RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 PLEKHA5Q9HAU0 1116 aa15.99■□□□□ 0.15
RTN3-205ENST00000356000 MKNK2Q9HBH9 465 aa15.99■□□□□ 0.15
RTN3-205ENST00000356000 CD320Q9NPF0 282 aa15.99■□□□□ 0.15
RTN3-205ENST00000356000 NMRK2Q9NPI5 230 aa15.99■□□□□ 0.15
RTN3-205ENST00000356000 HOMER2Q9NSB8 354 aa15.99■□□□□ 0.15
RTN3-205ENST00000356000 hCG_1984214I3L0E3 225 aa15.99■□□□□ 0.15
RTN3-205ENST00000356000 BCAS1O75363 584 aaPredicted RBP15.99■□□□□ 0.15
RTN3-205ENST00000356000 CCNKO75909 580 aa15.99■□□□□ 0.15
RTN3-205ENST00000356000 BMP4P12644 408 aa15.99■□□□□ 0.15
RTN3-205ENST00000356000 PRKACAP17612 351 aa15.99■□□□□ 0.15
RTN3-205ENST00000356000 RPL10AP62906 217 aaKnown RBP15.99■□□□□ 0.15
RTN3-205ENST00000356000 STXBP5Q5T5C0 1151 aa15.99■□□□□ 0.15
RTN3-205ENST00000356000 GALNT7Q86SF2 657 aa15.99■□□□□ 0.15
RTN3-205ENST00000356000 SHC3Q92529 594 aa15.99■□□□□ 0.15
RTN3-205ENST00000356000 TOP1MTQ969P6 601 aa15.99■□□□□ 0.15
RTN3-205ENST00000356000 NRBF2Q96F24 287 aa15.99■□□□□ 0.15
RTN3-205ENST00000356000 CFAP36Q96G28 342 aa15.99■□□□□ 0.15
RTN3-205ENST00000356000 VCPIP1Q96JH7 1222 aa15.99■□□□□ 0.15
RTN3-205ENST00000356000 KREMEN1Q96MU8 473 aa15.99■□□□□ 0.15
RTN3-205ENST00000356000 PKD2L2Q9NZM6 624 aa15.99■□□□□ 0.15
RTN3-205ENST00000356000 KCND2Q9NZV8 630 aa15.99■□□□□ 0.15
RTN3-205ENST00000356000 TEX264Q9Y6I9 313 aa15.99■□□□□ 0.15
RTN3-205ENST00000356000 ANKRD31Q8N7Z5 1873 aa15.99■□□□□ 0.15
RTN3-205ENST00000356000 SRCAPQ6ZRS2 3230 aa15.99■□□□□ 0.15
RTN3-205ENST00000356000 SCN4AP35499 1836 aa15.99■□□□□ 0.15
RTN3-205ENST00000356000 ISPDA4D126 451 aa15.98■□□□□ 0.15
RTN3-205ENST00000356000 USP17L3A6NCW0 530 aa15.98■□□□□ 0.15
RTN3-205ENST00000356000 USP17L4A6NCW7 530 aa15.98■□□□□ 0.15
RTN3-205ENST00000356000 PI4K2BG5E9Z4 385 aa15.98■□□□□ 0.15
RTN3-205ENST00000356000 KCNJ13O60928 360 aa15.98■□□□□ 0.15
RTN3-205ENST00000356000 AKR1B1P15121 316 aa15.98■□□□□ 0.15
RTN3-205ENST00000356000 GRIK1P39086 918 aa15.98■□□□□ 0.15
RTN3-205ENST00000356000 ZNF132P52740 706 aa15.98■□□□□ 0.15
RTN3-205ENST00000356000 MMRN1Q13201 1228 aa15.98■□□□□ 0.15
RTN3-205ENST00000356000 MAPK11Q15759 364 aa15.98■□□□□ 0.15
RTN3-205ENST00000356000 INTS11Q5TA45 600 aaKnown RBP15.98■□□□□ 0.15
RTN3-205ENST00000356000 NDUFAF5Q5TEU4 345 aa15.98■□□□□ 0.15
RTN3-205ENST00000356000 FAXCQ5TGI0 409 aa15.98■□□□□ 0.15
RTN3-205ENST00000356000 FAM122CQ6P4D5 195 aa15.98■□□□□ 0.15
RTN3-205ENST00000356000 ZNF773Q6PK81 442 aa15.98■□□□□ 0.15
RTN3-205ENST00000356000 SMIM5Q71RC9 77 aa15.98■□□□□ 0.15
RTN3-205ENST00000356000 USP17L1Q7RTZ2 530 aa15.98■□□□□ 0.15
RTN3-205ENST00000356000 PTAR1Q7Z6K3 402 aaPredicted RBP15.98■□□□□ 0.15
RTN3-205ENST00000356000 AFG1LQ8WV93 481 aa15.98■□□□□ 0.15
RTN3-205ENST00000356000 HTRA1Q92743 480 aa15.98■□□□□ 0.15
RTN3-205ENST00000356000 FKBP10Q96AY3 582 aa15.98■□□□□ 0.15
RTN3-205ENST00000356000 BTN2A3PQ96KV6 586 aa15.98■□□□□ 0.15
RTN3-205ENST00000356000 MUC3BQ9H195 1237 aa15.98■□□□□ 0.15
RTN3-205ENST00000356000 XPO7Q9UIA9 1087 aaKnown RBP15.98■□□□□ 0.15
RTN3-205ENST00000356000 PCDHGC3Q9UN70 934 aa15.98■□□□□ 0.15
RTN3-205ENST00000356000 TRIM77I1YAP6 450 aa15.98■□□□□ 0.15
RTN3-205ENST00000356000 MFN2O95140 757 aa15.98■□□□□ 0.15
RTN3-205ENST00000356000 GSNP06396 782 aa15.98■□□□□ 0.15
RTN3-205ENST00000356000 ATF7P17544 494 aaPredicted RBP15.98■□□□□ 0.15
RTN3-205ENST00000356000 MX2P20592 715 aa15.98■□□□□ 0.15
RTN3-205ENST00000356000 BST2Q10589 180 aaKnown RBP15.98■□□□□ 0.15
RTN3-205ENST00000356000 ILF2Q12905 390 aaKnown RBP15.98■□□□□ 0.15
RTN3-205ENST00000356000 BMPR2Q13873 1038 aa15.98■□□□□ 0.15
RTN3-205ENST00000356000 IRAK1BP1Q5VVH5 260 aa15.98■□□□□ 0.15
RTN3-205ENST00000356000 LYPD8Q6UX82 237 aa15.98■□□□□ 0.15
RTN3-205ENST00000356000 MFSD7Q6UXD7 560 aa15.98■□□□□ 0.15
RTN3-205ENST00000356000 FAM109AQ8N4B1 249 aa15.98■□□□□ 0.15
RTN3-205ENST00000356000 ZNF384Q8TF68 577 aa15.98■□□□□ 0.15
RTN3-205ENST00000356000 SLA2Q9H6Q3 261 aa15.98■□□□□ 0.15
RTN3-205ENST00000356000 AGPAT3Q9NRZ7 376 aa15.98■□□□□ 0.15
RTN3-205ENST00000356000 PCM1Q15154 2024 aa15.98■□□□□ 0.15
RTN3-205ENST00000356000 CXorf49A8MYA2 514 aaPredicted RBP15.98■□□□□ 0.15
RTN3-205ENST00000356000 GAP43P17677 238 aa15.98■□□□□ 0.15
RTN3-205ENST00000356000 TCN1P20061 433 aaPredicted RBP15.98■□□□□ 0.15
RTN3-205ENST00000356000 ARRB2P32121 409 aa15.98■□□□□ 0.15
RTN3-205ENST00000356000 HARS2P49590 506 aaKnown RBP15.98■□□□□ 0.15
RTN3-205ENST00000356000 SLC13A2Q13183 592 aa15.98■□□□□ 0.15
RTN3-205ENST00000356000 TRIM25Q14258 630 aaKnown RBP15.98■□□□□ 0.15
RTN3-205ENST00000356000 TATDN1Q6P1N9 297 aa15.98■□□□□ 0.15
RTN3-205ENST00000356000 CHST15Q7LFX5 561 aaPredicted RBP15.98■□□□□ 0.15
RTN3-205ENST00000356000 CAMK1DQ8IU85 385 aa15.98■□□□□ 0.15
RTN3-205ENST00000356000 AFAP1L2Q8N4X5 818 aa15.98■□□□□ 0.15
RTN3-205ENST00000356000 FAM156AQ8NDB6 213 aa15.98■□□□□ 0.15
RTN3-205ENST00000356000 SLC35B2Q8TB61 432 aa15.98■□□□□ 0.15
RTN3-205ENST00000356000 FAM20AQ96MK3 541 aa15.98■□□□□ 0.15
RTN3-205ENST00000356000 TMEM246Q9BRR3 403 aa15.98■□□□□ 0.15
RTN3-205ENST00000356000 LHPPQ9H008 270 aa15.98■□□□□ 0.15
RTN3-205ENST00000356000 PDZD7Q9H5P4 517 aa15.98■□□□□ 0.15
RTN3-205ENST00000356000 COG4Q9H9E3 785 aa15.98■□□□□ 0.15
RTN3-205ENST00000356000 VAT1LQ9HCJ6 419 aa15.98■□□□□ 0.15
RTN3-205ENST00000356000 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.98■□□□□ 0.15
RTN3-205ENST00000356000 ZNF221Q9UK13 617 aa15.98■□□□□ 0.15
RTN3-205ENST00000356000 CNOT6Q9ULM6 557 aaKnown RBP15.98■□□□□ 0.15
RTN3-205ENST00000356000 TCRBV3S1A0A5B6 114 aa15.97■□□□□ 0.15
RTN3-205ENST00000356000 UNGP13051 313 aaPredicted RBP15.97■□□□□ 0.15
RTN3-205ENST00000356000 RPL22P35268 128 aaKnown RBP15.97■□□□□ 0.15
RTN3-205ENST00000356000 OR3A3P47888 321 aa15.97■□□□□ 0.15
RTN3-205ENST00000356000 FAM205BPQ63HN1 556 aa15.97■□□□□ 0.15
RTN3-205ENST00000356000 RINT1Q6NUQ1 792 aa15.97■□□□□ 0.15
RTN3-205ENST00000356000 JPH3Q8WXH2 748 aaPredicted RBP15.97■□□□□ 0.15
RTN3-205ENST00000356000 ACO2Q99798 780 aaKnown RBP15.97■□□□□ 0.15
RTN3-205ENST00000356000 TARS2Q9BW92 718 aaKnown RBP15.97■□□□□ 0.15
RTN3-205ENST00000356000 CHID1Q9BWS9 393 aa15.97■□□□□ 0.15
RTN3-205ENST00000356000 RWDD3Q9Y3V2 267 aa15.97■□□□□ 0.15
RTN3-205ENST00000356000 UGT2B11O75310 529 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms