RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 PAN2Q504Q3 1202 aaKnown RBP13.02□□□□□ -0.32
SMC4-202ENST00000357388 PLET1Q6UQ28 207 aa13.02□□□□□ -0.32
SMC4-202ENST00000357388 COMMD2Q86X83 199 aa13.02□□□□□ -0.32
SMC4-202ENST00000357388 TRPV3Q8NET8 790 aa13.02□□□□□ -0.32
SMC4-202ENST00000357388 METTL6Q8TCB7 284 aa13.02□□□□□ -0.32
SMC4-202ENST00000357388 RFT1Q96AA3 541 aa13.02□□□□□ -0.32
SMC4-202ENST00000357388 VAT1Q99536 393 aa13.02□□□□□ -0.32
SMC4-202ENST00000357388 POMKQ9H5K3 350 aa13.02□□□□□ -0.32
SMC4-202ENST00000357388 SNX8Q9Y5X2 465 aa13.02□□□□□ -0.32
SMC4-202ENST00000357388 DUSP10Q9Y6W6 482 aa13.02□□□□□ -0.32
SMC4-202ENST00000357388 SLC12A8A0AV02 714 aa13.02□□□□□ -0.33
SMC4-202ENST00000357388 PLK4O00444 970 aa13.02□□□□□ -0.33
SMC4-202ENST00000357388 APOC1P02654 83 aa13.02□□□□□ -0.33
SMC4-202ENST00000357388 SERPINA6P08185 405 aa13.02□□□□□ -0.33
SMC4-202ENST00000357388 DPEP1P16444 411 aa13.02□□□□□ -0.33
SMC4-202ENST00000357388 RPL3P39023 403 aaKnown RBP13.02□□□□□ -0.33
SMC4-202ENST00000357388 NFIAQ12857 509 aa13.02□□□□□ -0.33
SMC4-202ENST00000357388 ZNF549Q6P9A3 640 aa13.02□□□□□ -0.33
SMC4-202ENST00000357388 ZNF571Q7Z3V5 609 aaPredicted RBP13.02□□□□□ -0.33
SMC4-202ENST00000357388 FAM20CQ8IXL6 584 aa13.02□□□□□ -0.33
SMC4-202ENST00000357388 ADGRF2Q8IZF7 708 aa13.02□□□□□ -0.33
SMC4-202ENST00000357388 ARL10Q8N8L6 244 aa13.02□□□□□ -0.33
SMC4-202ENST00000357388 RDH11Q8TC12 318 aa13.02□□□□□ -0.33
SMC4-202ENST00000357388 BHMTQ93088 406 aa13.02□□□□□ -0.33
SMC4-202ENST00000357388 PI4K2AQ9BTU6 479 aa13.02□□□□□ -0.33
SMC4-202ENST00000357388 LACRTQ9GZZ8 138 aa13.02□□□□□ -0.33
SMC4-202ENST00000357388 GBA2Q9HCG7 927 aaPredicted RBP13.02□□□□□ -0.33
SMC4-202ENST00000357388 TLR8Q9NR97 1041 aaKnown RBP13.02□□□□□ -0.33
SMC4-202ENST00000357388 TRMT13Q9NUP7 481 aaKnown RBP13.02□□□□□ -0.33
SMC4-202ENST00000357388 ERI2A8K979 691 aaKnown RBP13.02□□□□□ -0.33
SMC4-202ENST00000357388 CCNE2O96020 404 aa13.02□□□□□ -0.33
SMC4-202ENST00000357388 ZNF7P17097 686 aaPredicted RBP13.02□□□□□ -0.33
SMC4-202ENST00000357388 OMPP47874 163 aa13.02□□□□□ -0.33
SMC4-202ENST00000357388 RPL19P84098 196 aaKnown RBP13.02□□□□□ -0.33
SMC4-202ENST00000357388 CBX3Q13185 183 aa13.02□□□□□ -0.33
SMC4-202ENST00000357388 RNF19BQ6ZMZ0 732 aa13.02□□□□□ -0.33
SMC4-202ENST00000357388 OFCC1Q8IZS5 231 aa13.02□□□□□ -0.33
SMC4-202ENST00000357388 MEIOBQ8N635 442 aa13.02□□□□□ -0.33
SMC4-202ENST00000357388 ACMSDQ8TDX5 336 aa13.02□□□□□ -0.33
SMC4-202ENST00000357388 ARHGAP20Q9P2F6 1191 aa13.02□□□□□ -0.33
SMC4-202ENST00000357388 POLR1DQ9Y2S0 133 aa13.02□□□□□ -0.33
SMC4-202ENST00000357388 LOC110117498-PIK3R3F6TDL0 507 aa13.02□□□□□ -0.33
SMC4-202ENST00000357388 GNB5O14775 395 aa13.02□□□□□ -0.33
SMC4-202ENST00000357388 NADKO95544 446 aaPredicted RBP13.02□□□□□ -0.33
SMC4-202ENST00000357388 RASA1P20936 1047 aa13.02□□□□□ -0.33
SMC4-202ENST00000357388 CYP2F1P24903 491 aa13.02□□□□□ -0.33
SMC4-202ENST00000357388 OLFML2AQ68BL7 652 aa13.02□□□□□ -0.33
SMC4-202ENST00000357388 CAMKK1Q8N5S9 505 aa13.02□□□□□ -0.33
SMC4-202ENST00000357388 MCFD2Q8NI22 146 aa13.02□□□□□ -0.33
SMC4-202ENST00000357388 ACTL9Q8TC94 416 aa13.02□□□□□ -0.33
SMC4-202ENST00000357388 TAAR1Q96RJ0 339 aa13.02□□□□□ -0.33
SMC4-202ENST00000357388 MRPL9Q9BYD2 267 aaKnown RBP13.02□□□□□ -0.33
SMC4-202ENST00000357388 KLK14Q9P0G3 267 aa13.02□□□□□ -0.33
SMC4-202ENST00000357388 RAB26Q9ULW5 256 aa13.02□□□□□ -0.33
SMC4-202ENST00000357388 ZNF609O15014 1411 aa13.01□□□□□ -0.33
SMC4-202ENST00000357388 PRLP01236 227 aa13.01□□□□□ -0.33
SMC4-202ENST00000357388 CHRNGP07510 517 aa13.01□□□□□ -0.33
SMC4-202ENST00000357388 EPC2Q52LR7 807 aa13.01□□□□□ -0.33
SMC4-202ENST00000357388 CHPFQ8IZ52 775 aa13.01□□□□□ -0.33
SMC4-202ENST00000357388 GSDMCQ9BYG8 508 aa13.01□□□□□ -0.33
SMC4-202ENST00000357388 TMEM39BQ9GZU3 492 aa13.01□□□□□ -0.33
SMC4-202ENST00000357388 MORF4L1Q9UBU8 362 aa13.01□□□□□ -0.33
SMC4-202ENST00000357388 FBXL21Q9UKT6 434 aa13.01□□□□□ -0.33
SMC4-202ENST00000357388 SLC12A4Q9UP95 1085 aa13.01□□□□□ -0.33
SMC4-202ENST00000357388 SASH3O75995 380 aa13.01□□□□□ -0.33
SMC4-202ENST00000357388 THRBP10828 461 aa13.01□□□□□ -0.33
SMC4-202ENST00000357388 PRG2P13727 222 aa13.01□□□□□ -0.33
SMC4-202ENST00000357388 IL18R1Q13478 541 aa13.01□□□□□ -0.33
SMC4-202ENST00000357388 ZNF34Q8IZ26 560 aa13.01□□□□□ -0.33
SMC4-202ENST00000357388 LZTR1Q8N653 840 aa13.01□□□□□ -0.33
SMC4-202ENST00000357388 MCOLN3Q8TDD5 553 aa13.01□□□□□ -0.33
SMC4-202ENST00000357388 CSGALNACT1Q8TDX6 532 aa13.01□□□□□ -0.33
SMC4-202ENST00000357388 SIK3Q9Y2K2 1263 aa13.01□□□□□ -0.33
SMC4-202ENST00000357388 NR2E3Q9Y5X4 410 aa13.01□□□□□ -0.33
SMC4-202ENST00000357388 ABCA8O94911 1581 aa13.01□□□□□ -0.33
SMC4-202ENST00000357388 ARHGEF33A8MVX0 844 aa13.01□□□□□ -0.33
SMC4-202ENST00000357388 KRT36O76013 467 aa13.01□□□□□ -0.33
SMC4-202ENST00000357388 EIF2S3P41091 472 aaKnown RBP13.01□□□□□ -0.33
SMC4-202ENST00000357388 PDK4Q16654 411 aa13.01□□□□□ -0.33
SMC4-202ENST00000357388 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.01□□□□□ -0.33
SMC4-202ENST00000357388 CRISPLD1Q9H336 500 aa13.01□□□□□ -0.33
SMC4-202ENST00000357388 SP140LQ9H930 580 aa13.01□□□□□ -0.33
SMC4-202ENST00000357388 ANGPT4Q9Y264 503 aa13.01□□□□□ -0.33
SMC4-202ENST00000357388 A0A087WZ62 844 aa13.01□□□□□ -0.33
SMC4-202ENST00000357388 A0A088AWK7 358 aa13.01□□□□□ -0.33
SMC4-202ENST00000357388 UBE2Q2LH0YL09 131 aa13.01□□□□□ -0.33
SMC4-202ENST00000357388 STX16-NPEPL1H3BU86 382 aa13.01□□□□□ -0.33
SMC4-202ENST00000357388 STX16O14662 325 aa13.01□□□□□ -0.33
SMC4-202ENST00000357388 UGT2B11O75310 529 aa13.01□□□□□ -0.33
SMC4-202ENST00000357388 STAU1O95793 577 aaKnown RBP13.01□□□□□ -0.33
SMC4-202ENST00000357388 ZNF10P21506 573 aaPredicted RBP13.01□□□□□ -0.33
SMC4-202ENST00000357388 RRM1P23921 792 aa13.01□□□□□ -0.33
SMC4-202ENST00000357388 ADRA1DP25100 572 aa13.01□□□□□ -0.33
SMC4-202ENST00000357388 GRIA3P42263 894 aa13.01□□□□□ -0.33
SMC4-202ENST00000357388 PKNOX1P55347 436 aa13.01□□□□□ -0.33
SMC4-202ENST00000357388 PPIL2Q13356 520 aa13.01□□□□□ -0.33
SMC4-202ENST00000357388 RABL6Q3YEC7 729 aaPredicted RBP13.01□□□□□ -0.33
SMC4-202ENST00000357388 TTMPQ5BVD1 217 aa13.01□□□□□ -0.33
SMC4-202ENST00000357388 EGFLAMQ63HQ2 1017 aa13.01□□□□□ -0.33
SMC4-202ENST00000357388 SLCO6A1Q86UG4 719 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms