201ENST00000358901 CORO1CQ9ULV4 474 aaPredicted RBP13.91□□□□□ -0.18
VCP-201ENST00000358901 A0A087X1B8 175 aa13.9□□□□□ -0.18
VCP-201ENST00000358901 C15orf38-AP3S2A0A0A6YYH1 394 aa13.9□□□□□ -0.18
VCP-201ENST00000358901 CNOT3O75175 753 aaKnown RBP13.9□□□□□ -0.18
VCP-201ENST00000358901 C2P06681 752 aa13.9□□□□□ -0.18
VCP-201ENST00000358901 PSEN2P49810 448 aa13.9□□□□□ -0.18
VCP-201ENST00000358901 TAF5Q15542 800 aa13.9□□□□□ -0.18
VCP-201ENST00000358901 ARPINQ7Z6K5 226 aa13.9□□□□□ -0.18
VCP-201ENST00000358901 AMIGO2Q86SJ2 522 aa13.9□□□□□ -0.18
VCP-201ENST00000358901 DNAJB14Q8TBM8 379 aa13.9□□□□□ -0.18
VCP-201ENST00000358901 SPATA16Q9BXB7 569 aa13.9□□□□□ -0.18
VCP-201ENST00000358901 SENP6Q9GZR1 1112 aaPredicted RBP13.9□□□□□ -0.18
VCP-201ENST00000358901 POLR1EQ9GZS1 481 aaKnown RBP13.9□□□□□ -0.18
VCP-201ENST00000358901 CLDN5O00501 218 aa13.9□□□□□ -0.18
VCP-201ENST00000358901 HOXB8P17481 243 aaPredicted RBP13.9□□□□□ -0.18
VCP-201ENST00000358901 CHRNB2P17787 502 aa13.9□□□□□ -0.18
VCP-201ENST00000358901 CD86P42081 329 aa13.9□□□□□ -0.18
VCP-201ENST00000358901 SLC16A1P53985 500 aa13.9□□□□□ -0.18
VCP-201ENST00000358901 BEX3Q00994 111 aa13.9□□□□□ -0.18
VCP-201ENST00000358901 FSTL1Q12841 308 aa13.9□□□□□ -0.18
VCP-201ENST00000358901 IL27RAQ6UWB1 636 aa13.9□□□□□ -0.18
VCP-201ENST00000358901 GPSM1Q86YR5 675 aa13.9□□□□□ -0.18
VCP-201ENST00000358901 LHX5Q9H2C1 402 aa13.9□□□□□ -0.18
VCP-201ENST00000358901 DENND2DQ9H6A0 471 aaPredicted RBP13.9□□□□□ -0.18
VCP-201ENST00000358901 GBA2Q9HCG7 927 aaPredicted RBP13.9□□□□□ -0.18
VCP-201ENST00000358901 MRC1P22897 1456 aa13.9□□□□□ -0.18
VCP-201ENST00000358901 ZNF862O60290 1169 aa13.9□□□□□ -0.18
VCP-201ENST00000358901 ATG7O95352 703 aa13.9□□□□□ -0.18
VCP-201ENST00000358901 ETS2P15036 469 aa13.9□□□□□ -0.18
VCP-201ENST00000358901 PBLDP30039 288 aaPredicted RBP13.9□□□□□ -0.18
VCP-201ENST00000358901 CHI3L1P36222 383 aaPredicted RBP13.9□□□□□ -0.18
VCP-201ENST00000358901 MAPK11Q15759 364 aa13.9□□□□□ -0.18
VCP-201ENST00000358901 ZNF284Q2VY69 593 aa13.9□□□□□ -0.18
VCP-201ENST00000358901 FNBP1LQ5T0N5 605 aa13.9□□□□□ -0.18
VCP-201ENST00000358901 B3GNT6Q6ZMB0 384 aa13.9□□□□□ -0.18
VCP-201ENST00000358901 TMEM86AQ8N2M4 240 aa13.9□□□□□ -0.18
VCP-201ENST00000358901 RORBQ92753 470 aa13.9□□□□□ -0.18
VCP-201ENST00000358901 ASB2Q96Q27 587 aa13.9□□□□□ -0.18
VCP-201ENST00000358901 MARCH2Q9P0N8 246 aa13.9□□□□□ -0.18
VCP-201ENST00000358901 ANAPC2Q9UJX6 822 aa13.9□□□□□ -0.18
VCP-201ENST00000358901 EGFRP00533 1210 aa13.9□□□□□ -0.19
VCP-201ENST00000358901 RPL5P46777 297 aaKnown RBP13.9□□□□□ -0.19
VCP-201ENST00000358901 KPNA1P52294 538 aaPredicted RBP13.9□□□□□ -0.19
VCP-201ENST00000358901 BFSP2Q13515 415 aa13.9□□□□□ -0.19
VCP-201ENST00000358901 DCTN2Q13561 401 aaKnown RBP13.9□□□□□ -0.19
VCP-201ENST00000358901 BOP1Q14137 746 aaKnown RBP13.9□□□□□ -0.19
VCP-201ENST00000358901 GSTA3Q16772 222 aa13.9□□□□□ -0.19
VCP-201ENST00000358901 MAP1SQ66K74 1059 aaPredicted RBP13.9□□□□□ -0.19
VCP-201ENST00000358901 PLPPR4Q7Z2D5 763 aa13.9□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms