RNA–Protein interactions for RNA: ENST00000355086.7

SRGAP1-201, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP1, Length 23,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-201ENST00000355086 MROH7Q68CQ1 1323 aa5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 HIST2H2ABQ8IUE6 130 aaPredicted RBP5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 GSAPA4D1B5 854 aa5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 PGAM1P18669 254 aa5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 BPIFB6Q8NFQ5 453 aa5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 ZNHIT2Q9UHR6 403 aa5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 TIMM13Q9Y5L4 95 aaPredicted RBP5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 CCZ1BP86790 482 aa5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 CCZ1P86791 482 aaPredicted RBP5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 MYBPC3Q14896 1274 aa5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 KBTBD7Q8WVZ9 684 aa5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 CAPSLQ8WWF8 208 aa5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 PCDH9Q9HC56 1237 aa5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 OGDHLQ9ULD0 1010 aa5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 TCOF1Q13428 1488 aaKnown RBP5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 EFCAB6Q5THR3 1501 aa5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 ZNF879B4DU55 563 aa5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 CCNYL3P0C7X3 344 aa5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 RPA3P35244 121 aaPredicted RBP5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 ABATP80404 500 aa5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 USP41Q3LFD5 358 aa5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 SPATA20Q8TB22 786 aa5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 GIT1Q9Y2X7 761 aa5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 MYH10P35580 1976 aa5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 A0A087WXM4 84 aa5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 UBE2Q2LH0YL09 131 aa5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 MRASO14807 208 aa5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 CXCL8P10145 99 aa5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 NDST1P52848 882 aa5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 C8orf59Q8N0T1 100 aaPredicted RBP5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 DNAJB3Q8WWF6 145 aa5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 VPS35Q96QK1 796 aa5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 SHOC2Q9UQ13 582 aa5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 AREL1O15033 823 aa5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 NPR3P17342 541 aa5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 RGS1Q08116 209 aa5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 OAFQ86UD1 273 aa5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 BTBD10Q9BSF8 475 aa5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 MLPHQ9BV36 600 aaPredicted RBP5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 CDHR5Q9HBB8 845 aa5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 CCDC177Q9NQR7 707 aaPredicted RBP5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 ANGPT4Q9Y264 503 aa5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 KAT6AQ92794 2004 aa5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 S100A6P06703 90 aa5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 ME2P23368 584 aa5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 TPGS1Q6ZTW0 290 aa5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 KBTBD2Q8IY47 623 aa5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 MAP3K14Q99558 947 aa5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 SEMA6AQ9H2E6 1030 aa5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 CRISPLD1Q9H336 500 aa5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 CCDC162PA2VCL2 907 aa5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 SNX4O95219 450 aa5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 CXCR2P25025 360 aa5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 USP46P62068 366 aa5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 CCSAPQ6IQ19 270 aaPredicted RBP5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 SAMD7Q7Z3H4 446 aa5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 S100A1P23297 94 aa5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 OR7A2PQ8NGA2 310 aa5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 MYCBPAPQ8TBZ2 947 aa5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 FDXACB1Q9BRP7 624 aaPredicted RBP5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 MTG1Q9BT17 334 aaPredicted RBP5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 TEX46H3BTG2 121 aa5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 WRBO00258 174 aa5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 NR2F1P10589 423 aa5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 FAUP35544 74 aaKnown RBP5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 IRF8Q02556 426 aa5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 AMER2Q8N7J2 671 aa5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 MAPRE3Q9UPY8 281 aa5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 A0A0B4J269 797 aa5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 STXBP1P61764 594 aaKnown RBP5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 LZTR1Q8N653 840 aa5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 ZKSCAN4Q969J2 545 aaPredicted RBP5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 ERGIC2Q96RQ1 377 aa5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 SENP6Q9GZR1 1112 aaPredicted RBP5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 CRNNQ9UBG3 495 aaPredicted RBP5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 TSPAN16Q9UKR8 245 aa5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 ADGRL3Q9HAR2 1447 aa5.86□□□□□ -1.47
SRGAP1-201ENST00000355086 C1QTNF3-AMACRE9PGA6 284 aa5.85□□□□□ -1.47
SRGAP1-201ENST00000355086 PLOD3O60568 738 aa5.85□□□□□ -1.47
SRGAP1-201ENST00000355086 PFKFB4Q16877 469 aa5.85□□□□□ -1.47
SRGAP1-201ENST00000355086 ZNF557Q8N988 423 aaPredicted RBP5.85□□□□□ -1.47
SRGAP1-201ENST00000355086 HTR3CQ8WXA8 447 aa5.85□□□□□ -1.47
SRGAP1-201ENST00000355086 CHID1Q9BWS9 393 aa5.85□□□□□ -1.47
SRGAP1-201ENST00000355086 ALDH8A1Q9H2A2 487 aaPredicted RBP5.85□□□□□ -1.47
SRGAP1-201ENST00000355086 MAT2BQ9NZL9 334 aa5.85□□□□□ -1.47
SRGAP1-201ENST00000355086 SERPINA4P29622 427 aa5.85□□□□□ -1.47
SRGAP1-201ENST00000355086 CDK7P50613 346 aa5.85□□□□□ -1.47
SRGAP1-201ENST00000355086 PDX1P52945 283 aa5.85□□□□□ -1.47
SRGAP1-201ENST00000355086 SUZ12Q15022 739 aaKnown RBP5.85□□□□□ -1.47
SRGAP1-201ENST00000355086 MSANTD1Q6ZTZ1 278 aa5.85□□□□□ -1.47
SRGAP1-201ENST00000355086 TCP10LQ8TDR4 215 aa5.85□□□□□ -1.47
SRGAP1-201ENST00000355086 BTBD7Q9P203 1132 aa5.85□□□□□ -1.47
SRGAP1-201ENST00000355086 SAMD9Q5K651 1589 aa5.85□□□□□ -1.47
SRGAP1-201ENST00000355086 MED24O75448 989 aa5.85□□□□□ -1.47
SRGAP1-201ENST00000355086 HSPA14Q0VDF9 509 aa5.85□□□□□ -1.47
SRGAP1-201ENST00000355086 QPRTQ15274 297 aa5.85□□□□□ -1.47
SRGAP1-201ENST00000355086 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.85□□□□□ -1.47
SRGAP1-201ENST00000355086 TC2NQ8N9U0 490 aa5.85□□□□□ -1.47
SRGAP1-201ENST00000355086 WDR60Q8WVS4 1066 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms