RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 BST2Q10589 180 aaKnown RBP11.52□□□□□ -0.56
RTN3-204ENST00000354497 ZSCAN26Q16670 478 aa11.52□□□□□ -0.56
RTN3-204ENST00000354497 ACCSLQ4AC99 568 aa11.52□□□□□ -0.56
RTN3-204ENST00000354497 DCAF6Q58WW2 860 aa11.52□□□□□ -0.56
RTN3-204ENST00000354497 FAM46CQ5VWP2 391 aa11.52□□□□□ -0.56
RTN3-204ENST00000354497 RBM44Q6ZP01 1051 aaKnown RBP11.52□□□□□ -0.56
RTN3-204ENST00000354497 EFL1Q7Z2Z2 1120 aaKnown RBP11.52□□□□□ -0.56
RTN3-204ENST00000354497 SLC9A9Q8IVB4 645 aa11.52□□□□□ -0.56
RTN3-204ENST00000354497 CCDC112Q8NEF3 446 aa11.52□□□□□ -0.56
RTN3-204ENST00000354497 OR8D1Q8WZ84 308 aa11.52□□□□□ -0.56
RTN3-204ENST00000354497 SPAG5Q96R06 1193 aa11.52□□□□□ -0.56
RTN3-204ENST00000354497 IRX2Q9BZI1 471 aaPredicted RBP11.52□□□□□ -0.56
RTN3-204ENST00000354497 KDM4CQ9H3R0 1056 aa11.52□□□□□ -0.56
RTN3-204ENST00000354497 MAGEF1Q9HAY2 307 aa11.52□□□□□ -0.56
RTN3-204ENST00000354497 ANKMY1Q9P2S6 941 aa11.52□□□□□ -0.56
RTN3-204ENST00000354497 SARDHQ9UL12 918 aa11.52□□□□□ -0.56
RTN3-204ENST00000354497 RRP15Q9Y3B9 282 aaKnown RBP11.52□□□□□ -0.56
RTN3-204ENST00000354497 ENTPD2Q9Y5L3 495 aa11.52□□□□□ -0.56
RTN3-204ENST00000354497 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.52□□□□□ -0.57
RTN3-204ENST00000354497 LY6G6EA0A0G2JKS1 128 aa11.52□□□□□ -0.57
RTN3-204ENST00000354497 PVALEFA0A1B0GWK0 134 aa11.52□□□□□ -0.57
RTN3-204ENST00000354497 A0A1W2PQU0 124 aa11.52□□□□□ -0.57
RTN3-204ENST00000354497 ERICH4A6NGS2 130 aa11.52□□□□□ -0.57
RTN3-204ENST00000354497 C1QTNF3-AMACRE9PGA6 284 aa11.52□□□□□ -0.57
RTN3-204ENST00000354497 K7ESM1 405 aa11.52□□□□□ -0.57
RTN3-204ENST00000354497 CALUO43852 315 aaPredicted RBP11.52□□□□□ -0.57
RTN3-204ENST00000354497 COQ9O75208 318 aa11.52□□□□□ -0.57
RTN3-204ENST00000354497 GJB6O95452 261 aa11.52□□□□□ -0.57
RTN3-204ENST00000354497 GIMD1P0DJR0 217 aa11.52□□□□□ -0.57
RTN3-204ENST00000354497 AKT2P31751 481 aa11.52□□□□□ -0.57
RTN3-204ENST00000354497 CLDN2P57739 230 aa11.52□□□□□ -0.57
RTN3-204ENST00000354497 DAOAP59103 153 aa11.52□□□□□ -0.57
RTN3-204ENST00000354497 STK4Q13043 487 aa11.52□□□□□ -0.57
RTN3-204ENST00000354497 ZNF177Q13360 481 aaPredicted RBP11.52□□□□□ -0.57
RTN3-204ENST00000354497 ARL13BQ3SXY8 428 aa11.52□□□□□ -0.57
RTN3-204ENST00000354497 LINC00303Q3SY05 128 aa11.52□□□□□ -0.57
RTN3-204ENST00000354497 ZC3H12AQ5D1E8 599 aaKnown RBP11.52□□□□□ -0.57
RTN3-204ENST00000354497 MS4A13Q5J8X5 152 aa11.52□□□□□ -0.57
RTN3-204ENST00000354497 AGBL4Q5VU57 503 aa11.52□□□□□ -0.57
RTN3-204ENST00000354497 GUSBP11Q6P575 273 aa11.52□□□□□ -0.57
RTN3-204ENST00000354497 SHC4Q6S5L8 630 aa11.52□□□□□ -0.57
RTN3-204ENST00000354497 IGF2-ASQ6U949 168 aa11.52□□□□□ -0.57
RTN3-204ENST00000354497 PTAR1Q7Z6K3 402 aaPredicted RBP11.52□□□□□ -0.57
RTN3-204ENST00000354497 JAMLQ86YT9 394 aa11.52□□□□□ -0.57
RTN3-204ENST00000354497 LGI2Q8N0V4 545 aa11.52□□□□□ -0.57
RTN3-204ENST00000354497 TTC39CQ8N584 583 aa11.52□□□□□ -0.57
RTN3-204ENST00000354497 KIAA0895Q8NCT3 520 aa11.52□□□□□ -0.57
RTN3-204ENST00000354497 DUSP23Q9BVJ7 150 aa11.52□□□□□ -0.57
RTN3-204ENST00000354497 USP29Q9HBJ7 922 aa11.52□□□□□ -0.57
RTN3-204ENST00000354497 TJP2Q9UDY2 1190 aa11.52□□□□□ -0.57
RTN3-204ENST00000354497 U3KQA8 63 aa11.52□□□□□ -0.57
RTN3-204ENST00000354497 TMCO5BA8MYB1 307 aa11.51□□□□□ -0.57
RTN3-204ENST00000354497 PDXKO00764 312 aa11.51□□□□□ -0.57
RTN3-204ENST00000354497 SCAMP1O15126 338 aa11.51□□□□□ -0.57
RTN3-204ENST00000354497 IGLV3-27P01718 113 aa11.51□□□□□ -0.57
RTN3-204ENST00000354497 FAM87AP0C7U9 286 aa11.51□□□□□ -0.57
RTN3-204ENST00000354497 PDGFRAP16234 1089 aa11.51□□□□□ -0.57
RTN3-204ENST00000354497 SYT1P21579 422 aa11.51□□□□□ -0.57
RTN3-204ENST00000354497 DRAP1Q14919 205 aaPredicted RBP11.51□□□□□ -0.57
RTN3-204ENST00000354497 MAP9Q49MG5 647 aa11.51□□□□□ -0.57
RTN3-204ENST00000354497 RAP1GAP2Q684P5 730 aa11.51□□□□□ -0.57
RTN3-204ENST00000354497 OR6B2Q6IFH4 312 aa11.51□□□□□ -0.57
RTN3-204ENST00000354497 MSANTD2Q6P1R3 559 aa11.51□□□□□ -0.57
RTN3-204ENST00000354497 CHSY1Q86X52 802 aa11.51□□□□□ -0.57
RTN3-204ENST00000354497 FAM186BQ8IYM0 893 aa11.51□□□□□ -0.57
RTN3-204ENST00000354497 LINC00301Q8NCQ3 95 aa11.51□□□□□ -0.57
RTN3-204ENST00000354497 WDR36Q8NI36 951 aaKnown RBP11.51□□□□□ -0.57
RTN3-204ENST00000354497 ERCC4Q92889 916 aaPredicted RBP11.51□□□□□ -0.57
RTN3-204ENST00000354497 ZBTB9Q96C00 473 aa11.51□□□□□ -0.57
RTN3-204ENST00000354497 PRR11Q96HE9 360 aaPredicted RBP11.51□□□□□ -0.57
RTN3-204ENST00000354497 NOX5Q96PH1 765 aa11.51□□□□□ -0.57
RTN3-204ENST00000354497 KCTD10Q9H3F6 313 aa11.51□□□□□ -0.57
RTN3-204ENST00000354497 PREBQ9HCU5 417 aa11.51□□□□□ -0.57
RTN3-204ENST00000354497 SEPT3Q9UH03 358 aa11.51□□□□□ -0.57
RTN3-204ENST00000354497 PCDHGA8Q9Y5G5 932 aa11.51□□□□□ -0.57
RTN3-204ENST00000354497 NYNRINQ9P2P1 1898 aaKnown RBP11.51□□□□□ -0.57
RTN3-204ENST00000354497 CDRT15L2A8MXV6 281 aa11.5□□□□□ -0.57
RTN3-204ENST00000354497 H3BM21 787 aa11.5□□□□□ -0.57
RTN3-204ENST00000354497 CUTAO60888 179 aa11.5□□□□□ -0.57
RTN3-204ENST00000354497 HNRNPKP61978 463 aaKnown RBP eCLIP11.5□□□□□ -0.57
RTN3-204ENST00000354497 SKOR1P84550 965 aa11.5□□□□□ -0.57
RTN3-204ENST00000354497 DEFB133Q30KQ1 61 aa11.5□□□□□ -0.57
RTN3-204ENST00000354497 ZCCHC8Q6NZY4 707 aaKnown RBP11.5□□□□□ -0.57
RTN3-204ENST00000354497 INTS8Q75QN2 995 aaKnown RBP11.5□□□□□ -0.57
RTN3-204ENST00000354497 CIR1Q86X95 450 aaPredicted RBP11.5□□□□□ -0.57
RTN3-204ENST00000354497 CEP57L1Q8IYX8 460 aa11.5□□□□□ -0.57
RTN3-204ENST00000354497 ZNF454Q8N9F8 522 aa11.5□□□□□ -0.57
RTN3-204ENST00000354497 TMEM145Q8NBT3 493 aa11.5□□□□□ -0.57
RTN3-204ENST00000354497 CLEC4CQ8WTT0 213 aa11.5□□□□□ -0.57
RTN3-204ENST00000354497 SEMA4DQ92854 862 aa11.5□□□□□ -0.57
RTN3-204ENST00000354497 FCRL2Q96LA5 508 aaPredicted RBP11.5□□□□□ -0.57
RTN3-204ENST00000354497 KRTAP3-3Q9BYR6 98 aa11.5□□□□□ -0.57
RTN3-204ENST00000354497 KRTAP3-2Q9BYR7 98 aa11.5□□□□□ -0.57
RTN3-204ENST00000354497 TMEM8AQ9HCN3 771 aa11.5□□□□□ -0.57
RTN3-204ENST00000354497 CNGB3Q9NQW8 809 aa11.5□□□□□ -0.57
RTN3-204ENST00000354497 STARD5Q9NSY2 213 aa11.5□□□□□ -0.57
RTN3-204ENST00000354497 IPO11Q9UI26 975 aaKnown RBP11.5□□□□□ -0.57
RTN3-204ENST00000354497 SLC25A13Q9UJS0 675 aa11.5□□□□□ -0.57
RTN3-204ENST00000354497 ATXN7L1Q9ULK2 861 aaPredicted RBP11.5□□□□□ -0.57
RTN3-204ENST00000354497 CCDC187A0A096LP49 1063 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms