RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 ZNF284Q2VY69 593 aa16.3■□□□□ 0.2
DDX55-202ENST00000354291 ZCWPW2Q504Y3 356 aa16.3■□□□□ 0.2
DDX55-202ENST00000354291 PERM1Q5SV97 790 aa16.3■□□□□ 0.2
DDX55-202ENST00000354291 MSANTD2Q6P1R3 559 aa16.3■□□□□ 0.2
DDX55-202ENST00000354291 PTAR1Q7Z6K3 402 aaPredicted RBP16.3■□□□□ 0.2
DDX55-202ENST00000354291 LGI2Q8N0V4 545 aa16.3■□□□□ 0.2
DDX55-202ENST00000354291 FBXO39Q8N4B4 442 aa16.3■□□□□ 0.2
DDX55-202ENST00000354291 TTC39CQ8N584 583 aa16.3■□□□□ 0.2
DDX55-202ENST00000354291 ZNF548Q8NEK5 533 aaPredicted RBP16.3■□□□□ 0.2
DDX55-202ENST00000354291 FRS2Q8WU20 508 aa16.3■□□□□ 0.2
DDX55-202ENST00000354291 IFT43Q96FT9 208 aa16.3■□□□□ 0.2
DDX55-202ENST00000354291 SLC25A18Q9H1K4 315 aa16.3■□□□□ 0.2
DDX55-202ENST00000354291 TMEM8AQ9HCN3 771 aa16.3■□□□□ 0.2
DDX55-202ENST00000354291 PPM1HQ9ULR3 514 aa16.3■□□□□ 0.2
DDX55-202ENST00000354291 RP1P56715 2156 aa16.3■□□□□ 0.2
DDX55-202ENST00000354291 CETN3O15182 167 aa16.29■□□□□ 0.2
DDX55-202ENST00000354291 STX10O60499 249 aa16.29■□□□□ 0.2
DDX55-202ENST00000354291 PCDH8O95206 1070 aa16.29■□□□□ 0.2
DDX55-202ENST00000354291 PDGFRAP16234 1089 aa16.29■□□□□ 0.2
DDX55-202ENST00000354291 CYP4F2P78329 520 aa16.29■□□□□ 0.2
DDX55-202ENST00000354291 BST2Q10589 180 aaKnown RBP16.29■□□□□ 0.2
DDX55-202ENST00000354291 KRT39Q6A163 491 aa16.29■□□□□ 0.2
DDX55-202ENST00000354291 GCNT7Q6ZNI0 430 aa16.29■□□□□ 0.2
DDX55-202ENST00000354291 HORMAD1Q86X24 394 aa16.29■□□□□ 0.2
DDX55-202ENST00000354291 FMR1NBQ8N0W7 255 aaPredicted RBP16.29■□□□□ 0.2
DDX55-202ENST00000354291 LMX1AQ8TE12 382 aa16.29■□□□□ 0.2
DDX55-202ENST00000354291 FAXDC2Q96IV6 333 aa16.29■□□□□ 0.2
DDX55-202ENST00000354291 GSDMAQ96QA5 445 aa16.29■□□□□ 0.2
DDX55-202ENST00000354291 GTPBP4Q9BZE4 634 aaKnown RBP16.29■□□□□ 0.2
DDX55-202ENST00000354291 CNGB3Q9NQW8 809 aa16.29■□□□□ 0.2
DDX55-202ENST00000354291 IPO11Q9UI26 975 aaKnown RBP16.29■□□□□ 0.2
DDX55-202ENST00000354291 MAN2B2Q9Y2E5 1009 aa16.29■□□□□ 0.2
DDX55-202ENST00000354291 PLD2O14939 933 aa16.28■□□□□ 0.2
DDX55-202ENST00000354291 SMC2O95347 1197 aa16.28■□□□□ 0.2
DDX55-202ENST00000354291 EPB41P11171 864 aaKnown RBP16.28■□□□□ 0.2
DDX55-202ENST00000354291 CD19P15391 556 aa16.28■□□□□ 0.2
DDX55-202ENST00000354291 RGS7P49802 495 aa16.28■□□□□ 0.2
DDX55-202ENST00000354291 SULT2A1Q06520 285 aa16.28■□□□□ 0.2
DDX55-202ENST00000354291 PNOCQ13519 176 aa16.28■□□□□ 0.2
DDX55-202ENST00000354291 SERINC3Q13530 473 aa16.28■□□□□ 0.2
DDX55-202ENST00000354291 SPIDRQ14159 915 aa16.28■□□□□ 0.2
DDX55-202ENST00000354291 DLG2Q15700 870 aa16.28■□□□□ 0.2
DDX55-202ENST00000354291 SKIDA1Q1XH10 827 aa16.28■□□□□ 0.2
DDX55-202ENST00000354291 MANEAQ5SRI9 462 aa16.28■□□□□ 0.2
DDX55-202ENST00000354291 RAP1GAP2Q684P5 730 aa16.28■□□□□ 0.2
DDX55-202ENST00000354291 ABI3BPQ7Z7G0 1075 aa16.28■□□□□ 0.2
DDX55-202ENST00000354291 DCP2Q8IU60 420 aaKnown RBP16.28■□□□□ 0.2
DDX55-202ENST00000354291 ZSCAN1Q8NBB4 408 aa16.28■□□□□ 0.2
DDX55-202ENST00000354291 SEMA4DQ92854 862 aa16.28■□□□□ 0.2
DDX55-202ENST00000354291 FCRL2Q96LA5 508 aaPredicted RBP16.28■□□□□ 0.2
DDX55-202ENST00000354291 IL12RB2Q99665 862 aa16.28■□□□□ 0.2
DDX55-202ENST00000354291 EPB41L5Q9HCM4 733 aa16.28■□□□□ 0.2
DDX55-202ENST00000354291 XPO7Q9UIA9 1087 aaKnown RBP16.28■□□□□ 0.2
DDX55-202ENST00000354291 HOOK1Q9UJC3 728 aaKnown RBP16.28■□□□□ 0.2
DDX55-202ENST00000354291 SALL4Q9UJQ4 1053 aa16.28■□□□□ 0.2
DDX55-202ENST00000354291 CSNK1G3Q9Y6M4 447 aa16.28■□□□□ 0.2
DDX55-202ENST00000354291 A6NNZ2 444 aa16.27■□□□□ 0.2
DDX55-202ENST00000354291 H3BM21 787 aa16.27■□□□□ 0.2
DDX55-202ENST00000354291 MCF2LO15068 1137 aa16.27■□□□□ 0.2
DDX55-202ENST00000354291 AQP9O43315 295 aa16.27■□□□□ 0.2
DDX55-202ENST00000354291 CSF2P04141 144 aa16.27■□□□□ 0.2
DDX55-202ENST00000354291 UGT1A5P35504 534 aa16.27■□□□□ 0.2
DDX55-202ENST00000354291 PRCPP42785 496 aa16.27■□□□□ 0.2
DDX55-202ENST00000354291 FZD2Q14332 565 aa16.27■□□□□ 0.2
DDX55-202ENST00000354291 CLCA4Q14CN2 919 aa16.27■□□□□ 0.2
DDX55-202ENST00000354291 COBLL1Q53SF7 1204 aa16.27■□□□□ 0.2
DDX55-202ENST00000354291 PIP5KL1Q5T9C9 394 aa16.27■□□□□ 0.2
DDX55-202ENST00000354291 ZNF658Q5TYW1 1059 aaPredicted RBP16.27■□□□□ 0.2
DDX55-202ENST00000354291 NEK5Q6P3R8 708 aa16.27■□□□□ 0.2
DDX55-202ENST00000354291 Q6ZVU0 165 aa16.27■□□□□ 0.2
DDX55-202ENST00000354291 RAB11FIP2Q7L804 512 aa16.27■□□□□ 0.2
DDX55-202ENST00000354291 VASH2Q86V25 355 aa16.27■□□□□ 0.2
DDX55-202ENST00000354291 SMYD4Q8IYR2 804 aaPredicted RBP16.27■□□□□ 0.2
DDX55-202ENST00000354291 FBXL13Q8NEE6 735 aa16.27■□□□□ 0.2
DDX55-202ENST00000354291 KCTD13Q8WZ19 329 aa16.27■□□□□ 0.2
DDX55-202ENST00000354291 BMFQ96LC9 184 aa16.27■□□□□ 0.2
DDX55-202ENST00000354291 TSG101Q99816 390 aa16.27■□□□□ 0.2
DDX55-202ENST00000354291 CCDC3Q9BQI4 270 aa16.27■□□□□ 0.2
DDX55-202ENST00000354291 GEMIN8Q9NWZ8 242 aaKnown RBP16.27■□□□□ 0.2
DDX55-202ENST00000354291 SEPT10Q9P0V9 454 aa16.27■□□□□ 0.2
DDX55-202ENST00000354291 PCDHGA7Q9Y5G6 932 aa16.27■□□□□ 0.2
DDX55-202ENST00000354291 AGRPO00253 132 aa16.26■□□□□ 0.19
DDX55-202ENST00000354291 KPNA3O00505 521 aaPredicted RBP16.26■□□□□ 0.19
DDX55-202ENST00000354291 LTFP02788 710 aa16.26■□□□□ 0.19
DDX55-202ENST00000354291 HGFP14210 728 aa16.26■□□□□ 0.19
DDX55-202ENST00000354291 JUNDP17535 347 aa16.26■□□□□ 0.19
DDX55-202ENST00000354291 RPIAP49247 311 aa16.26■□□□□ 0.19
DDX55-202ENST00000354291 PDX1P52945 283 aa16.26■□□□□ 0.19
DDX55-202ENST00000354291 FKBP3Q00688 224 aaKnown RBP16.26■□□□□ 0.19
DDX55-202ENST00000354291 MAPK8IP2Q13387 824 aaPredicted RBP16.26■□□□□ 0.19
DDX55-202ENST00000354291 SLC12A1Q13621 1099 aa16.26■□□□□ 0.19
DDX55-202ENST00000354291 SEL1L3Q68CR1 1132 aa16.26■□□□□ 0.19
DDX55-202ENST00000354291 CHSY1Q86X52 802 aa16.26■□□□□ 0.19
DDX55-202ENST00000354291 CIR1Q86X95 450 aaPredicted RBP16.26■□□□□ 0.19
DDX55-202ENST00000354291 WDR48Q8TAF3 677 aa16.26■□□□□ 0.19
DDX55-202ENST00000354291 CLEC4CQ8WTT0 213 aa16.26■□□□□ 0.19
DDX55-202ENST00000354291 GLMNQ92990 594 aa16.26■□□□□ 0.19
DDX55-202ENST00000354291 EEF2KMTQ96G04 330 aa16.26■□□□□ 0.19
DDX55-202ENST00000354291 TIGD1Q96MW7 591 aa16.26■□□□□ 0.19
DDX55-202ENST00000354291 EPN3Q9H201 632 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms