RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 PTGFRNQ9P2B2 879 aa15.08■□□□□ 0
LMX1B-201ENST00000355497 IKZF3Q9UKT9 509 aa15.08■□□□□ 0
LMX1B-201ENST00000355497 SNX6Q9UNH7 406 aa15.08■□□□□ 0
LMX1B-201ENST00000355497 PPIEQ9UNP9 301 aaKnown RBP15.08■□□□□ 0
LMX1B-201ENST00000355497 FAM86B2P0C5J1 330 aa15.08■□□□□ 0
LMX1B-201ENST00000355497 ZNF286BP0CG31 522 aa15.08■□□□□ 0
LMX1B-201ENST00000355497 MMP13P45452 471 aa15.08■□□□□ 0
LMX1B-201ENST00000355497 ELF3P78545 371 aaPredicted RBP15.08■□□□□ 0
LMX1B-201ENST00000355497 MTAPQ13126 283 aa15.08■□□□□ 0
LMX1B-201ENST00000355497 LINC00116Q8NCU8 138 aa15.08■□□□□ 0
LMX1B-201ENST00000355497 CORO2BQ9UQ03 480 aa15.08■□□□□ 0
LMX1B-201ENST00000355497 GMPPBQ9Y5P6 360 aa15.08■□□□□ 0
LMX1B-201ENST00000355497 SGTAO43765 313 aa15.08■□□□□ 0
LMX1B-201ENST00000355497 ERN1O75460 977 aaKnown RBP15.08■□□□□ 0
LMX1B-201ENST00000355497 RGS20O76081 388 aa15.08■□□□□ 0
LMX1B-201ENST00000355497 SLC6A3Q01959 620 aa15.08■□□□□ 0
LMX1B-201ENST00000355497 NFIAQ12857 509 aa15.08■□□□□ 0
LMX1B-201ENST00000355497 DPYSL3Q14195 570 aa15.08■□□□□ 0
LMX1B-201ENST00000355497 FNDC3BQ53EP0 1204 aaKnown RBP15.08■□□□□ 0
LMX1B-201ENST00000355497 AMER2Q8N7J2 671 aa15.08■□□□□ 0
LMX1B-201ENST00000355497 REXO5Q96IC2 774 aaKnown RBP15.08■□□□□ 0
LMX1B-201ENST00000355497 ITGB1BP2Q9UKP3 347 aa15.08■□□□□ 0
LMX1B-201ENST00000355497 ANGPT4Q9Y264 503 aa15.08■□□□□ 0
LMX1B-201ENST00000355497 RWDD3Q9Y3V2 267 aa15.08■□□□□ 0
LMX1B-201ENST00000355497 MAGI3Q5TCQ9 1506 aa15.08■□□□□ 0
LMX1B-201ENST00000355497 SEC24AO95486 1093 aa15.07■□□□□ 0
LMX1B-201ENST00000355497 POMCP01189 267 aa15.07■□□□□ 0
LMX1B-201ENST00000355497 ACAT1P24752 427 aaKnown RBP15.07■□□□□ 0
LMX1B-201ENST00000355497 RPA3P35244 121 aaPredicted RBP15.07■□□□□ 0
LMX1B-201ENST00000355497 SLC26A3P40879 764 aa15.07■□□□□ 0
LMX1B-201ENST00000355497 TTC23Q5W5X9 447 aa15.07■□□□□ 0
LMX1B-201ENST00000355497 ZNF483Q8TF39 744 aaPredicted RBP15.07■□□□□ 0
LMX1B-201ENST00000355497 PLEKHG4BQ96PX9 1271 aa15.07■□□□□ 0
LMX1B-201ENST00000355497 VPS35Q96QK1 796 aa15.07■□□□□ 0
LMX1B-201ENST00000355497 RHBGQ9H310 441 aa15.07■□□□□ 0
LMX1B-201ENST00000355497 KLQ9UEF7 1012 aa15.07■□□□□ 0
LMX1B-201ENST00000355497 DNPEPQ9ULA0 475 aa15.07■□□□□ 0
LMX1B-201ENST00000355497 PCDHA11Q9Y5I1 949 aa15.07■□□□□ 0
LMX1B-201ENST00000355497 CROCC2H7BZ55 1655 aa15.07■□□□□ 0
LMX1B-201ENST00000355497 PSMD11O00231 422 aa15.07■□□□□ 0
LMX1B-201ENST00000355497 LTA4HP09960 611 aaKnown RBP15.07■□□□□ 0
LMX1B-201ENST00000355497 FAM153BP0C7A2 387 aa15.07■□□□□ 0
LMX1B-201ENST00000355497 NPR3P17342 541 aa15.07■□□□□ 0
LMX1B-201ENST00000355497 ADRA1DP25100 572 aa15.07■□□□□ 0
LMX1B-201ENST00000355497 FAM153CQ494X1 144 aa15.07■□□□□ 0
LMX1B-201ENST00000355497 ZNF549Q6P9A3 640 aa15.07■□□□□ 0
LMX1B-201ENST00000355497 ABRAXAS1Q6UWZ7 409 aa15.07■□□□□ 0
LMX1B-201ENST00000355497 USP45Q70EL2 814 aa15.07■□□□□ 0
LMX1B-201ENST00000355497 ING4Q9UNL4 249 aa15.07■□□□□ 0
LMX1B-201ENST00000355497 MTF2Q9Y483 593 aaPredicted RBP15.07■□□□□ 0
LMX1B-201ENST00000355497 KDM6BO15054 1643 aa15.07■□□□□ 0
LMX1B-201ENST00000355497 PAEPP09466 180 aa15.07■□□□□ 0
LMX1B-201ENST00000355497 TLX1P31314 330 aaPredicted RBP15.07■□□□□ 0
LMX1B-201ENST00000355497 USP46P62068 366 aa15.07■□□□□ 0
LMX1B-201ENST00000355497 POLR2LP62875 67 aaKnown RBP15.07■□□□□ 0
LMX1B-201ENST00000355497 ERVK-9P63128 1117 aa15.07■□□□□ 0
LMX1B-201ENST00000355497 RRP1BQ14684 758 aaKnown RBP15.07■□□□□ 0
LMX1B-201ENST00000355497 ALG11Q2TAA5 492 aa15.07■□□□□ 0
LMX1B-201ENST00000355497 ARRDC4Q8NCT1 418 aa15.07■□□□□ 0
LMX1B-201ENST00000355497 TSPAN14Q8NG11 270 aa15.07■□□□□ 0
LMX1B-201ENST00000355497 AENQ8WTP8 325 aaKnown RBP15.07■□□□□ 0
LMX1B-201ENST00000355497 SPATA5L1Q9BVQ7 753 aa15.07■□□□□ 0
LMX1B-201ENST00000355497 ITGA2P17301 1181 aa15.07■□□□□ 0
LMX1B-201ENST00000355497 ATP4AP20648 1035 aa15.07■□□□□ 0
LMX1B-201ENST00000355497 STARP49675 285 aa15.07■□□□□ 0
LMX1B-201ENST00000355497 PGBD2Q6P3X8 592 aa15.07■□□□□ 0
LMX1B-201ENST00000355497 COLGALT2Q8IYK4 626 aa15.07■□□□□ 0
LMX1B-201ENST00000355497 DEFB106AQ8N104 65 aa15.07■□□□□ 0
LMX1B-201ENST00000355497 ACER1Q8TDN7 264 aa15.07■□□□□ 0
LMX1B-201ENST00000355497 UBE2E3Q969T4 207 aa15.07■□□□□ 0
LMX1B-201ENST00000355497 MTMR8Q96EF0 704 aa15.07■□□□□ 0
LMX1B-201ENST00000355497 PGM2Q96G03 612 aa15.07■□□□□ 0
LMX1B-201ENST00000355497 C1QTNF7Q9BXJ2 289 aa15.07■□□□□ 0
LMX1B-201ENST00000355497 ATXN3LQ9H3M9 355 aa15.07■□□□□ 0
LMX1B-201ENST00000355497 PRDM16Q9HAZ2 1276 aa15.07■□□□□ 0
LMX1B-201ENST00000355497 SAE1Q9UBE0 346 aaPredicted RBP15.07■□□□□ 0
LMX1B-201ENST00000355497 ACAP1Q15027 740 aa15.07■□□□□ 0
LMX1B-201ENST00000355497 PARP6Q2NL67 630 aa15.07■□□□□ 0
LMX1B-201ENST00000355497 HYIQ5T013 277 aa15.07■□□□□ 0
LMX1B-201ENST00000355497 METTL7BQ6UX53 244 aa15.07■□□□□ 0
LMX1B-201ENST00000355497 TXNRD3Q86VQ6 643 aa15.07■□□□□ 0
LMX1B-201ENST00000355497 ZC3H7AQ8IWR0 971 aaKnown RBP15.07■□□□□ 0
LMX1B-201ENST00000355497 DEPDC4Q8N2C3 294 aa15.07■□□□□ 0
LMX1B-201ENST00000355497 SELENOMQ8WWX9 145 aa15.07■□□□□ 0
LMX1B-201ENST00000355497 ETNK2Q9NVF9 386 aa15.07■□□□□ 0
LMX1B-201ENST00000355497 UXTQ9UBK9 157 aaPredicted RBP15.07■□□□□ 0
LMX1B-201ENST00000355497 SORCS3Q9UPU3 1222 aa15.07■□□□□ 0
LMX1B-201ENST00000355497 TOB1P50616 345 aaPredicted RBP15.06■□□□□ 0
LMX1B-201ENST00000355497 KCNT2Q6UVM3 1135 aa15.06■□□□□ 0
LMX1B-201ENST00000355497 ZFP28Q8NHY6 868 aa15.06■□□□□ 0
LMX1B-201ENST00000355497 POLR1EQ9GZS1 481 aaKnown RBP15.06■□□□□ 0
LMX1B-201ENST00000355497 ALG9Q9H6U8 611 aa15.06■□□□□ 0
LMX1B-201ENST00000355497 GNPTGQ9UJJ9 305 aa15.06■□□□□ 0
LMX1B-201ENST00000355497 ADCY10Q96PN6 1610 aa15.06■□□□□ 0
LMX1B-201ENST00000355497 MYL9P24844 172 aa15.06■□□□□ 0
LMX1B-201ENST00000355497 ZNF135P52742 658 aaPredicted RBP15.06■□□□□ 0
LMX1B-201ENST00000355497 BACE1P56817 501 aa15.06■□□□□ 0
LMX1B-201ENST00000355497 GRIK4Q16099 956 aa15.06■□□□□ 0
LMX1B-201ENST00000355497 C16orf59Q7L2K0 433 aa15.06■□□□□ 0
LMX1B-201ENST00000355497 SLC41A1Q8IVJ1 513 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms